Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 2.0e-172 609.0 308 100.0
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.3e-158 563.1 313 93.3
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.3e-158 563.1 313 93.3
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 5.7e-151 537.7 311 88.1
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 2.9e-147 525.4 310 87.4
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 4.7e-145 518.1 312 86.9
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 2.0e-132 476.1 336 74.7
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 1.2e-124 450.3 332 71.1
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 2.1e-124 449.5 326 71.8
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.5e-122 442.6 345 67.0
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 7.3e-122 441.0 330 70.6
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 1.5e-119 433.3 316 71.8
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.0e-111 406.4 290 73.4
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.1e-109 400.6 327 64.2
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 6.4e-102 374.8 320 59.4
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.1e-101 374.0 320 59.7
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.4e-101 372.9 320 59.4
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 9.3e-101 370.9 327 57.2
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 5.1e-99 365.2 330 55.5
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 8.7e-99 364.4 323 58.5
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 1.9e-98 363.2 330 57.9
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.6e-97 360.1 330 57.0
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 1.1e-96 357.5 320 56.2
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 4.0e-96 355.5 331 57.7
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 9.0e-96 354.4 320 56.2
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 4.5e-95 352.1 313 55.9
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.3e-94 350.5 333 55.0
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 1.3e-94 350.5 325 55.1
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.7e-94 350.1 343 53.1
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 2.2e-94 349.7 311 56.6
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.4e-94 348.2 327 55.0
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.4e-94 348.2 327 55.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.4e-93 347.1 325 53.5
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.4e-93 347.1 326 55.2
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 4.2e-93 345.5 330 54.5
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 7.1e-93 344.7 324 53.1
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 7.1e-93 344.7 329 55.0
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 9.3e-93 344.4 328 54.6
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.2e-92 344.0 318 56.6
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.6e-92 343.6 330 53.6
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 2.7e-92 342.8 317 54.6
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 3.5e-92 342.4 329 54.7
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 3.5e-92 342.4 331 55.0
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.3e-91 340.5 331 54.1
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 1.3e-91 340.5 322 55.6
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.3e-91 340.5 329 55.0
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.8e-91 340.1 321 54.2
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 1.8e-91 340.1 323 55.4
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 2.3e-91 339.7 329 54.4
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 3.9e-91 339.0 331 52.3
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 8.7e-91 337.8 316 54.4
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 8.7e-91 337.8 324 54.9
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 1.5e-90 337.0 319 56.1
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.5e-90 337.0 329 54.1
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.9e-90 336.7 329 54.7
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.5e-90 336.3 329 53.2
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 2.5e-90 336.3 323 53.9
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.6e-90 335.1 323 53.9
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 7.4e-90 334.7 328 52.7
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.6e-89 333.6 319 53.0
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.6e-89 333.6 315 57.1
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.7e-89 332.4 327 53.2
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 8.2e-89 331.3 318 54.1
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.8e-88 330.1 330 53.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.8e-88 330.1 330 53.0
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 9.0e-88 327.8 329 53.2
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 2.6e-87 326.2 328 51.8
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 2.6e-87 326.2 328 51.8
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 4.5e-87 325.5 328 53.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 7.6e-87 324.7 328 52.1
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 7.6e-87 324.7 321 54.8
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 3.8e-86 322.4 317 51.1
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 8.4e-86 321.2 275 57.1
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 1.1e-85 320.9 330 52.4
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 4.2e-85 318.9 328 52.1
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 5.5e-85 318.5 313 53.0
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-84 317.4 331 51.1
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 3.0e-83 312.8 297 54.2
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 5.1e-83 312.0 319 50.2
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 5.1e-83 312.0 319 48.3
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 3.7e-81 305.8 321 48.3
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.1e-80 304.3 301 52.5
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.1e-80 304.3 332 47.3
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.4e-80 303.9 315 50.2
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 1.3e-78 297.4 279 53.8
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 7.9e-76 288.1 332 47.3
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 5.7e-74 282.0 326 48.2
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 7.4e-74 281.6 335 47.8
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 2.8e-73 279.6 375 42.9
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 6.3e-73 278.5 329 45.0
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 6.3e-73 278.5 310 51.0
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.6e-71 273.1 268 53.4
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 2.6e-71 273.1 322 47.8
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 6.7e-67 258.5 260 49.2
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 1.3e-65 254.2 313 44.7
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.2e-63 247.7 327 41.3
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 1.7e-62 243.8 351 40.7
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 8.0e-60 235.0 253 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 2.0e-58 230.3 330 40.3
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 2.0e-58 230.3 339 40.1
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 8.5e-54 214.9 315 38.4
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 3.0e-51 206.5 181 60.8
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.8e-48 197.2 388 34.0
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.7e-47 193.4 387 33.1
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 3.2e-45 186.4 209 49.3
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 3.1e-40 169.9 134 64.2
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 5.2e-35 152.5 133 58.6
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.7e-33 146.4 329 29.8
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 6.3e-33 145.6 122 61.5
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.1e-32 144.8 150 48.7
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 3.9e-30 136.3 116 62.1
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.1e-29 134.8 117 52.1
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.0e-27 128.3 198 36.9
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 5.2e-27 125.9 136 50.0
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 6.0e-23 112.5 106 50.0
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 6.6e-22 109.0 94 52.1
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 1.1e-21 108.2 87 60.9
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 5.4e-16 89.4 70 65.7
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 7.0e-16 89.0 316 25.6
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 1.2e-15 88.2 145 40.0
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.5e-13 81.3 61 65.6
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 2.8e-12 77.0 108 42.6
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 4.7e-12 76.3 144 36.8
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 4.4e-10 69.7 57 57.9


User provided reference genes

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