Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06640 Brassica carinata HOM05D011611 ORTHO05D012556 1.9e-66 255.8 133 100.0
BcaB01g04504 Brassica carinata HOM05D011611 ORTHO05D012556 1.7e-59 232.6 134 95.5
Sp6g20280 Schrenkiella parvula HOM05D011611 ORTHO05D012556 1.0e-43 180.3 148 73.6
BolC3t13866H Brassica oleracea HOM05D011611 ORTHO05D012556 9.4e-42 173.7 148 72.3
BcaC01g06641 Brassica carinata HOM05D011611 ORTHO05D012556 8.8e-40 167.2 141 70.2
BcaNung06850 Brassica carinata HOM05D011611 ORTHO05D012556 8.8e-40 167.2 141 70.2
C09p50580 Brassica napus HOM05D011611 ORTHO05D012556 1.2e-36 156.8 148 69.6
BolC9t57913H Brassica oleracea HOM05D011611 ORTHO05D012556 2.9e-35 152.1 138 72.5
BraA10t43665Z Brassica rapa HOM05D000086 ORTHO05D012556 6.5e-35 151.0 147 66.0
C03p14200 Brassica napus HOM05D011611 ORTHO05D012556 8.5e-35 150.6 145 66.2
BraA03t10523Z Brassica rapa HOM05D011611 ORTHO05D012556 8.5e-35 150.6 145 66.2
A03p12110 Brassica napus HOM05D000157 ORTHO05D012556 5.5e-34 147.9 143 65.7
BcaB08g36194 Brassica carinata HOM05D000086 ORTHO05D012556 3.6e-33 145.2 146 67.8
A10p15690 Brassica napus HOM05D000086 ORTHO05D012556 6.8e-32 141.0 149 63.8
CARHR272430 Cardamine hirsuta HOM05D000157 ORTHO05D012556 8.8e-32 140.6 137 67.9
BcaC03g14086 Brassica carinata HOM05D011611 ORTHO05D032485 2.8e-30 135.6 128 65.6
BolC2t07442H Brassica oleracea HOM05D011611 ORTHO05D032485 5.3e-29 131.3 126 65.1
Thhalv10015679m.g Eutrema salsugineum HOM05D000086 ORTHO05D012556 9.1e-29 130.6 141 63.1
BcaC01g06638 Brassica carinata HOM05D011611 ORTHO05D012556 2.7e-28 129.0 90 81.1
C02p13270 Brassica napus HOM05D011611 ORTHO05D032485 7.7e-28 127.5 127 64.6
AL8G34820 Arabidopsis lyrata HOM05D000086 ORTHO05D012556 1.7e-22 109.8 143 56.6
AT5G58580 Arabidopsis thaliana HOM05D000086 ORTHO05D012556 3.5e-20 102.1 144 51.4
Carub.0008s1920 Capsella rubella HOM05D000157 ORTHO05D012556 2.1e-17 92.8 74 68.9
Aa31LG11G360 Aethionema arabicum HOM05D000157 ORTHO05D012556 5.2e-16 88.2 129 52.7
A02p07650 Brassica napus HOM05D011611 ORTHO05D097536 1.5e-10 70.1 94 56.4
BcaNung06851 Brassica carinata HOM05D011611 ORTHO05D093433 2.0e-07 59.7 56 58.9


User provided reference genes

Program Settings