Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07195 Brassica carinata HOM05D000400 ORTHO05D000575 1.2e-30 136.0 75 100.0
BcaB06g29297 Brassica carinata HOM05D000400 ORTHO05D000575 6.5e-24 113.6 63 96.8
A04p32590 Brassica napus HOM05D000400 ORTHO05D000575 5.5e-23 110.5 62 95.2
BraA04t18723Z Brassica rapa HOM05D000400 ORTHO05D000575 5.5e-23 110.5 62 95.2
AL4G36290 Arabidopsis lyrata HOM05D000400 ORTHO05D000575 3.7e-11 71.2 77 50.6
BcaB02g09148 Brassica carinata HOM05D000400 ORTHO05D000575 6.3e-11 70.5 72 58.3
BraA05t19686Z Brassica rapa HOM05D000400 ORTHO05D000575 5.3e-10 67.4 65 56.9
Carub.0004s2102 Capsella rubella HOM05D000400 ORTHO05D000575 1.2e-09 66.2 74 48.6
AT2G38995 Arabidopsis thaliana HOM05D000400 ORTHO05D000575 1.6e-09 65.9 65 55.4
A05p07220 Brassica napus HOM05D000400 ORTHO05D000575 2.0e-09 65.5 65 55.4
BolC3t14968H Brassica oleracea HOM05D000400 ORTHO05D000575 2.0e-09 65.5 62 58.1
BcaC01g05495 Brassica carinata HOM05D000400 ORTHO05D000575 2.7e-09 65.1 75 49.3
BcaB01g03639 Brassica carinata HOM05D000400 ORTHO05D000575 3.5e-09 64.7 78 47.4
A03p21780 Brassica napus HOM05D000400 ORTHO05D000575 5.9e-09 63.9 75 49.3
C03p25820 Brassica napus HOM05D000400 ORTHO05D000575 5.9e-09 63.9 75 49.3
BraA03t11412Z Brassica rapa HOM05D000400 ORTHO05D000575 5.9e-09 63.9 75 49.3
Sp4g21350 Schrenkiella parvula HOM05D000400 ORTHO05D000575 7.7e-09 63.5 77 49.4
A03p21790 Brassica napus HOM05D000400 ORTHO05D000575 1.0e-08 63.2 66 59.1
C03p25840 Brassica napus HOM05D000400 ORTHO05D000575 1.0e-08 63.2 66 59.1
BraA03t11413Z Brassica rapa HOM05D000400 ORTHO05D000575 1.0e-08 63.2 66 59.1
Carub.0004s2103 Capsella rubella HOM05D000400 ORTHO05D000575 1.7e-08 62.4 78 47.4
BcaB01g03640 Brassica carinata HOM05D000400 ORTHO05D000575 2.2e-08 62.0 69 52.2
CARHR133740 Cardamine hirsuta HOM05D000400 ORTHO05D000575 2.2e-08 62.0 66 56.1
Carub.0004s2101 Capsella rubella HOM05D000400 ORTHO05D000575 5.0e-08 60.8 79 46.8
BolC3t14970H Brassica oleracea HOM05D000400 ORTHO05D000575 8.5e-08 60.1 66 56.1
SpUn0005_0310 Schrenkiella parvula HOM05D000400 ORTHO05D000575 2.5e-07 58.5 80 47.5
SpUn0040_0020 Schrenkiella parvula HOM05D000400 ORTHO05D000575 2.5e-07 58.5 80 47.5
BcaB02g08032 Brassica carinata HOM05D000400 ORTHO05D000575 3.2e-07 58.2 67 50.7
BcaC01g05494 Brassica carinata HOM05D000400 ORTHO05D000575 4.2e-07 57.8 66 56.1
A05p16190 Brassica napus HOM05D000400 ORTHO05D000575 1.2e-06 56.2 77 46.8
BraA05t20531Z Brassica rapa HOM05D000400 ORTHO05D000575 1.2e-06 56.2 77 46.8
BcaC08g44343 Brassica carinata HOM05D000400 ORTHO05D000575 1.6e-06 55.8 77 46.8
C06p17810 Brassica napus HOM05D000400 ORTHO05D000575 1.6e-06 55.8 77 46.8
CARHR215790 Cardamine hirsuta HOM05D000400 ORTHO05D000575 2.1e-06 55.5 65 52.3
THA.LOC104811920 Tarenaya hassleriana HOM05D000400 ORTHO05D000575 2.7e-06 55.1 53 56.6
AL7G45900 Arabidopsis lyrata HOM05D000400 ORTHO05D000575 3.6e-06 54.7 67 52.2
BolC6t36974H Brassica oleracea HOM05D000400 ORTHO05D000575 3.6e-06 54.7 77 46.8
Thhalv10016602m.g Eutrema salsugineum HOM05D000400 ORTHO05D000575 3.6e-06 54.7 52 57.7
C04p70240 Brassica napus HOM05D001997 ORTHO05D004620 6.1e-06 53.9 31 93.5
BolC4t28528H Brassica oleracea HOM05D001997 ORTHO05D004620 6.1e-06 53.9 31 93.5
THA.LOC104825144 Tarenaya hassleriana HOM05D000400 ORTHO05D000575 6.1e-06 53.9 53 45.3


User provided reference genes

Program Settings