Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06727 Brassica carinata HOM05D008819 ORTHO05D003197 4.1e-90 334.7 172 100.0
BolC3t16044H Brassica oleracea HOM05D008819 ORTHO05D003197 1.2e-70 270.0 196 76.5
C03p37510 Brassica napus HOM05D008819 ORTHO05D003197 4.9e-67 258.1 170 83.5
A06p16240 Brassica napus HOM05D008819 ORTHO05D003197 1.4e-66 256.5 206 69.9
BcaC05g25908 Brassica carinata HOM05D008819 ORTHO05D003197 6.0e-65 251.1 203 70.0
C05p18590 Brassica napus HOM05D008819 ORTHO05D003197 6.0e-65 251.1 203 70.0
BraA06t24727Z Brassica rapa HOM05D008819 ORTHO05D003197 1.3e-64 250.0 206 68.4
BolC5t30570H Brassica oleracea HOM05D008819 ORTHO05D003197 3.9e-64 248.4 203 69.5
BcaB07g32025 Brassica carinata HOM05D008819 ORTHO05D003197 2.1e-54 216.1 210 63.3
BcaNung03339 Brassica carinata HOM05D008819 ORTHO05D003197 1.9e-50 203.0 208 56.7
C07p23350 Brassica napus HOM05D008819 ORTHO05D003197 3.2e-50 202.2 208 56.7
BolC7t42868H Brassica oleracea HOM05D008819 ORTHO05D003197 5.4e-50 201.4 208 56.2
Sp1g17870 Schrenkiella parvula HOM05D008819 ORTHO05D003197 3.4e-44 182.2 220 51.4
Thhalv10008464m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 1.7e-43 179.9 209 53.6
Carub.0001s1963 Capsella rubella HOM05D008819 ORTHO05D003197 3.3e-39 165.6 210 52.9
AT1G20100 Arabidopsis thaliana HOM05D008819 ORTHO05D003197 1.6e-38 163.3 217 50.2
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 4.2e-34 148.7 224 44.6
BcaB03g14414 Brassica carinata HOM05D008819 ORTHO05D003197 6.0e-33 144.8 215 48.4
BcaB03g14340 Brassica carinata HOM05D008819 ORTHO05D003197 2.3e-32 142.9 215 48.4
Thhalv10019693m.g Eutrema salsugineum HOM05D008819 ORTHO05D003197 5.9e-28 128.3 224 42.0
AL2G35870 Arabidopsis lyrata HOM05D008819 ORTHO05D003197 7.6e-28 127.9 216 41.7
AT1G75860 Arabidopsis thaliana HOM05D008819 ORTHO05D003197 2.9e-27 125.9 216 43.1
BcaC03g14371 Brassica carinata HOM05D008819 ORTHO05D003197 6.5e-27 124.8 176 47.2
Aa31LG4G6060 Aethionema arabicum HOM05D008819 ORTHO05D003197 1.8e-24 116.7 224 38.4
CARHR020580 Cardamine hirsuta HOM05D008819 ORTHO05D003197 5.1e-24 115.2 168 45.2
Carub.0002s2277 Capsella rubella HOM05D008819 ORTHO05D003197 4.3e-23 112.1 217 39.2
Sp5g31000 Schrenkiella parvula HOM05D008819 ORTHO05D003197 9.7e-23 110.9 231 38.1
CARHR069410 Cardamine hirsuta HOM05D008819 ORTHO05D003197 2.2e-22 109.8 203 40.4
THA.LOC104809551 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 1.8e-21 106.7 233 35.2
BcaC08g47079 Brassica carinata HOM05D008819 ORTHO05D003197 1.0e-19 100.9 221 38.0
C02p17840 Brassica napus HOM05D008819 ORTHO05D003197 5.5e-18 95.1 103 56.3
A07p41430 Brassica napus HOM05D008819 ORTHO05D003197 9.4e-18 94.4 224 34.4
BolC6t40021H Brassica oleracea HOM05D008819 ORTHO05D003197 6.1e-17 91.7 227 34.8
BcaC08g47318 Brassica carinata HOM05D008819 ORTHO05D003197 1.8e-16 90.1 227 33.9
THA.LOC104813782 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 2.3e-16 89.7 208 36.1
A08p16950 Brassica napus HOM05D008819 ORTHO05D003197 3.3e-15 85.9 96 56.2
C06p49830 Brassica napus HOM05D008819 ORTHO05D003197 3.3e-15 85.9 227 33.9
AL2G36300 Arabidopsis lyrata HOM05D014797 ORTHO05D016596 6.5e-11 71.6 170 36.5
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 6.5e-11 71.6 211 32.2
THA.LOC104813240 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 7.2e-10 68.2 222 30.2
CARHR069790 Cardamine hirsuta HOM05D014797 ORTHO05D016596 1.2e-09 67.4 172 37.2
AT1G76230 Arabidopsis thaliana HOM05D014797 ORTHO05D016596 1.1e-07 60.8 153 34.6
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 8.2e-06 54.7 227 25.1


User provided reference genes

Program Settings