Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 1.7e-66 255.8 123 100.0
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 1.7e-66 255.8 123 100.0
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 1.7e-66 255.8 123 100.0
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 9.5e-65 250.0 121 98.3
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 1.2e-64 249.6 120 98.3
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 1.6e-64 249.2 120 98.3
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 2.2e-61 238.8 123 91.1
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.3e-58 229.6 124 87.9
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 5.6e-57 224.2 123 84.6
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 4.7e-56 221.1 123 83.7
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 6.2e-56 220.7 123 82.1
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 8.1e-56 220.3 123 82.1
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 2.0e-54 215.7 121 82.6
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 2.9e-53 211.8 119 82.4
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 2.4e-52 208.8 123 77.2
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 3.4e-46 188.3 118 72.0
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 5.8e-46 187.6 117 72.6
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 9.9e-46 186.8 120 71.7
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 2.2e-45 185.7 118 71.2
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 6.4e-45 184.1 117 70.9
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 6.4e-45 184.1 118 69.5
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 3.2e-44 181.8 118 67.8
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.6e-43 179.5 117 69.2
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.1e-43 179.1 121 68.6
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 2.1e-43 179.1 117 68.4
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 2.1e-43 179.1 118 70.3
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 3.5e-43 178.3 117 68.4
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 6.0e-43 177.6 119 67.2
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 7.9e-43 177.2 117 68.4
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 1.8e-42 176.0 117 67.5
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 2.3e-42 175.6 117 68.4
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 3.0e-42 175.3 118 66.9
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 3.0e-42 175.3 118 67.8
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 5.1e-42 174.5 119 66.4
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 8.7e-42 173.7 119 65.5
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 1.1e-41 173.3 118 68.6
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.1e-41 173.3 118 66.9
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.1e-41 173.3 118 66.9
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.9e-41 172.6 120 65.8
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.9e-41 172.6 119 65.5
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.9e-41 172.6 119 64.7
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.9e-41 172.6 120 65.0
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 3.3e-41 171.8 117 69.2
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 4.3e-41 171.4 118 65.3
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 4.3e-41 171.4 117 68.4
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.6e-41 171.0 118 66.9
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 7.4e-41 170.6 120 64.2
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 7.4e-41 170.6 118 66.1
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 9.6e-41 170.2 118 66.1
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.3e-40 169.9 118 62.7
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.6e-40 169.5 120 63.3
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.6e-40 169.5 118 66.1
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 2.1e-40 169.1 117 65.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 2.8e-40 168.7 111 71.2
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 3.7e-40 168.3 117 65.8
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 3.7e-40 168.3 117 66.7
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 1.4e-39 166.4 117 65.0
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.8e-39 166.0 118 63.6
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 2.4e-39 165.6 119 62.2
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 5.3e-39 164.5 116 63.8
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 5.3e-39 164.5 118 65.3
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 6.9e-39 164.1 118 65.3
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 9.0e-39 163.7 119 60.5
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 9.0e-39 163.7 118 61.0
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 9.0e-39 163.7 117 62.4
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 2.0e-38 162.5 119 63.9
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.6e-38 162.2 119 63.0
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 3.4e-38 161.8 121 58.7
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 4.5e-38 161.4 109 67.9
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 5.8e-38 161.0 141 55.3
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 7.6e-38 160.6 109 66.1
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 4.2e-36 154.8 119 59.7
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.2e-36 154.8 116 62.9
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 7.1e-36 154.1 122 60.7
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 9.3e-36 153.7 118 59.3
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 5.1e-34 147.9 146 52.1
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 8.7e-34 147.1 99 68.7
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 5.6e-33 144.4 104 62.5
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 7.4e-33 144.1 113 59.3
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.6e-32 142.9 120 55.8
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.1e-31 138.7 96 65.6
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 3.8e-29 131.7 118 52.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 9.3e-28 127.1 119 50.4
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 1.0e-26 123.6 79 72.2
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 5.1e-26 121.3 80 68.8
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 3.7e-24 115.2 117 49.6
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 9.0e-23 110.5 115 47.8
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.2e-21 105.9 78 64.1
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 3.8e-21 105.1 79 63.3
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 6.5e-21 104.4 76 65.8
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 4.2e-20 101.7 91 57.1
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 1.3e-16 90.1 59 69.5
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 3.1e-15 85.5 104 41.3
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 9.4e-12 73.9 102 41.2
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 7.0e-07 57.8 41 58.5


User provided reference genes

Program Settings