Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07465 Brassica carinata HOM05D007802 ORTHO05D009879 3.2e-50 201.4 101 100.0
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 2.1e-17 92.4 81 64.2
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 2.1e-17 92.4 81 64.2
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 2.7e-17 92.0 67 77.6
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 4.7e-17 91.3 81 63.0
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 7.9e-17 90.5 81 63.0
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 1.4e-16 89.7 67 74.6
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 3.0e-16 88.6 67 73.1
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 3.0e-16 88.6 81 61.7
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 3.0e-16 88.6 81 63.0
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 3.9e-16 88.2 78 62.8
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 8.8e-16 87.0 67 71.6
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 2.0e-15 85.9 78 61.5
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 2.0e-15 85.9 75 65.3
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 4.4e-15 84.7 78 60.3
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 5.7e-15 84.3 83 56.6
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 2.8e-14 82.0 67 68.7
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 3.7e-14 81.6 83 55.4
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 1.1e-13 80.1 66 68.2
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 9.4e-10 67.0 64 60.9
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 1.5e-07 59.7 65 53.8
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 2.0e-07 59.3 70 50.0
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 2.6e-07 58.9 69 50.7
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 2.6e-07 58.9 69 50.7
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 5.7e-07 57.8 91 38.5
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 1.7e-06 56.2 63 54.0
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 4.8e-06 54.7 66 47.0
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 8.2e-06 53.9 82 43.9


User provided reference genes

Program Settings