Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 8.3e-88 327.0 167 100.0
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 8.3e-88 327.0 167 100.0
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 5.4e-87 324.3 167 98.8
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 4.6e-86 321.2 167 97.0
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.0e-85 320.1 167 97.6
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.4e-82 309.7 167 94.6
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 8.4e-80 300.4 167 91.0
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 2.1e-75 285.8 167 87.4
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.1e-66 256.9 167 79.0
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.4e-66 256.5 167 80.8
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.4e-66 256.5 167 80.8
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 3.1e-66 255.4 167 78.4
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 9.9e-65 250.4 167 77.2
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 4.0e-58 228.4 167 69.5
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.2e-43 177.6 173 57.8
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 1.8e-42 176.4 112 76.8
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 6.9e-42 174.5 176 57.4
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.6e-41 172.6 110 75.5
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 6.5e-40 167.9 118 71.2
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 3.2e-39 165.6 131 64.9
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 3.2e-39 165.6 154 55.2
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 3.2e-39 165.6 130 64.6
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 3.6e-38 162.2 109 74.3
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 4.6e-38 161.8 112 71.4
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.4e-37 160.2 173 54.3
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.8e-37 159.8 161 53.4
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 1.8e-37 159.8 128 65.6
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 3.0e-37 159.1 120 66.7
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 8.8e-37 157.5 93 79.6
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 8.8e-37 157.5 96 79.2
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.5e-36 156.8 112 72.3
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.5e-36 156.8 129 60.5
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.5e-36 156.8 114 67.5
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.9e-36 156.4 129 63.6
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.9e-36 156.4 97 77.3
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 2.5e-36 156.0 96 78.1
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 2.5e-36 156.0 93 78.5
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 4.3e-36 155.2 112 70.5
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.7e-36 154.8 112 70.5
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 7.4e-36 154.5 94 77.7
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 7.4e-36 154.5 92 80.4
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 9.7e-36 154.1 139 57.6
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 9.7e-36 154.1 94 76.6
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 9.7e-36 154.1 92 80.4
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.3e-35 153.7 96 76.0
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.3e-35 153.7 96 76.0
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.7e-35 153.3 160 55.0
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.7e-35 153.3 117 64.1
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.7e-35 153.3 154 57.1
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 2.2e-35 152.9 118 64.4
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.8e-35 152.5 115 68.7
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.8e-35 152.5 93 78.5
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.8e-35 152.5 93 77.4
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.8e-35 152.5 93 77.4
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.8e-35 152.5 113 67.3
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.8e-35 152.5 104 70.2
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.7e-35 152.1 159 53.5
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 3.7e-35 152.1 94 75.5
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 4.8e-35 151.8 96 74.0
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 6.3e-35 151.4 93 76.3
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 6.3e-35 151.4 93 76.3
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 6.3e-35 151.4 93 76.3
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 6.3e-35 151.4 93 74.2
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 6.3e-35 151.4 93 74.2
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 8.2e-35 151.0 135 61.5
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.1e-34 150.6 96 74.0
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.1e-34 150.6 96 74.0
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 1.4e-34 150.2 130 57.7
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 3.1e-34 149.1 161 49.1
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 3.1e-34 149.1 105 70.5
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 5.3e-34 148.3 112 67.9
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 6.9e-34 147.9 142 57.0
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 6.9e-34 147.9 136 55.9
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.2e-33 147.1 140 57.1
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 4.5e-33 145.2 108 67.6
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 5.0e-32 141.7 96 69.8
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 5.0e-32 141.7 170 46.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 5.0e-32 141.7 170 46.5
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 6.5e-32 141.4 93 73.1
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 6.5e-32 141.4 114 62.3
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 8.5e-32 141.0 100 66.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 8.5e-32 141.0 105 70.5
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 9.4e-31 137.5 100 66.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 9.4e-31 137.5 137 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.0e-29 134.0 93 68.8
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.8e-29 133.3 128 56.2
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 7.4e-28 127.9 79 78.5
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 9.7e-28 127.5 71 81.7
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 1.2e-25 120.6 72 76.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 5.9e-25 118.2 106 54.7
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.3e-24 117.1 96 63.5
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 3.8e-24 115.5 89 60.7
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 1.2e-22 110.5 76 69.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.6e-22 110.2 62 79.0
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 6.1e-22 108.2 64 75.0
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 1.0e-21 107.5 63 77.8
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 5.2e-21 105.1 134 44.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 8.2e-19 97.8 62 69.4
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.4e-18 96.3 63 66.7
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 9.7e-12 74.3 51 70.6
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 4.8e-11 72.0 51 68.6
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 8.2e-11 71.2 44 79.5


User provided reference genes

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