Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06682 Brassica carinata HOM05D013288 ORTHO05D013202 1.1e-109 400.2 229 100.0
C03p36800 Brassica napus HOM05D013288 ORTHO05D013202 1.1e-109 400.2 229 100.0
BolC3t15994H Brassica oleracea HOM05D013288 ORTHO05D013202 1.1e-109 400.2 229 100.0
AT1G80970 Arabidopsis thaliana HOM05D013288 ORTHO05D013202 5.8e-31 138.7 163 46.0
AT1G80990 Arabidopsis thaliana HOM05D013288 ORTHO05D013202 5.8e-23 112.1 159 40.3
Carub.0006s3725 Capsella rubella HOM05D013288 ORTHO05D013202 4.1e-21 105.9 150 40.7
BcaC01g06684 Brassica carinata HOM05D013288 ORTHO05D013202 7.1e-21 105.1 166 38.6
CARHR073390 Cardamine hirsuta HOM05D013288 ORTHO05D013202 4.3e-18 95.9 159 38.4
CARHR073420 Cardamine hirsuta HOM05D013288 ORTHO05D013202 1.4e-16 90.9 190 34.7
AL2G33920 Arabidopsis lyrata HOM05D020014 ORTHO05D013202 3.2e-13 79.7 163 32.5
BcaC08g47545 Brassica carinata HOM05D020014 ORTHO05D013202 2.1e-12 77.0 163 30.7
BraA07t31996Z Brassica rapa HOM05D020014 ORTHO05D013202 1.0e-11 74.7 163 30.1
C06p53700 Brassica napus HOM05D020014 ORTHO05D013202 1.7e-11 73.9 164 30.5
A07p44890 Brassica napus HOM05D020014 ORTHO05D013202 4.8e-09 65.9 156 28.2
Sp5g34980 Schrenkiella parvula HOM05D020014 ORTHO05D013202 6.2e-09 65.5 172 27.3
Thhalv10019666m.g Eutrema salsugineum HOM05D013288 ORTHO05D013202 2.0e-07 60.5 161 31.7


User provided reference genes

Program Settings