Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06538 Brassica carinata HOM05D001498 ORTHO05D016036 9.6e-68 260.0 128 100.0
BraA08t32832Z Brassica rapa HOM05D001498 ORTHO05D011263 5.5e-55 217.6 121 87.6
BraA08t32773Z Brassica rapa HOM05D001498 ORTHO05D011263 2.7e-54 215.3 121 86.0
BraA10t42921Z Brassica rapa HOM05D001498 ORTHO05D011263 3.0e-53 211.8 121 85.1
BraA08t32949Z Brassica rapa HOM05D001498 ORTHO05D011263 6.7e-53 210.7 121 85.1
BraA09t38881Z Brassica rapa HOM05D001498 ORTHO05D013028 6.7e-53 210.7 121 85.1
BolC5t32219H Brassica oleracea HOM05D001498 ORTHO05D016036 1.3e-51 206.5 119 84.9
BolC3t16976H Brassica oleracea HOM05D001498 ORTHO05D011263 4.5e-49 198.0 110 89.1
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 5.8e-49 197.6 108 89.8
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 2.2e-48 195.7 108 88.9
BraA01t03045Z Brassica rapa HOM05D001498 ORTHO05D011263 6.5e-48 194.1 108 88.0
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 3.2e-47 191.8 108 86.1
A01p20530 Brassica napus HOM05D001498 ORTHO05D013028 9.3e-47 190.3 107 86.9
BolC3t17912H Brassica oleracea HOM05D001498 ORTHO05D011263 2.1e-46 189.1 108 87.0
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 3.5e-46 188.3 103 90.3
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 3.9e-45 184.9 103 88.3
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 8.5e-40 167.2 96 85.4
BcaC09g50110 Brassica carinata HOM05D001498 ORTHO05D016036 3.2e-39 165.2 102 85.3
BolC3t19485H Brassica oleracea HOM05D001498 ORTHO05D016036 1.2e-38 163.3 88 93.2
BcaC05g28432 Brassica carinata HOM05D001498 ORTHO05D016036 1.8e-37 159.5 103 83.5
A01p28570 Brassica napus HOM05D001498 ORTHO05D013028 1.8e-37 159.5 95 83.2
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 3.0e-37 158.7 95 82.1
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 4.3e-36 154.8 91 87.9
BolC9t54651H Brassica oleracea HOM05D001498 ORTHO05D016036 1.2e-33 146.7 85 87.1
BolC1t04861H Brassica oleracea HOM05D001498 ORTHO05D016036 6.7e-29 131.0 110 66.4
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 5.7e-28 127.9 122 60.7
BcaB06g26725 Brassica carinata HOM05D001498 ORTHO05D016036 3.7e-27 125.2 68 91.2
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-26 123.6 68 91.2
BcaB01g01815 Brassica carinata HOM05D001498 ORTHO05D016036 3.1e-26 122.1 68 91.2
A09p33370 Brassica napus HOM05D001379 ORTHO05D001277 3.1e-26 122.1 64 87.5
BcaB07g33756 Brassica carinata HOM05D001498 ORTHO05D003542 5.9e-25 117.9 68 89.7
BcaC04g22592 Brassica carinata HOM05D001498 ORTHO05D019943 5.9e-25 117.9 68 88.2
BcaC02g09115 Brassica carinata HOM05D001498 ORTHO05D027369 1.7e-24 116.3 108 57.4
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 4.2e-23 111.7 68 83.8
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 7.2e-23 110.9 65 86.2
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 7.2e-23 110.9 65 86.2
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 7.2e-23 110.9 65 86.2
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 9.4e-23 110.5 65 86.2
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-22 110.2 64 87.5
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 1.6e-22 109.8 65 84.6
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 1.6e-22 109.8 65 84.6
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 3.6e-22 108.6 65 83.1
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 4.7e-22 108.2 65 83.1
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 8.0e-22 107.5 65 83.1
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 1.8e-21 106.3 64 85.9
BcaB07g33082 Brassica carinata HOM05D001498 ORTHO05D016036 5.7e-20 101.3 56 91.1
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-19 99.8 59 84.7
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 3.7e-19 98.6 60 83.3
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-17 91.3 76 67.1
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 1.3e-16 90.1 116 48.3
A10p06860 Brassica napus HOM05D001498 ORTHO05D013028 9.4e-15 84.0 48 87.5
C06p23320 Brassica napus HOM05D001498 ORTHO05D019943 4.0e-13 78.6 45 88.9
A03p54360 Brassica napus HOM05D001498 ORTHO05D013028 2.6e-12 75.9 42 90.5
BcaC06g36689 Brassica carinata HOM05D001498 ORTHO05D091472 7.5e-12 74.3 42 88.1
BcaB07g32208 Brassica carinata HOM05D001498 ORTHO05D027369 8.3e-11 70.9 43 83.7
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 2.4e-10 69.3 38 89.5
C04p56110 Brassica napus HOM05D001498 ORTHO05D019943 2.0e-09 66.2 42 81.0
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 4.5e-09 65.1 44 75.0
C09p28450 Brassica napus HOM05D001498 ORTHO05D027369 4.5e-09 65.1 42 78.6
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 4.2e-07 58.5 30 90.0
BolC1t00858H Brassica oleracea HOM05D001498 ORTHO05D013028 1.6e-06 56.6 29 89.7


User provided reference genes

Program Settings