Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 0.0e+00 1323.5 682 100.0
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-272 942.2 645 78.8
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-227 793.5 652 68.9
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-222 776.2 640 67.8
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-143 514.2 464 64.0
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-140 503.1 335 79.1
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-131 474.6 545 53.2
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 2.7e-108 397.1 471 53.7
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 4.0e-104 383.3 246 80.5
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-99 365.9 268 71.6
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-98 362.8 262 71.8
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-95 353.6 246 72.0
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 9.9e-87 325.5 246 67.5
BcaC08g43032 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-84 318.5 229 78.2
BcaC03g15125 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-78 298.5 229 72.9
BcaC04g20824 Brassica carinata HOM05D006121 ORTHO05D013509 4.2e-77 293.5 214 77.1
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 3.5e-76 290.4 214 77.1
BolC7t41205H Brassica oleracea HOM05D006121 ORTHO05D013509 6.0e-76 289.7 469 47.1
BcaC04g23560 Brassica carinata HOM05D006121 ORTHO05D013509 3.0e-75 287.3 214 77.1
BcaC02g10895 Brassica carinata HOM05D006121 ORTHO05D013509 4.3e-74 283.5 212 76.9
BcaC06g35840 Brassica carinata HOM05D006121 ORTHO05D013509 3.8e-70 270.4 213 70.9
BcaC04g22047 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-65 255.0 154 86.4
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 6.5e-62 243.0 162 75.9
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 6.5e-62 243.0 211 58.3
BcaC03g18509 Brassica carinata HOM05D006121 ORTHO05D013509 2.5e-61 241.1 212 65.1
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-61 240.0 202 58.9
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-59 233.8 161 72.7
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 9.7e-58 229.2 209 54.5
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 8.2e-57 226.1 161 70.2
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-56 224.2 496 33.5
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-55 220.7 218 51.4
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-53 214.5 521 32.4
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-52 211.1 529 32.5
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 5.7e-50 203.4 521 30.1
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-48 198.7 132 81.1
BcaC03g16667 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-47 193.7 208 57.7
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-46 190.7 534 30.5
BolC8t48817H Brassica oleracea HOM05D006121 ORTHO05D009559 5.0e-46 190.3 269 47.2
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-45 189.1 132 75.0
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-44 183.7 453 32.7
BraA05t21496Z Brassica rapa HOM05D000633 ORTHO05D000477 6.1e-44 183.3 332 41.3
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 2.0e-42 178.3 448 31.2
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 5.7e-42 176.8 529 29.1
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-39 169.1 187 43.3
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-39 168.7 524 28.2
BcaC03g15124 Brassica carinata HOM05D008386 ORTHO05D010572 6.5e-38 163.3 128 69.5
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-35 153.3 489 28.8
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 8.8e-35 152.9 89 75.3
BcaC07g38132 Brassica carinata HOM05D008386 ORTHO05D010572 1.5e-34 152.1 128 64.1
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-34 150.6 537 28.3
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-33 147.5 110 72.7
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-32 143.7 82 78.0
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 9.1e-32 142.9 524 28.2
BcaC01g01840 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-31 142.1 128 61.7
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 3.5e-31 141.0 326 32.2
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 5.9e-31 140.2 110 65.5
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 3.8e-30 137.5 476 25.8
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 8.5e-30 136.3 113 61.1
BcaC05g26479 Brassica carinata HOM05D008386 ORTHO05D010572 3.2e-29 134.4 128 54.7
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-29 134.4 113 61.1
BcaC04g20381 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-29 133.7 86 83.7
BcaC01g01789 Brassica carinata HOM05D006121 ORTHO05D013509 7.2e-29 133.3 114 66.7
BcaC01g01790 Brassica carinata HOM05D006121 ORTHO05D009559 7.2e-29 133.3 82 89.0
BcaC07g37146 Brassica carinata HOM05D006121 ORTHO05D013509 7.2e-29 133.3 114 69.3
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-27 129.0 460 28.5
BolC9t57206H Brassica oleracea HOM05D008386 ORTHO05D010572 3.4e-26 124.4 157 49.0
BcaC09g49406 Brassica carinata HOM05D006121 ORTHO05D013509 7.5e-26 123.2 210 45.2
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 2.2e-25 121.7 102 52.9
BcaC04g20624 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-25 120.6 84 76.2
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-25 120.2 92 70.7
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 8.3e-25 119.8 59 93.2
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 1.8e-24 118.6 121 43.0
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 2.4e-24 118.2 157 38.9
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 5.4e-24 117.1 59 91.5
BcaC01g00175 Brassica carinata HOM05D006121 ORTHO05D013509 2.7e-23 114.8 77 77.9
BcaC01g00391 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-23 114.0 87 66.7
BcaC07g37083 Brassica carinata HOM05D006121 ORTHO05D009559 7.7e-23 113.2 88 67.0
BcaC07g37447 Brassica carinata HOM05D006121 ORTHO05D009559 7.7e-23 113.2 207 44.4
BcaC03g16666 Brassica carinata HOM05D006121 ORTHO05D013509 1.7e-22 112.1 68 85.3
BcaC03g16202 Brassica carinata HOM05D006121 ORTHO05D013509 1.1e-21 109.4 65 89.2
BcaC08g43698 Brassica carinata HOM05D006121 ORTHO05D013509 1.5e-21 109.0 65 87.7
BcaC08g43421 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-21 108.6 75 77.3
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-21 107.5 94 60.6
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 4.2e-21 107.5 59 81.4
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-20 105.5 81 70.4
BcaC01g01841 Brassica carinata HOM05D006121 ORTHO05D013509 2.7e-20 104.8 68 82.4
BcaC08g42836 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-20 104.8 91 64.8
BcaC05g27676 Brassica carinata HOM05D006121 ORTHO05D009559 3.6e-20 104.4 73 76.7
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 8.0e-20 103.2 59 83.1
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 1.0e-19 102.8 59 83.1
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 2.3e-19 101.7 59 81.4
BcaB04g18086 Brassica carinata HOM05D008386 ORTHO05D010572 3.0e-19 101.3 72 65.3
BcaC04g20778 Brassica carinata HOM05D008386 ORTHO05D010572 4.0e-19 100.9 59 79.7
BcaB08g35499 Brassica carinata HOM05D008386 ORTHO05D010572 6.8e-19 100.1 93 55.9
BcaC07g39839 Brassica carinata HOM05D006121 ORTHO05D013509 1.2e-18 99.4 68 73.5
BcaC07g38330 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-18 98.2 69 78.3
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-18 97.8 159 32.7
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.7e-18 97.1 160 32.5
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-17 95.9 159 32.1
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-17 95.5 159 32.1
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-17 95.5 160 32.5
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.2e-17 95.1 159 30.8
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.2e-17 95.1 160 31.9
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.2e-17 95.1 160 31.9
BcaB08g35205 Brassica carinata HOM05D008386 ORTHO05D010572 2.2e-17 95.1 129 40.3
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-17 94.7 160 31.9
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-17 94.4 160 31.9
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-17 94.4 162 31.5
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.9e-17 94.0 160 31.9
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.9e-17 94.0 159 31.4
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.9e-17 94.0 160 31.9
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 4.9e-17 94.0 488 25.2
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-16 92.8 367 28.1
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-16 92.4 159 30.8
BcaC01g01842 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-16 92.0 68 67.6
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 3.1e-16 91.3 132 35.6
BcaC03g16156 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-15 89.0 56 85.7
BcaC08g43697 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-15 89.0 73 64.4
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-15 89.0 318 26.4
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 3.5e-15 87.8 113 35.4
BcaC06g36213 Brassica carinata HOM05D006121 ORTHO05D091691 7.7e-15 86.7 164 42.7
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-14 85.5 361 25.2
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.3e-14 85.1 337 26.1
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.9e-14 84.7 159 30.2
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.8e-14 84.3 124 34.7
BcaC04g19410 Brassica carinata HOM05D006121 ORTHO05D009559 7.3e-13 80.1 49 85.7
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 7.3e-13 80.1 113 35.4
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 1.6e-12 79.0 262 24.8
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 3.6e-12 77.8 507 22.7
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 4.7e-12 77.4 483 23.2
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 6.1e-12 77.0 302 24.5
BcaC01g02164 Brassica carinata HOM05D008386 ORTHO05D010572 6.1e-12 77.0 187 31.6
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 6.1e-12 77.0 282 24.8
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.0e-12 76.6 299 26.1
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.8e-11 75.5 422 23.7
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 6.8e-11 73.6 76 53.9
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 8.9e-11 73.2 91 38.5
BcaC06g36095 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-10 71.2 47 80.9
BraA01t02430Z Brassica rapa HOM05D008386 ORTHO05D010572 3.4e-10 71.2 55 56.4
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 4.4e-10 70.9 280 23.2
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 9.8e-10 69.7 377 23.9
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-09 68.9 82 46.3
BcaC04g21297 Brassica carinata HOM05D006121 ORTHO05D095629 2.2e-09 68.6 49 73.5
BcaB06g27142 Brassica carinata HOM05D033500 ORTHO05D009559 1.4e-08 65.9 151 31.8
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-08 65.9 140 29.3
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 1.8e-08 65.5 498 23.1
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.8e-08 65.5 166 25.9
BolC3t19110H Brassica oleracea HOM05D006121 ORTHO05D043263 2.4e-08 65.1 45 68.9
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 2.4e-08 65.1 157 24.2
BcaB06g26791 Brassica carinata HOM05D033500 ORTHO05D009559 3.2e-08 64.7 147 32.7
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 3.2e-08 64.7 157 24.2
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 4.1e-08 64.3 178 25.3
BcaC08g42837 Brassica carinata HOM05D006121 ORTHO05D009559 5.4e-08 63.9 54 57.4
BcaC09g49541 Brassica carinata HOM05D006121 ORTHO05D009559 5.4e-08 63.9 181 29.8
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.2e-07 62.8 128 28.9
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-07 62.8 82 43.9
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-07 62.8 426 23.0
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-07 62.4 34 88.2
BraA06t25240Z Brassica rapa HOM05D006121 ORTHO05D013509 1.6e-07 62.4 60 58.3
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-07 62.4 128 28.1
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-07 62.0 280 26.1
BolC3t19363H Brassica oleracea HOM05D008386 ORTHO05D010572 2.0e-07 62.0 86 39.5
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 2.0e-07 62.0 135 28.1
BcaC02g11959 Brassica carinata HOM05D008386 ORTHO05D010572 2.7e-07 61.6 81 43.2
BolSC21t60224H Brassica oleracea HOM05D006121 ORTHO05D009559 3.5e-07 61.2 130 37.7
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 7.8e-07 60.1 161 26.7
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 1.0e-06 59.7 424 23.1
BcaC02g10719 Brassica carinata HOM05D008386 ORTHO05D010572 1.3e-06 59.3 81 40.7
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-06 59.3 89 38.2
BolC6t38412H Brassica oleracea HOM05D008386 ORTHO05D010572 1.3e-06 59.3 58 53.4
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-06 58.5 195 30.3
BcaB05g23675 Brassica carinata HOM05D006121 ORTHO05D016754 3.0e-06 58.2 134 28.4
BcaC05g27677 Brassica carinata HOM05D008386 ORTHO05D010572 3.0e-06 58.2 79 43.0
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 3.0e-06 58.2 422 22.3
BolC1t03080H Brassica oleracea HOM05D008386 ORTHO05D010572 3.9e-06 57.8 40 62.5
BolC8t48816H Brassica oleracea HOM05D008386 ORTHO05D010572 3.9e-06 57.8 184 28.8
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 8.6e-06 56.6 117 21.4
Carub.0004s1088 Capsella rubella HOM05D010629 ORTHO05D005680 8.6e-06 56.6 116 26.7
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 8.6e-06 56.6 125 25.6
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 8.6e-06 56.6 125 25.6


User provided reference genes

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