Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07936 Brassica carinata HOM05D009405 ORTHO05D011711 2.6e-68 261.9 131 100.0
BcaC09g50939 Brassica carinata HOM05D009405 ORTHO05D011711 1.5e-55 219.5 128 85.2
BcaC08g43906 Brassica carinata HOM05D009405 ORTHO05D011711 2.9e-51 205.3 116 86.2
BcaC07g37532 Brassica carinata HOM05D009405 ORTHO05D011711 5.4e-50 201.1 114 87.7
BcaC05g25372 Brassica carinata HOM05D009405 ORTHO05D011711 2.8e-38 162.2 116 71.6
BraA03t15640Z Brassica rapa HOM05D009405 ORTHO05D011711 2.8e-38 162.2 118 71.2
BcaB07g33476 Brassica carinata HOM05D009405 ORTHO05D011711 3.1e-37 158.7 116 72.4
A04p10550 Brassica napus HOM05D009405 ORTHO05D011711 2.6e-28 129.0 134 56.7
C08p12840 Brassica napus HOM05D009405 ORTHO05D011711 2.6e-28 129.0 132 56.8
A02p25740 Brassica napus HOM05D009405 ORTHO05D011711 6.7e-24 114.4 134 44.8
A03p65880 Brassica napus HOM05D009405 ORTHO05D011711 9.6e-23 110.5 123 53.7
BolC7t41126H Brassica oleracea HOM05D009405 ORTHO05D011711 2.8e-22 109.0 112 52.7
BcaC07g37156 Brassica carinata HOM05D009405 ORTHO05D011711 1.1e-21 107.1 74 74.3
C05p29580 Brassica napus HOM05D009405 ORTHO05D011711 4.0e-21 105.1 75 73.3
C03p67690 Brassica napus HOM05D009405 ORTHO05D011711 1.9e-18 96.3 89 58.4
C05p50120 Brassica napus HOM05D009405 ORTHO05D011711 4.2e-18 95.1 129 44.2
BolSC21t60228H Brassica oleracea HOM05D009405 ORTHO05D011711 4.2e-18 95.1 107 51.4
A09p41400 Brassica napus HOM05D014165 ORTHO05D016792 1.6e-17 93.2 141 41.1
C04p37730 Brassica napus HOM05D000305 ORTHO05D000065 7.4e-15 84.3 134 36.6
C07p51450 Brassica napus HOM05D000305 ORTHO05D000065 3.7e-14 82.0 134 35.8
BraA04t16453Z Brassica rapa HOM05D010193 ORTHO05D012632 8.2e-14 80.9 138 37.0
A04p07620 Brassica napus HOM05D010193 ORTHO05D012632 1.4e-13 80.1 138 36.2
C09p33570 Brassica napus HOM05D009405 ORTHO05D011711 1.4e-13 80.1 75 52.0
A09p36280 Brassica napus HOM05D010193 ORTHO05D012632 1.8e-13 79.7 138 36.2
C09p62570 Brassica napus HOM05D009405 ORTHO05D011711 4.1e-13 78.6 80 51.2
BraA02t08976Z Brassica rapa HOM05D010193 ORTHO05D012632 5.3e-13 78.2 127 37.0
A05p35590 Brassica napus HOM05D009405 ORTHO05D011711 1.5e-12 76.6 74 51.4
C02p13250 Brassica napus HOM05D009405 ORTHO05D011711 5.9e-12 74.7 54 63.0
A07p43080 Brassica napus HOM05D009405 ORTHO05D011711 1.3e-11 73.6 73 52.1
A09p23990 Brassica napus HOM05D009405 ORTHO05D011711 2.2e-11 72.8 97 47.4
BcaB07g31690 Brassica carinata HOM05D000305 ORTHO05D000065 6.5e-11 71.2 137 34.3
BcaC06g34455 Brassica carinata HOM05D010193 ORTHO05D012632 9.3e-10 67.4 127 32.3
BcaC03g17448 Brassica carinata HOM05D010193 ORTHO05D012632 1.2e-09 67.0 120 34.2
BolC4t23236H Brassica oleracea HOM05D010193 ORTHO05D012632 1.2e-09 67.0 127 33.9
BolC5t31340H Brassica oleracea HOM05D009405 ORTHO05D011711 2.7e-09 65.9 68 45.6
C07p07070 Brassica napus HOM05D009405 ORTHO05D011711 3.5e-09 65.5 109 38.5
BraA03t15375Z Brassica rapa HOM05D010193 ORTHO05D012632 7.9e-09 64.3 127 31.5
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 5.1e-08 61.6 108 35.2
BraA09t37462Z Brassica rapa HOM05D009405 ORTHO05D011711 5.7e-07 58.2 87 41.4
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 7.4e-07 57.8 122 31.1
BcaC08g45658 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.0 68 39.7
C06p34140 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.0 68 39.7
BcaB07g31691 Brassica carinata HOM05D010193 ORTHO05D012632 2.2e-06 56.2 66 43.9
BcaB07g31692 Brassica carinata HOM05D010193 ORTHO05D012632 2.2e-06 56.2 66 43.9
BcaC04g19021 Brassica carinata HOM05D014165 ORTHO05D016792 2.8e-06 55.8 122 32.0
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 3.7e-06 55.5 66 39.4
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.1 66 39.4
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.1 66 39.4
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 4.8e-06 55.1 66 39.4
BcaC08g45073 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-06 54.7 119 29.4
BcaC09g51392 Brassica carinata HOM05D019666 ORTHO05D039882 8.2e-06 54.3 61 39.3
C01p13630 Brassica napus HOM05D019666 ORTHO05D039882 8.2e-06 54.3 61 39.3


User provided reference genes

Program Settings