Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07015 Brassica carinata HOM05D010353 ORTHO05D011141 3.3e-71 271.6 131 100.0
BcaC02g07038 Brassica carinata HOM05D010353 ORTHO05D011141 5.8e-60 234.2 141 85.8
C04p72210 Brassica napus HOM05D010353 ORTHO05D011141 2.0e-52 209.1 135 78.5
BraA04t18902Z Brassica rapa HOM05D010353 ORTHO05D011141 1.7e-51 206.1 135 77.0
BolC4t28708H Brassica oleracea HOM05D010353 ORTHO05D011141 2.2e-51 205.7 135 77.0
Sp4g28580 Schrenkiella parvula HOM05D010353 ORTHO05D011141 1.3e-48 196.4 132 76.5
BcaC02g12670 Brassica carinata HOM05D010353 ORTHO05D011141 6.6e-48 194.1 139 73.4
AL4G45960 Arabidopsis lyrata HOM05D010353 ORTHO05D011141 4.7e-46 188.0 133 72.9
BcaC02g12680 Brassica carinata HOM05D010353 ORTHO05D011141 4.0e-45 184.9 135 73.3
C04p01390 Brassica napus HOM05D010353 ORTHO05D011141 4.0e-45 184.9 135 73.3
BolC4t21792H Brassica oleracea HOM05D010353 ORTHO05D011141 6.8e-45 184.1 135 72.6
Thhalv10001658m.g Eutrema salsugineum HOM05D010353 ORTHO05D011141 1.5e-44 183.0 129 72.1
A04p34440 Brassica napus HOM05D010353 ORTHO05D011141 3.4e-44 181.8 104 83.7
A05p01240 Brassica napus HOM05D010353 ORTHO05D011141 4.4e-44 181.4 135 71.9
BraA05t19125Z Brassica rapa HOM05D010353 ORTHO05D011141 4.4e-44 181.4 135 71.9
AT2G46535 Arabidopsis thaliana HOM05D010353 ORTHO05D011141 9.9e-44 180.3 134 70.1
Carub.0004s2925 Capsella rubella HOM05D010353 ORTHO05D011141 3.8e-43 178.3 133 72.9
CARHR141870 Cardamine hirsuta HOM05D010353 ORTHO05D011141 6.4e-43 177.6 132 68.9
BcaB01g03204 Brassica carinata HOM05D010353 ORTHO05D011141 1.0e-40 170.2 132 69.7
Aa31LG1G27920 Aethionema arabicum HOM05D010353 ORTHO05D011141 7.3e-39 164.1 128 68.8
AL5G41110 Arabidopsis lyrata HOM05D010353 ORTHO05D011141 2.3e-24 115.9 60 86.7
THA.LOC104817373 Tarenaya hassleriana HOM05D010353 ORTHO05D011141 9.3e-18 94.0 145 44.1
Carub.0005s2858 Capsella rubella HOM05D011689 ORTHO05D011141 6.9e-13 77.8 84 50.0
AT3G61840 Arabidopsis thaliana HOM05D011689 ORTHO05D011141 1.0e-11 73.9 84 47.6
CARHR172170 Cardamine hirsuta HOM05D011689 ORTHO05D011141 1.0e-11 73.9 128 37.5
AL5G44420 Arabidopsis lyrata HOM05D011689 ORTHO05D011141 2.2e-11 72.8 84 47.6
C08p36670 Brassica napus HOM05D011689 ORTHO05D011141 1.0e-08 63.9 133 36.1
BolC8t51249H Brassica oleracea HOM05D011689 ORTHO05D011141 1.0e-08 63.9 133 36.1
Glyma.19G257000 Glycine max HOM05D002242 ORTHO05D002275 1.8e-08 63.2 149 34.2
A09p53870 Brassica napus HOM05D011689 ORTHO05D011141 2.3e-08 62.8 133 36.1
BcaC07g42597 Brassica carinata HOM05D011689 ORTHO05D011141 5.1e-08 61.6 100 42.0
Glyma.03G258400 Glycine max HOM05D002242 ORTHO05D002275 6.7e-08 61.2 150 35.3
BraA09t40802Z Brassica rapa HOM05D011689 ORTHO05D011141 1.1e-07 60.5 101 44.6
TWI14G0218 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 1.5e-07 60.1 193 28.0
VMungo0540G1854 Vigna mungo HOM05D002242 ORTHO05D002275 2.5e-07 59.3 159 32.1
Thhalv10006487m.g Eutrema salsugineum HOM05D011689 ORTHO05D011141 5.7e-07 58.2 82 46.3
BcaB02g07348 Brassica carinata HOM05D011689 ORTHO05D011141 7.4e-07 57.8 48 64.6
Atru.chr5.685 Acer truncatum HOM05D002242 ORTHO05D002275 1.6e-06 56.6 211 29.4
PGSC0003DMG400007035 Solanum tuberosum HOM05D002242 ORTHO05D002275 3.7e-06 55.5 154 29.2
Solyc05g050550.4 Solanum lycopersicum HOM05D002242 ORTHO05D002275 4.8e-06 55.1 157 29.3
BolC6t37962H Brassica oleracea HOM05D011689 ORTHO05D011141 8.2e-06 54.3 49 59.2
CsaV3_6G008510 Cucumis sativus L. HOM05D002242 ORTHO05D002275 8.2e-06 54.3 145 30.3
Medtr7g117695 Medicago truncatula HOM05D002242 ORTHO05D002275 8.2e-06 54.3 177 31.6


User provided reference genes

Program Settings