Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06836 Brassica carinata HOM05D008499 ORTHO05D011708 1.0e-279 966.1 490 100.0
BcaC04g23561 Brassica carinata HOM05D008499 ORTHO05D011708 6.7e-178 627.9 505 69.7
BcaC09g51793 Brassica carinata HOM05D008499 ORTHO05D011708 7.2e-172 607.8 516 68.0
BcaC06g35876 Brassica carinata HOM05D008499 ORTHO05D011708 4.5e-150 535.4 504 61.5
BcaC04g21107 Brassica carinata HOM05D008499 ORTHO05D011708 1.8e-146 523.5 512 59.0
BcaC02g10595 Brassica carinata HOM05D008499 ORTHO05D011708 7.5e-137 491.5 500 59.0
BcaC03g14565 Brassica carinata HOM05D008499 ORTHO05D011708 1.9e-132 476.9 490 58.0
BcaC03g16487 Brassica carinata HOM05D008499 ORTHO05D011708 5.3e-90 335.9 342 56.7
BcaC05g27822 Brassica carinata HOM05D008499 ORTHO05D011708 1.2e-78 298.1 222 70.7
BcaC02g09768 Brassica carinata HOM05D008499 ORTHO05D011708 2.6e-73 280.4 277 58.5
BolC9t57205H Brassica oleracea HOM05D008499 ORTHO05D011708 7.6e-73 278.9 219 68.9
BolC3t20160H Brassica oleracea HOM05D008499 ORTHO05D011708 6.5e-72 275.8 202 73.8
BcaC03g17851 Brassica carinata HOM05D008499 ORTHO05D011708 6.3e-59 232.6 194 64.9
BcaC08g42829 Brassica carinata HOM05D008499 ORTHO05D011708 2.6e-57 227.3 311 46.3
BcaC03g16522 Brassica carinata HOM05D008499 ORTHO05D011708 6.5e-48 196.1 184 59.2
BcaC06g35987 Brassica carinata HOM05D008499 ORTHO05D011708 2.7e-46 190.7 194 55.7
BcaC04g20826 Brassica carinata HOM05D008499 ORTHO05D011708 1.6e-38 164.9 182 55.5
BcaC04g20456 Brassica carinata HOM05D008499 ORTHO05D011708 4.7e-38 163.3 195 50.8
BcaC06g35019 Brassica carinata HOM05D008499 ORTHO05D011708 1.6e-33 148.3 182 51.6
BolC9t55614H Brassica oleracea HOM05D008499 ORTHO05D027060 8.5e-32 142.5 107 69.2
BcaC04g20622 Brassica carinata HOM05D008499 ORTHO05D011708 1.0e-29 135.6 203 45.8
BcaC05g28467 Brassica carinata HOM05D008499 ORTHO05D011708 2.3e-29 134.4 132 59.1
BcaC03g17850 Brassica carinata HOM05D008499 ORTHO05D091080 4.0e-29 133.7 88 73.9
BcaC08g42949 Brassica carinata HOM05D008499 ORTHO05D011708 8.8e-29 132.5 182 47.3
BcaC06g35986 Brassica carinata HOM05D008499 ORTHO05D011622 2.6e-28 131.0 118 59.3
BcaC07g41033 Brassica carinata HOM05D008499 ORTHO05D027060 2.8e-27 127.5 100 67.0
BcaC03g15820 Brassica carinata HOM05D008499 ORTHO05D027060 5.4e-26 123.2 83 74.7
BcaC01g02129 Brassica carinata HOM05D008499 ORTHO05D000352 1.3e-24 118.6 80 73.8
BcaC02g10682 Brassica carinata HOM05D008499 ORTHO05D011708 1.3e-24 118.6 102 64.7
BcaC08g42950 Brassica carinata HOM05D008499 ORTHO05D091405 5.2e-21 106.7 113 56.6
BcaC06g36094 Brassica carinata HOM05D008499 ORTHO05D095240 1.4e-18 98.6 188 38.3
BcaC08g42983 Brassica carinata HOM05D008499 ORTHO05D093417 2.4e-18 97.8 78 64.1
BcaC08g42793 Brassica carinata HOM05D008499 ORTHO05D011708 3.2e-18 97.4 126 49.2
BcaC07g41034 Brassica carinata HOM05D008499 ORTHO05D011708 9.2e-18 95.9 102 53.9
BcaC07g37266 Brassica carinata HOM05D008499 ORTHO05D027060 2.7e-17 94.4 81 61.7
BcaC01g02119 Brassica carinata HOM05D008499 ORTHO05D011622 2.1e-14 84.7 120 49.2
BcaC08g44205 Brassica carinata HOM05D008499 ORTHO05D095820 1.8e-13 81.6 134 43.3
BcaC06g35018 Brassica carinata HOM05D008499 ORTHO05D000352 4.9e-11 73.6 43 76.7
BcaC04g21664 Brassica carinata HOM05D000429 ORTHO05D000352 6.4e-11 73.2 53 66.0
BcaC07g37527 Brassica carinata HOM05D008499 ORTHO05D011708 4.6e-09 67.0 105 42.9
BcaC07g38208 Brassica carinata HOM05D000429 ORTHO05D000352 6.0e-09 66.6 43 72.1
BcaB04g18790 Brassica carinata HOM05D001803 ORTHO05D001686 1.5e-07 62.0 103 31.1
BcaC06g36067 Brassica carinata HOM05D022718 ORTHO05D024089 1.9e-07 61.6 49 59.2
BolC8t47708H Brassica oleracea HOM05D008467 ORTHO05D013801 2.1e-06 58.2 130 27.7
BraA05t21057Z Brassica rapa HOM05D008467 ORTHO05D013801 2.1e-06 58.2 180 25.6
BraA02t07611Z Brassica rapa HOM05D008499 ORTHO05D011708 2.8e-06 57.8 50 64.0
Sp3g24840 Schrenkiella parvula HOM05D012053 ORTHO05D015537 2.8e-06 57.8 217 23.5
SpUn1406_0010 Schrenkiella parvula HOM05D012053 ORTHO05D015537 8.1e-06 56.2 152 26.3


User provided reference genes

Program Settings