Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 4.5e-239 830.9 420 100.0
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 1.7e-238 828.9 420 99.8
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 1.7e-238 828.9 420 99.8
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 4.2e-237 824.3 420 98.8
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 6.0e-236 820.5 420 98.1
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 1.9e-234 815.5 420 97.6
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 1.3e-233 812.8 420 97.4
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 4.8e-233 810.8 415 97.8
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 3.4e-231 804.7 420 95.5
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 7.6e-231 803.5 420 95.5
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 7.6e-231 803.5 420 96.4
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 1.0e-230 803.1 420 95.2
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 5.0e-230 800.8 420 96.2
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 6.5e-230 800.4 420 96.0
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 6.5e-230 800.4 420 95.7
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 9.3e-229 796.6 420 94.8
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 9.3e-229 796.6 420 94.8
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 1.3e-225 786.2 413 95.9
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 3.0e-219 765.0 420 90.5
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 8.8e-219 763.5 418 90.7
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 2.9e-214 748.4 420 88.8
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.1e-213 746.5 420 88.3
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 3.2e-213 745.0 420 88.6
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 1.6e-212 742.7 420 87.6
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.6e-212 742.7 420 88.1
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 2.7e-212 741.9 420 88.1
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 3.0e-211 738.4 420 87.6
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 3.0e-211 738.4 417 87.8
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 6.7e-211 737.3 420 86.9
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 1.1e-210 736.5 420 87.4
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 3.3e-210 734.9 420 86.2
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 4.4e-210 734.6 420 87.1
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 6.3e-209 730.7 420 86.7
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 6.3e-209 730.7 420 85.7
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 8.2e-209 730.3 420 86.2
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 1.1e-208 729.9 420 86.0
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 1.1e-208 729.9 420 86.4
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.8e-208 729.2 420 86.4
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 2.4e-208 728.8 419 85.7
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 4.1e-208 728.0 420 85.7
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 5.3e-208 727.6 420 85.2
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 7.0e-208 727.2 417 86.6
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 3.5e-207 724.9 420 85.0
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 7.7e-207 723.8 420 85.7
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 1.0e-206 723.4 420 85.2
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 1.3e-206 723.0 420 85.2
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 1.3e-206 723.0 420 85.5
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 1.7e-206 722.6 420 84.5
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 6.5e-206 720.7 420 84.0
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 8.5e-206 720.3 417 85.1
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 1.1e-205 719.9 420 85.2
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 1.1e-205 719.9 415 85.8
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 3.2e-205 718.4 420 85.2
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 3.2e-205 718.4 420 85.0
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.2e-205 718.0 420 84.5
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 4.2e-205 718.0 420 83.6
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.5e-205 717.6 420 84.5
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 5.5e-205 717.6 420 84.0
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 5.5e-205 717.6 420 84.5
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 7.2e-205 717.2 420 84.5
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 1.6e-204 716.1 420 84.3
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 1.6e-204 716.1 417 84.7
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 1.6e-204 716.1 420 84.0
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 1.6e-204 716.1 420 84.3
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.6e-204 716.1 420 84.5
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 2.7e-204 715.3 420 83.8
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 3.6e-204 714.9 420 85.0
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 3.6e-204 714.9 420 84.3
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 1.4e-203 713.0 420 83.8
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 4.0e-203 711.4 421 83.6
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 1.5e-202 709.5 416 84.1
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.6e-202 708.8 414 85.0
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.3e-202 708.4 420 83.1
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 4.4e-202 708.0 444 81.1
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.7e-202 706.8 434 81.8
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 1.7e-201 706.1 416 83.7
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 6.3e-201 704.1 420 82.6
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 8.2e-201 703.7 420 85.0
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 1.6e-199 699.5 417 82.0
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 4.5e-199 698.0 420 81.9
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.7e-198 696.0 421 81.5
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 3.8e-198 694.9 466 77.3
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 8.5e-198 693.7 420 82.6
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 8.5e-198 693.7 421 81.5
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 1.1e-197 693.3 416 82.5
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 3.2e-197 691.8 420 80.5
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 5.5e-197 691.0 419 80.9
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 7.2e-197 690.6 433 79.9
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 2.1e-196 689.1 419 80.7
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 2.3e-195 685.6 420 80.5
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 8.3e-193 677.2 420 79.0
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.5e-191 671.4 420 78.1
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 4.5e-191 671.4 420 78.3
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 2.9e-190 668.7 420 78.3
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 1.9e-189 666.0 417 78.9
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 7.2e-189 664.1 417 78.7
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 3.0e-187 658.7 420 79.8
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 2.0e-186 656.0 420 78.8
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.8e-186 653.7 419 76.8
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 1.8e-184 649.4 420 79.0
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 5.4e-184 647.9 417 75.5
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 1.3e-182 643.3 420 75.0
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 6.6e-182 641.0 416 77.2
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 1.5e-181 639.8 420 77.4
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 1.9e-181 639.4 413 78.7
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 4.3e-181 638.3 420 74.5
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 4.3e-181 638.3 420 74.0
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 7.3e-181 637.5 420 76.9
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.6e-180 636.3 420 76.7
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 6.8e-179 630.9 428 75.9
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 5.7e-178 627.9 611 57.3
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 1.3e-177 626.7 420 72.9
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.9e-177 625.5 415 77.1
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 5.4e-176 621.3 417 76.0
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 5.4e-176 621.3 417 75.5
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.0e-174 615.5 412 74.3
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.6e-174 614.4 406 74.9
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 1.5e-173 613.2 417 73.1
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.5e-173 613.2 437 72.8
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 5.6e-173 611.3 401 77.8
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 5.6e-173 611.3 470 70.0
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 2.8e-172 609.0 359 83.6
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 1.7e-169 599.7 410 72.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.7e-169 598.6 407 73.2
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 1.1e-168 597.0 420 69.8
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 9.2e-168 594.0 353 82.2
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 1.0e-166 590.5 410 71.5
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 1.9e-165 586.3 352 83.0
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.3e-165 585.1 409 72.9
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 7.3e-165 584.3 339 84.4
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 4.7e-164 581.6 430 69.1
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 2.3e-163 579.3 356 81.2
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 6.8e-163 577.8 335 85.7
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.3e-158 563.5 403 69.7
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 3.0e-158 562.4 298 94.6
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 1.2e-156 557.0 411 65.2
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 3.6e-156 555.4 426 66.9
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 2.4e-155 552.7 415 70.4
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.6e-151 540.0 399 68.9
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 7.8e-151 537.7 314 85.4
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.9e-137 492.7 408 64.5
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 3.5e-135 485.7 418 58.6
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 5.6e-133 478.4 281 83.3
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.9e-128 463.4 286 78.3
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 6.9e-123 444.9 437 55.4
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 1.5e-122 443.7 425 55.1
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 1.3e-113 414.1 429 51.5
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 1.4e-112 410.6 237 86.5
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 1.5e-106 390.6 256 75.0
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 1.0e-102 377.9 435 48.5
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.9e-89 333.2 465 43.2
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.8e-86 323.9 199 81.4
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 2.7e-82 310.1 412 42.0
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 1.0e-81 308.1 171 88.3
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 4.2e-72 276.2 239 60.3
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 1.8e-67 260.8 168 76.2
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 5.4e-67 259.2 150 82.0
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 1.5e-61 241.1 166 71.1
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 1.1e-56 224.9 158 73.4
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 4.7e-55 219.5 161 69.6
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.1e-54 218.4 248 52.0
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 9.2e-35 152.1 96 78.1
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 2.4e-30 137.5 86 77.9
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 3.4e-29 133.7 86 76.7
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 4.4e-29 133.3 126 60.3
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 6.0e-26 122.9 228 36.4
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.2e-21 108.6 72 75.0
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 9.9e-21 105.5 129 48.1
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 2.1e-18 97.8 95 57.9
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 1.0e-17 95.5 55 78.2
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 1.0e-17 95.5 162 39.5
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 3.3e-16 90.5 58 75.9
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 5.3e-14 83.2 55 65.5
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 1.3e-12 78.6 230 28.7
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 8.4e-12 75.9 48 79.2
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 2.7e-10 70.9 38 92.1
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 1.8e-09 68.2 113 38.1
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 3.9e-09 67.0 47 72.3
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 5.1e-09 66.6 70 50.0
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 7.4e-08 62.8 32 84.4
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 1.3e-07 62.0 38 71.1
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 1.3e-07 62.0 44 65.9
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 3.1e-06 57.4 30 83.3


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