Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06794 Brassica carinata HOM05D012270 ORTHO05D014329 1.7e-62 242.7 140 100.0
BcaC01g06796 Brassica carinata HOM05D012270 ORTHO05D014329 1.7e-62 242.7 140 100.0
BolC3t16114H Brassica oleracea HOM05D012270 ORTHO05D014329 1.7e-62 242.7 140 100.0
C03p38330 Brassica napus HOM05D012270 ORTHO05D014329 1.4e-59 233.0 140 95.7
A03p31420 Brassica napus HOM05D012270 ORTHO05D014329 1.1e-53 213.4 140 88.6
BraA03t12323Z Brassica rapa HOM05D012270 ORTHO05D014329 1.1e-53 213.4 140 88.6
BcaB01g02391 Brassica carinata HOM05D012270 ORTHO05D014329 4.6e-39 164.9 128 82.0
Sp6g01750 Schrenkiella parvula HOM05D012270 ORTHO05D014329 1.9e-32 142.9 140 70.7
Thhalv10029175m.g Eutrema salsugineum HOM05D012270 ORTHO05D014329 7.4e-29 131.0 132 70.5
CARHR249880 Cardamine hirsuta HOM05D012270 ORTHO05D014329 1.0e-22 110.5 139 59.0
AL6G51390 Arabidopsis lyrata HOM05D012270 ORTHO05D014329 1.9e-21 106.3 93 62.4
AT4G01895 Arabidopsis thaliana HOM05D012270 ORTHO05D014329 1.9e-21 106.3 146 52.1
Carub.0006s3533 Capsella rubella HOM05D012270 ORTHO05D014329 1.8e-19 99.8 94 58.5
Aa31LG5G1460 Aethionema arabicum HOM05D012270 ORTHO05D014329 1.3e-17 93.6 129 55.8
Carub.0001s0152 Capsella rubella HOM05D010308 ORTHO05D012783 3.7e-12 75.5 138 38.4
Sp1g01520 Schrenkiella parvula HOM05D010308 ORTHO05D012783 5.3e-11 71.6 99 42.4
Thhalv10009031m.g Eutrema salsugineum HOM05D010308 ORTHO05D012783 2.6e-10 69.3 100 41.0
BcaC07g42393 Brassica carinata HOM05D010308 ORTHO05D012783 2.5e-08 62.8 131 36.6
CARHR001770 Cardamine hirsuta HOM05D010308 ORTHO05D012783 9.3e-08 60.8 72 47.2
A09p68710 Brassica napus HOM05D010308 ORTHO05D012783 1.6e-07 60.1 131 35.9
C08p53280 Brassica napus HOM05D010308 ORTHO05D012783 1.6e-07 60.1 131 35.9
A10p01240 Brassica napus HOM05D010308 ORTHO05D012783 2.7e-07 59.3 98 37.8
BraA09t42210Z Brassica rapa HOM05D010308 ORTHO05D012783 2.7e-07 59.3 133 35.3
C05p01240 Brassica napus HOM05D010308 ORTHO05D012783 7.9e-07 57.8 98 36.7
BcaC05g24625 Brassica carinata HOM05D010308 ORTHO05D004467 1.8e-06 56.6 76 42.1
BraA10t42402Z Brassica rapa HOM05D010308 ORTHO05D012783 1.8e-06 56.6 132 43.9
BolC8t52843H Brassica oleracea HOM05D010308 ORTHO05D012783 3.0e-06 55.8 94 39.4
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 3.0e-06 55.8 118 35.6
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 6.7e-06 54.7 102 37.3
BcaB03g15778 Brassica carinata HOM05D010308 ORTHO05D012783 8.7e-06 54.3 96 38.5
BcaC07g42314 Brassica carinata HOM05D010308 ORTHO05D012783 8.7e-06 54.3 73 41.1
BcaNung06865 Brassica carinata HOM05D010308 ORTHO05D012783 8.7e-06 54.3 96 38.5


User provided reference genes

Program Settings