Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07404 Brassica carinata HOM05D004294 ORTHO05D004899 9.9e-92 340.1 173 100.0
C04p67330 Brassica napus HOM05D004294 ORTHO05D004899 3.1e-77 292.0 176 88.1
BolC4t28228H Brassica oleracea HOM05D004294 ORTHO05D004899 3.1e-77 292.0 176 88.1
BraA04t18462Z Brassica rapa HOM05D004294 ORTHO05D004899 5.6e-71 271.2 166 86.1
Thhalv10017327m.g Eutrema salsugineum HOM05D004294 ORTHO05D004899 9.0e-61 237.3 172 73.3
Sp4g21750 Schrenkiella parvula HOM05D004294 ORTHO05D004899 9.0e-61 237.3 172 74.4
Sp4g08170 Schrenkiella parvula HOM05D004294 ORTHO05D004899 1.7e-59 233.0 169 74.0
BcaB02g09119 Brassica carinata HOM05D004294 ORTHO05D004899 2.2e-59 232.6 170 74.7
BcaC02g12072 Brassica carinata HOM05D004294 ORTHO05D004899 3.8e-59 231.9 174 73.6
BolC4t22431H Brassica oleracea HOM05D004294 ORTHO05D004899 3.8e-59 231.9 174 73.6
C04p08280 Brassica napus HOM05D004294 ORTHO05D004899 1.9e-58 229.6 174 73.0
AL4G36820 Arabidopsis lyrata HOM05D004294 ORTHO05D004899 2.5e-58 229.2 174 70.7
Carub.0004s2151 Capsella rubella HOM05D004294 ORTHO05D004899 4.2e-58 228.4 174 70.1
A05p06950 Brassica napus HOM05D004294 ORTHO05D004899 1.2e-57 226.9 171 72.5
BraA05t19659Z Brassica rapa HOM05D004294 ORTHO05D004899 3.5e-57 225.3 170 72.4
AT2G39445 Arabidopsis thaliana HOM05D004294 ORTHO05D004899 5.1e-56 221.5 174 68.4
CARHR134310 Cardamine hirsuta HOM05D004294 ORTHO05D004899 5.1e-56 221.5 172 70.9
Carub.0004s0710 Capsella rubella HOM05D004294 ORTHO05D004899 1.6e-54 216.5 174 69.5
Aa31LG5G20160 Aethionema arabicum HOM05D004294 ORTHO05D004899 3.7e-54 215.3 173 67.1
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 2.4e-53 212.6 172 66.3
BcaB06g29086 Brassica carinata HOM05D004294 ORTHO05D004899 4.5e-52 208.4 174 69.5
A04p30460 Brassica napus HOM05D004294 ORTHO05D004899 1.3e-51 206.8 136 81.6
Sabra02G0105000 Salix brachista HOM05D004294 ORTHO05D004899 1.1e-37 160.6 171 53.2
Cpa.g.sc52.62 Carica papaya HOM05D004294 ORTHO05D004899 2.4e-37 159.5 170 54.1
Potri.002G134800 Populus trichocarpa HOM05D004294 ORTHO05D004899 1.2e-36 157.1 169 52.1
CiPaw.14G015600 Carya illinoinensis HOM05D004294 ORTHO05D004899 5.9e-36 154.8 172 52.3
Medtr2g022850 Medicago truncatula HOM05D004294 ORTHO05D004899 5.9e-36 154.8 171 52.6
vmacro19009 Vaccinium macrocarpon HOM05D004294 ORTHO05D004899 5.9e-36 154.8 170 51.8
Medtr2g084540 Medicago truncatula HOM05D004294 ORTHO05D004899 1.7e-35 153.3 171 53.2
Rhsim08G0211800 Rhododendron simsii HOM05D004294 ORTHO05D004899 2.2e-35 152.9 170 51.2
TPR.G32380 Trifolium pratense HOM05D004294 ORTHO05D004899 2.2e-35 152.9 173 53.2
Cfa022163 Carpinus fangiana HOM05D004294 ORTHO05D004899 5.0e-35 151.8 174 51.1
Haze_02916 Corylus avellana HOM05D004294 ORTHO05D004899 5.0e-35 151.8 172 51.7
BcaB02g09120 Brassica carinata HOM05D004294 ORTHO05D004899 6.5e-35 151.4 115 71.3
Glyma.13G219700 Glycine max HOM05D004294 ORTHO05D004899 6.5e-35 151.4 173 50.3
Psat2g182760 Pisum sativum HOM05D004294 ORTHO05D004899 8.5e-35 151.0 171 53.2
CSS0014990 Camellia sinensis var. sinensis HOM05D004294 ORTHO05D004899 1.4e-34 150.2 170 50.6
Eucgr.E01714 Eucalyptus grandis HOM05D004294 ORTHO05D004899 3.2e-34 149.1 170 51.2
GSVIVG01037228001 Vitis vinifera HOM05D004294 ORTHO05D004899 3.2e-34 149.1 167 50.3
CANSAT35G1700 Cannabis sativa HOM05D004294 ORTHO05D004899 4.2e-34 148.7 170 50.0
SalBow5G4501 Salvia bowleyana HOM05D004294 ORTHO05D004899 5.5e-34 148.3 171 49.1
Actinidia15750 Actinidia chinensis HOM05D004294 ORTHO05D004899 9.4e-34 147.5 173 49.7
Dinv43581 Davidia involucrata HOM05D004294 ORTHO05D004899 9.4e-34 147.5 171 50.3
Lalb_Chr14g0374351 Lupinus albus HOM05D004294 ORTHO05D004899 9.4e-34 147.5 173 49.1
MSTRG.20657 Avicennia marina HOM05D004294 ORTHO05D004899 1.6e-33 146.7 172 48.8
Hma1.2p1_1440F.1_g283530 Hydrangea macrophylla HOM05D004294 ORTHO05D004899 1.6e-33 146.7 170 50.0
Manes.02G122400 Manihot esculenta HOM05D004294 ORTHO05D004899 1.6e-33 146.7 172 50.0
Ah.09g230610 Amaranthus hybridus HOM05D004294 ORTHO05D004899 2.1e-33 146.4 170 49.4
Glyma.15G092700 Glycine max HOM05D004294 ORTHO05D004899 2.1e-33 146.4 173 49.7
Lj3g0019907 Lotus japonicus HOM05D004294 ORTHO05D004899 2.1e-33 146.4 174 51.1
Lj3g0025421 Lotus japonicus HOM05D004294 ORTHO05D004899 2.1e-33 146.4 173 49.7
Hma1.2p1_0973F.1_g243000 Hydrangea macrophylla HOM05D004294 ORTHO05D004899 2.7e-33 146.0 170 49.4
VMungo0540G0738 Vigna mungo HOM05D004294 ORTHO05D004899 3.6e-33 145.6 176 50.0
AT1G61280 Arabidopsis thaliana HOM05D004294 ORTHO05D004899 4.7e-33 145.2 132 60.6
SGA_v2.0_scaffold45G17247 Striga asiatica HOM05D004294 ORTHO05D004899 4.7e-33 145.2 175 49.1
Phvul.006G166400 Phaseolus vulgaris HOM05D004294 ORTHO05D004899 6.1e-33 144.8 174 50.0
TWI75G0011 Tripterygium wilfordii HOM05D004294 ORTHO05D004899 6.1e-33 144.8 170 48.8
unitig_0.g1581 Utricularia gibba HOM05D002708 ORTHO05D003516 6.1e-33 144.8 175 47.4
GSVIVG01026772001 Vitis vinifera HOM05D004294 ORTHO05D004899 1.4e-32 143.7 167 49.1
Ca_01696_v3 Cicer arietinum L. HOM05D004294 ORTHO05D004899 1.8e-32 143.3 169 52.1
Nitab4.5_0004088g0110 Nicotiana tabacum HOM05D004294 ORTHO05D004899 1.8e-32 143.3 169 49.1
Thecc.04G104900 Theobroma cacao HOM05D004294 ORTHO05D004899 2.3e-32 142.9 174 47.1
Cc02_g25750 Coffea canephora HOM05D004294 ORTHO05D004899 3.9e-32 142.1 170 48.8
Solyc01g150146.1 Solanum lycopersicum HOM05D004294 ORTHO05D004899 3.9e-32 142.1 169 49.1
Sopen01g035370 Solanum pennellii HOM05D004294 ORTHO05D004899 3.9e-32 142.1 169 49.1
AL2G15030 Arabidopsis lyrata HOM05D004294 ORTHO05D004899 8.8e-32 141.0 172 51.2
CAN.G756.9 Capsicum annuum HOM05D004294 ORTHO05D004899 8.8e-32 141.0 170 49.4
CiPaw.13G021200 Carya illinoinensis HOM05D004294 ORTHO05D004899 1.1e-31 140.6 168 49.4
TAR629G2021 Trochodendron aralioides HOM05D004294 ORTHO05D004899 1.1e-31 140.6 170 48.8
Atru.chr5.64 Acer truncatum HOM05D004294 ORTHO05D004899 2.6e-31 139.4 168 50.6
Peaxi162Scf00102g01053 Petunia axillaris HOM05D004294 ORTHO05D004899 2.6e-31 139.4 169 46.7
Sed0018514 Sechium edule HOM05D004294 ORTHO05D004899 2.6e-31 139.4 172 47.7
PGSC0003DMG400001711 Solanum tuberosum HOM05D004294 ORTHO05D004899 3.3e-31 139.0 169 49.1
Atru.chr5.34 Acer truncatum HOM05D004294 ORTHO05D004899 4.4e-31 138.7 168 50.0
Migut.K00778 Erythranthe guttata HOM05D004294 ORTHO05D004899 5.7e-31 138.3 171 45.6
arahy.Tifrunner.gnm1.ann1.ZAL8K4 Arachis hypogaea HOM05D004294 ORTHO05D004899 7.4e-31 137.9 173 47.4
Gohir.D08G177200 Gossypium hirsutum HOM05D004294 ORTHO05D004899 1.7e-30 136.7 175 47.4
Gohir.A08G156800 Gossypium hirsutum HOM05D004294 ORTHO05D004899 2.2e-30 136.3 175 47.4
Gorai.004G185600 Gossypium raimondii HOM05D004294 ORTHO05D004899 2.2e-30 136.3 175 47.4
QL04p025854 Quercus lobata HOM05D004294 ORTHO05D004899 2.2e-30 136.3 170 47.6
Thhalv10024054m.g Eutrema salsugineum HOM05D004294 ORTHO05D004899 3.7e-30 135.6 133 56.4
MD07G1088000 Malus domestica HOM05D004294 ORTHO05D004899 3.7e-30 135.6 169 48.5
AUR62021407 Chenopodium quinoa HOM05D004294 ORTHO05D004899 8.2e-30 134.4 166 46.4
Nitab4.5_0006873g0030 Nicotiana tabacum HOM05D004294 ORTHO05D004899 8.2e-30 134.4 170 47.6
MD02G1225800 Malus domestica HOM05D004294 ORTHO05D004899 1.4e-29 133.7 169 48.5
TAR371G1121 Trochodendron aralioides HOM05D004294 ORTHO05D004899 1.4e-29 133.7 161 48.4
AUR62021410 Chenopodium quinoa HOM05D004294 ORTHO05D004899 3.1e-29 132.5 166 47.0
AUR62010895 Chenopodium quinoa HOM05D004294 ORTHO05D004899 4.1e-29 132.1 168 47.0
PSO063G7341 Papaver somniferum HOM05D004294 ORTHO05D004899 9.1e-29 131.0 174 44.3
HanXRQChr17g0545891 Helianthus annuus HOM05D004294 ORTHO05D004899 1.2e-28 130.6 169 46.2
CARHR051330 Cardamine hirsuta HOM05D004294 ORTHO05D004899 2.0e-28 129.8 176 50.0
PSO675G3209 Papaver somniferum HOM05D004294 ORTHO05D004899 2.0e-28 129.8 171 45.0
Prupe.2G114700 Prunus persica HOM05D004294 ORTHO05D004899 2.6e-28 129.4 162 48.8
ClCG05G002810 Citrullus lanatus HOM05D004294 ORTHO05D004899 3.5e-28 129.0 169 46.2
FvH4_5g29260 Fragaria vesca HOM05D004294 ORTHO05D004899 4.5e-28 128.6 170 47.1
Lsat_1_v5_gn_4_36140 Lactuca sativa HOM05D004294 ORTHO05D004899 4.5e-28 128.6 173 46.2
DCAR_029527 Daucus carota HOM05D004294 ORTHO05D004899 5.9e-28 128.3 173 45.7
Duzib138G0823 Durio zibethinus HOM05D004294 ORTHO05D004899 5.9e-28 128.3 138 53.6
arahy.Tifrunner.gnm1.ann1.E5WW1G Arachis hypogaea HOM05D005360 ORTHO05D004899 1.0e-27 127.5 162 48.1
ECA234G1894 Erigeron canadensis HOM05D004294 ORTHO05D004899 1.0e-27 127.5 169 45.6
PSO782G1693 Papaver somniferum HOM05D004294 ORTHO05D004899 1.7e-27 126.7 174 43.1
RcHm_v2.0_Chr5g0055501 Rosa chinensis HOM05D004294 ORTHO05D004899 1.7e-27 126.7 169 45.6
Ciclev10022425m.g Citrus clementina HOM05D004294 ORTHO05D004899 2.2e-27 126.3 120 57.5
FvH4_7g08700 Fragaria vesca HOM05D004294 ORTHO05D004899 2.2e-27 126.3 170 45.9
FAN06G3965 Fragaria x ananassa HOM05D004294 ORTHO05D004899 2.2e-27 126.3 170 45.9
CsaV3_3G010340 Cucumis sativus L. HOM05D004294 ORTHO05D004899 2.9e-27 125.9 174 44.8
Carub.0002s0388 Capsella rubella HOM05D004294 ORTHO05D004899 3.8e-27 125.6 175 49.1
FAN18G1057 Fragaria x ananassa HOM05D004294 ORTHO05D004899 3.8e-27 125.6 170 46.5
FAN03G1356 Fragaria x ananassa HOM05D004294 ORTHO05D004899 1.5e-26 123.6 170 46.5
HPP92_020692 Vanilla planifolia HOM05D004294 ORTHO05D004899 1.5e-26 123.6 170 42.9
HanXRQChr10g0302581 Helianthus annuus HOM05D004294 ORTHO05D004899 1.9e-26 123.2 162 45.7
PSO541G2071 Papaver somniferum HOM05D004294 ORTHO05D004899 1.9e-26 123.2 171 43.9
RcHm_v2.0_Chr1g0343921 Rosa chinensis HOM05D004294 ORTHO05D004899 2.5e-26 122.9 170 46.5
ECA234G1071 Erigeron canadensis HOM05D004294 ORTHO05D004899 4.2e-26 122.1 169 44.4
Sed0004229 Sechium edule HOM05D004294 ORTHO05D004899 5.5e-26 121.7 176 43.2
CDE12G0039 Ceratophyllum demersum HOM05D004294 ORTHO05D004899 1.6e-25 120.2 172 44.2
Zm00001eb097750 Zea mays HOM05D004294 ORTHO05D004899 1.6e-25 120.2 164 41.5
ATR0626G354 Amborella trichopoda HOM05D004294 ORTHO05D004899 4.7e-25 118.6 173 43.9
MELO3C031598.2 Cucumis melo HOM05D004294 ORTHO05D004899 1.4e-24 117.1 172 43.6
Potri.014G043400 Populus trichocarpa HOM05D004294 ORTHO05D004899 1.5e-23 113.6 124 53.2
Gohir.D08G177066 Gossypium hirsutum HOM05D004294 ORTHO05D004899 1.3e-22 110.5 172 42.4
Hund09105 Selenicereus undatus HOM05D004294 ORTHO05D004899 1.3e-22 110.5 143 44.1
CSS0001349 Camellia sinensis var. sinensis HOM05D004294 ORTHO05D004899 2.2e-22 109.8 167 44.3
CSS0013781 Camellia sinensis var. sinensis HOM05D004294 ORTHO05D004899 1.4e-21 107.1 167 43.7
CSS0040335 Camellia sinensis var. sinensis HOM05D004294 ORTHO05D004899 1.4e-21 107.1 167 43.7
MELO3C031600.2 Cucumis melo HOM05D004294 ORTHO05D004899 3.1e-21 105.9 112 50.9
Nn6g34994 Nelumbo nucifera HOM05D004294 ORTHO05D004899 4.1e-21 105.5 108 51.9
Gorai.004G185000 Gossypium raimondii HOM05D004294 ORTHO05D004899 2.6e-20 102.8 172 41.3
MELO3C031599.2 Cucumis melo HOM05D004294 ORTHO05D004899 2.9e-19 99.4 90 55.6
Pp3c4_15230 Physcomitrium patens HOM05D004294 ORTHO05D004899 1.1e-18 97.4 142 38.7
Migut.N01709 Erythranthe guttata HOM05D004294 ORTHO05D004899 1.6e-17 93.6 164 42.7
AagrBONN_evm.TU.Sc2ySwM_362.275 Anthoceros agrestis HOM05D004294 ORTHO05D004899 3.0e-16 89.4 131 39.7
AagrBONN_evm.TU.Sc2ySwM_368.1700 Anthoceros agrestis HOM05D004294 ORTHO05D004899 5.2e-16 88.6 162 35.8
CBR_g12382 Chara braunii HOM05D004294 ORTHO05D004899 7.5e-15 84.7 137 36.5
Mapoly0030s0033 Marchantia polymorpha HOM05D004294 ORTHO05D004899 8.3e-14 81.3 146 36.3
SalBow4G1179 Salvia bowleyana HOM05D004294 ORTHO05D004899 1.1e-13 80.9 137 38.7
EL10Ac8g18381 Beta vulgaris HOM05D004294 ORTHO05D004899 3.1e-13 79.3 160 36.9
unitig_0.g1328 Utricularia gibba HOM05D004294 ORTHO05D004899 7.0e-13 78.2 175 35.4
Zm00001eb212340 Zea mays HOM05D004294 ORTHO05D004899 2.0e-12 76.6 82 46.3
Aqoxy3G02531 Aquilegia oxysepala HOM05D004294 ORTHO05D004899 2.7e-12 76.3 105 41.0
MSTRG.4966 Avicennia marina HOM05D004294 ORTHO05D004899 2.7e-12 76.3 156 35.9
Os03g0640300 Oryza sativa ssp. japonica HOM05D004294 ORTHO05D004899 1.7e-11 73.6 95 48.4
Os10g0569100 Oryza sativa ssp. japonica HOM05D004294 ORTHO05D004899 9.4e-10 67.8 92 39.1
Sp4g08150 Schrenkiella parvula HOM05D000096 ORTHO05D000045 9.4e-10 67.8 43 76.7
TPR.G23032 Trifolium pratense HOM05D004294 ORTHO05D004899 1.2e-09 67.4 46 67.4
TPR.G20146 Trifolium pratense HOM05D004294 ORTHO05D004899 1.6e-09 67.0 68 52.9
SMO232G0013 Selaginella moellendorffii HOM05D004294 ORTHO05D004899 2.7e-09 66.2 126 32.5
PGSC0003DMG400034273 Solanum tuberosum HOM05D004294 ORTHO05D004899 5.2e-08 62.0 62 58.1
PGSC0003DMG400001681 Solanum tuberosum HOM05D004294 ORTHO05D004899 8.8e-08 61.2 67 55.2
Migut.K01222 Erythranthe guttata HOM05D004294 ORTHO05D004899 2.6e-07 59.7 63 52.4
PGSC0003DMG400001683 Solanum tuberosum HOM05D004294 ORTHO05D004899 5.7e-07 58.5 166 31.9
Cfa025555 Carpinus fangiana HOM05D004294 ORTHO05D124452 1.3e-06 57.4 84 34.5
Actinidia18927 Actinidia chinensis HOM05D004294 ORTHO05D004899 8.3e-06 54.7 66 50.0
COL.COLO4_08476 Corchorus olitorius HOM05D004294 ORTHO05D004899 8.3e-06 54.7 84 40.5
SEGI_31162 Sequoiadendron giganteum HOM05D004294 ORTHO05D004899 8.3e-06 54.7 46 50.0


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