Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06537 Brassica carinata HOM05D001498 ORTHO05D011448 2.8e-149 531.9 276 100.0
C03p80470 Brassica napus HOM05D001498 ORTHO05D011448 1.9e-137 492.7 272 91.2
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 5.5e-137 491.1 272 91.9
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 9.4e-137 490.3 263 95.4
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 4.7e-136 488.0 272 93.8
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-135 486.5 272 93.4
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 5.2e-135 484.6 272 90.1
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.2e-134 483.4 272 90.1
C03p75890 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-134 482.6 272 93.0
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-134 482.6 272 89.3
C08p17900 Brassica napus HOM05D001498 ORTHO05D011448 9.7e-134 480.3 272 89.3
C07p30740 Brassica napus HOM05D001498 ORTHO05D011448 3.7e-133 478.4 267 90.6
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 1.8e-132 476.1 271 91.9
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 2.2e-130 469.2 271 90.8
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 5.0e-130 468.0 271 91.1
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 9.4e-129 463.8 271 89.3
BcaB04g18488 Brassica carinata HOM05D001498 ORTHO05D011448 6.8e-127 457.6 271 85.6
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 5.4e-124 448.0 252 90.1
A08p08110 Brassica napus HOM05D001498 ORTHO05D011448 5.9e-123 444.5 267 88.4
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 7.7e-123 444.1 252 90.1
C04p36720 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-120 436.8 278 82.4
C03p66020 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-119 431.8 235 93.6
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 2.0e-118 429.5 252 86.5
C05p34950 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-118 429.5 235 93.2
BcaC07g38655 Brassica carinata HOM05D001498 ORTHO05D011448 7.3e-113 411.0 267 79.8
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 1.2e-110 403.7 236 88.1
BolC3t18909H Brassica oleracea HOM05D001498 ORTHO05D011448 5.8e-110 401.4 228 88.6
BcaC02g10288 Brassica carinata HOM05D001498 ORTHO05D011448 2.7e-107 392.5 235 87.7
BolC9t57314H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-106 390.2 233 85.4
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 6.4e-101 371.3 213 88.7
C03p44600 Brassica napus HOM05D001498 ORTHO05D011448 3.2e-100 369.0 234 82.1
C08p08890 Brassica napus HOM05D001498 ORTHO05D011448 9.2e-100 367.5 204 91.7
BolC3t13783H Brassica oleracea HOM05D001498 ORTHO05D011448 8.6e-98 360.9 179 100.0
BolC6t36734H Brassica oleracea HOM05D001498 ORTHO05D011448 4.4e-94 348.6 196 91.3
C07p01260 Brassica napus HOM05D001498 ORTHO05D011448 2.5e-89 332.8 180 94.4
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 2.8e-88 329.3 190 87.9
C03p56240 Brassica napus HOM05D001498 ORTHO05D011448 2.4e-84 316.2 222 80.2
C02p53480 Brassica napus HOM05D001498 ORTHO05D011448 5.4e-84 315.1 185 91.9
BolC7t40542H Brassica oleracea HOM05D001498 ORTHO05D104051 4.6e-83 312.0 233 71.7
C08p06700 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-80 303.9 183 85.8
A10p06620 Brassica napus HOM05D001498 ORTHO05D011448 2.8e-80 302.8 175 89.7
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 5.2e-79 298.5 184 89.7
A07p02030 Brassica napus HOM05D001498 ORTHO05D011448 1.5e-78 297.0 213 77.0
BolC6t38704H Brassica oleracea HOM05D001498 ORTHO05D011448 8.4e-77 291.2 160 91.2
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 4.2e-76 288.9 229 69.0
C09p21190 Brassica napus HOM05D001498 ORTHO05D011448 7.8e-75 284.6 201 81.1
C06p18080 Brassica napus HOM05D001498 ORTHO05D011878 3.4e-70 269.2 146 93.8
BraA08t32832Z Brassica rapa HOM05D001498 ORTHO05D011263 7.1e-68 261.5 212 69.3
C09p28440 Brassica napus HOM05D001498 ORTHO05D013033 7.9e-67 258.1 145 89.0
BolC3t19486H Brassica oleracea HOM05D001498 ORTHO05D013033 6.7e-66 255.0 129 95.3
BraA01t03045Z Brassica rapa HOM05D001498 ORTHO05D011263 5.6e-65 251.9 212 67.0
BolC3t17912H Brassica oleracea HOM05D001498 ORTHO05D011263 3.1e-63 246.1 212 65.6
BraA08t32949Z Brassica rapa HOM05D001498 ORTHO05D011263 5.8e-62 241.9 212 64.6
BraA08t32773Z Brassica rapa HOM05D001498 ORTHO05D011263 2.3e-58 229.9 212 64.2
BolC3t16976H Brassica oleracea HOM05D001498 ORTHO05D011263 3.0e-58 229.6 212 63.2
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 4.9e-53 212.2 124 87.1
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 1.6e-51 207.2 124 84.7
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 2.1e-51 206.8 223 55.6
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 1.3e-50 204.1 124 83.9
BolC7t45419H Brassica oleracea HOM05D001498 ORTHO05D011878 6.7e-50 201.8 116 88.8
BolC9t54650H Brassica oleracea HOM05D001498 ORTHO05D013033 5.7e-49 198.7 98 98.0
BraA01t01982Z Brassica rapa HOM05D001498 ORTHO05D013028 9.7e-49 198.0 119 93.3
BcaC09g49625 Brassica carinata HOM05D001498 ORTHO05D031765 3.4e-46 189.5 212 48.6
A01p28570 Brassica napus HOM05D001498 ORTHO05D013028 5.9e-46 188.7 115 92.2
A08p07520 Brassica napus HOM05D001498 ORTHO05D013033 7.7e-46 188.3 94 96.8
BolC1t04860H Brassica oleracea HOM05D001498 ORTHO05D013033 7.7e-46 188.3 94 96.8
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 5.0e-45 185.7 124 79.0
BcaB04g18117 Brassica carinata HOM05D001498 ORTHO05D008559 6.1e-43 178.7 113 80.5
C09p27450 Brassica napus HOM05D001498 ORTHO05D013033 7.9e-43 178.3 95 93.7
BolC2t11286H Brassica oleracea HOM05D001498 ORTHO05D013028 2.8e-40 169.9 104 84.6
BolC1t00858H Brassica oleracea HOM05D001498 ORTHO05D013028 3.7e-40 169.5 104 83.7
BcaB01g03185 Brassica carinata HOM05D001498 ORTHO05D013028 4.8e-40 169.1 108 77.8
C07p38520 Brassica napus HOM05D001498 ORTHO05D041705 1.1e-39 167.9 175 57.1
C04p21390 Brassica napus HOM05D001498 ORTHO05D013033 1.4e-39 167.5 83 97.6
A10p06860 Brassica napus HOM05D001498 ORTHO05D013028 2.4e-39 166.8 104 83.7
A10p06870 Brassica napus HOM05D001498 ORTHO05D013033 2.4e-39 166.8 86 94.2
A01p20530 Brassica napus HOM05D001498 ORTHO05D013028 4.1e-39 166.0 104 93.3
C06p23310 Brassica napus HOM05D001498 ORTHO05D013033 6.9e-39 165.2 84 95.2
A09p33380 Brassica napus HOM05D001498 ORTHO05D013033 1.2e-38 164.5 84 95.2
BraA09t38880Z Brassica rapa HOM05D001498 ORTHO05D013033 1.2e-38 164.5 84 95.2
BraA09t38881Z Brassica rapa HOM05D001498 ORTHO05D013028 2.0e-38 163.7 104 90.4
C06p31040 Brassica napus HOM05D001498 ORTHO05D013033 4.2e-36 156.0 79 94.9
BcaC05g26791 Brassica carinata HOM05D001498 ORTHO05D013028 1.6e-35 154.1 94 87.2
BraA09t40145Z Brassica rapa HOM05D001498 ORTHO05D013033 2.7e-35 153.3 88 88.6
BolC6t37504H Brassica oleracea HOM05D001498 ORTHO05D013033 1.1e-33 147.9 73 98.6
BraA03t14501Z Brassica rapa HOM05D001498 ORTHO05D013028 2.6e-33 146.7 91 85.7
C01p34360 Brassica napus HOM05D001498 ORTHO05D031765 5.7e-33 145.6 140 52.9
BolC1t03406H Brassica oleracea HOM05D001498 ORTHO05D031765 5.7e-33 145.6 140 52.9
BcaB01g01632 Brassica carinata HOM05D001498 ORTHO05D091966 9.7e-33 144.8 271 42.1
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 7.0e-31 138.7 117 63.2
BcaC02g09115 Brassica carinata HOM05D001498 ORTHO05D027369 1.2e-30 137.9 77 85.7
BcaC07g38852 Brassica carinata HOM05D001498 ORTHO05D092219 1.2e-30 137.9 120 66.7
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-30 137.9 77 98.7
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 1.2e-30 137.9 77 85.7
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 2.0e-30 137.1 144 46.5
BcaB06g26019 Brassica carinata HOM05D001498 ORTHO05D091241 2.6e-30 136.7 134 59.7
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 3.5e-30 136.3 146 47.9
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 4.5e-30 136.0 146 47.3
A03p54360 Brassica napus HOM05D001498 ORTHO05D013028 4.5e-30 136.0 89 91.0
C01p45320 Brassica napus HOM05D007818 ORTHO05D011878 4.5e-30 136.0 146 47.3
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 4.5e-30 136.0 124 50.8
BcaC01g03920 Brassica carinata HOM05D001498 ORTHO05D091853 7.7e-30 135.2 213 44.6
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 1.3e-29 134.4 146 47.9
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 1.7e-29 134.0 140 47.1
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 2.2e-29 133.7 124 50.0
C02p15660 Brassica napus HOM05D007818 ORTHO05D011878 3.8e-29 132.9 146 46.6
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 3.8e-29 132.9 146 46.6
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 8.5e-29 131.7 146 46.6
BraA03t15276Z Brassica rapa HOM05D007818 ORTHO05D011878 1.1e-28 131.3 123 48.8
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 1.9e-28 130.6 77 80.5
BolC6t36717H Brassica oleracea HOM05D007818 ORTHO05D011878 2.5e-28 130.2 123 49.6
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 2.5e-28 130.2 146 45.2
BcaC06g36234 Brassica carinata HOM05D007818 ORTHO05D018576 5.5e-28 129.0 146 44.5
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 9.4e-28 128.3 123 48.8
BolC3t19390H Brassica oleracea HOM05D007818 ORTHO05D018576 1.4e-26 124.4 215 37.2
BraA10t42921Z Brassica rapa HOM05D001498 ORTHO05D011263 1.4e-26 124.4 79 91.1
BcaC08g42821 Brassica carinata HOM05D007818 ORTHO05D018576 2.6e-25 120.2 296 34.8
BolC4t23619H Brassica oleracea HOM05D007818 ORTHO05D018576 3.3e-25 119.8 127 46.5
BolC9t59179H Brassica oleracea HOM05D007818 ORTHO05D011878 2.4e-23 113.6 108 48.1
C09p17590 Brassica napus HOM05D001498 ORTHO05D013033 4.1e-23 112.8 55 98.2
BolC1t04861H Brassica oleracea HOM05D001498 ORTHO05D016036 5.3e-23 112.5 81 77.8
BcaC04g19840 Brassica carinata HOM05D007818 ORTHO05D018576 7.0e-23 112.1 141 39.7
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 3.5e-22 109.8 108 47.2
BolC6t36793H Brassica oleracea HOM05D007818 ORTHO05D011878 5.9e-22 109.0 118 48.3
BcaC05g28432 Brassica carinata HOM05D001498 ORTHO05D016036 7.7e-22 108.6 90 64.4
BcaB07g32208 Brassica carinata HOM05D001498 ORTHO05D027369 1.9e-20 104.0 61 86.9
BcaC05g28434 Brassica carinata HOM05D001498 ORTHO05D013033 7.2e-20 102.1 68 75.0
BolC8t47734H Brassica oleracea HOM05D001498 ORTHO05D032596 7.2e-20 102.1 58 81.0
BolC1t02816H Brassica oleracea HOM05D001498 ORTHO05D032596 2.1e-19 100.5 58 81.0
BcaB03g16299 Brassica carinata HOM05D001498 ORTHO05D096066 2.7e-19 100.1 81 70.4
BcaC01g02373 Brassica carinata HOM05D001498 ORTHO05D094875 2.0e-17 94.0 70 72.9
BcaC09g49197 Brassica carinata HOM05D007818 ORTHO05D011878 3.3e-17 93.2 84 52.4
BolC9t56135H Brassica oleracea HOM05D007818 ORTHO05D011878 7.5e-17 92.0 122 39.3
BolC3t18861H Brassica oleracea HOM05D001498 ORTHO05D041705 9.7e-17 91.7 120 47.5
BraSC37t46122Z Brassica rapa HOM05D007818 ORTHO05D011878 9.7e-17 91.7 85 50.6
C01p48070 Brassica napus HOM05D007818 ORTHO05D000013 1.3e-16 91.3 87 50.6
C04p55370 Brassica napus HOM05D007818 ORTHO05D000013 1.7e-16 90.9 85 50.6
C05p44350 Brassica napus HOM05D007818 ORTHO05D000013 1.7e-16 90.9 80 52.5
C07p06900 Brassica napus HOM05D007818 ORTHO05D000013 1.7e-16 90.9 82 52.4
C05p45440 Brassica napus HOM05D007818 ORTHO05D000013 2.8e-16 90.1 85 49.4
C07p00660 Brassica napus HOM05D007818 ORTHO05D000013 2.8e-16 90.1 85 49.4
BcaB01g01482 Brassica carinata HOM05D001498 ORTHO05D095356 1.8e-15 87.4 60 65.0
A10p08820 Brassica napus HOM05D007818 ORTHO05D011878 2.4e-15 87.0 85 48.2
C07p08980 Brassica napus HOM05D007818 ORTHO05D011878 2.4e-15 87.0 90 50.0
BcaB05g23550 Brassica carinata HOM05D001498 ORTHO05D094912 5.3e-15 85.9 59 67.8
C06p26590 Brassica napus HOM05D007818 ORTHO05D015522 5.3e-15 85.9 93 45.2
C01p38670 Brassica napus HOM05D001498 ORTHO05D013033 7.0e-15 85.5 42 92.9
BraA09t37757Z Brassica rapa HOM05D007818 ORTHO05D015532 7.0e-15 85.5 85 50.6
BolC6t36237H Brassica oleracea HOM05D001498 ORTHO05D013033 2.7e-14 83.6 42 92.9
BolC3t19185H Brassica oleracea HOM05D007818 ORTHO05D011878 3.5e-14 83.2 128 35.9
BolC4t22585H Brassica oleracea HOM05D007818 ORTHO05D018576 1.3e-13 81.3 102 43.1
BcaB03g16424 Brassica carinata HOM05D007818 ORTHO05D011878 2.2e-13 80.5 93 44.1
BcaB03g16193 Brassica carinata HOM05D001498 ORTHO05D092429 8.5e-13 78.6 69 58.0
BcaB05g22882 Brassica carinata HOM05D007818 ORTHO05D011878 8.5e-13 78.6 93 40.9
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-12 77.8 87 52.9
BcaC04g22592 Brassica carinata HOM05D001498 ORTHO05D019943 1.5e-12 77.8 53 67.9
BcaB01g03193 Brassica carinata HOM05D000627 ORTHO05D011138 9.4e-12 75.1 104 44.2
C03p66160 Brassica napus HOM05D007818 ORTHO05D041367 1.2e-11 74.7 116 34.5
C07p11030 Brassica napus HOM05D007818 ORTHO05D011878 1.2e-11 74.7 70 48.6
BcaB07g33081 Brassica carinata HOM05D001498 ORTHO05D092546 1.6e-11 74.3 62 56.5
C07p08860 Brassica napus HOM05D007818 ORTHO05D042921 1.6e-11 74.3 114 34.2
BolC7t41300H Brassica oleracea HOM05D007818 ORTHO05D042921 1.6e-11 74.3 114 34.2
BolC3t18888H Brassica oleracea HOM05D007818 ORTHO05D041367 2.1e-11 73.9 116 34.5
C04p56140 Brassica napus HOM05D001498 ORTHO05D013033 6.1e-11 72.4 36 94.4
BcaB06g26756 Brassica carinata HOM05D007818 ORTHO05D011878 1.4e-10 71.2 108 39.8
C04p47800 Brassica napus HOM05D007818 ORTHO05D014962 1.8e-10 70.9 286 27.3
BcaC01g01870 Brassica carinata HOM05D007818 ORTHO05D018576 8.8e-10 68.6 76 46.1
BcaB07g33901 Brassica carinata HOM05D007818 ORTHO05D011878 1.5e-09 67.8 63 50.8
BcaC07g38851 Brassica carinata HOM05D001498 ORTHO05D094988 2.6e-09 67.0 58 63.8
BolC2t11285H Brassica oleracea HOM05D001498 ORTHO05D106766 4.4e-09 66.2 39 87.2
BcaC03g13778 Brassica carinata HOM05D001498 ORTHO05D095664 9.8e-09 65.1 39 74.4
BcaC05g26853 Brassica carinata HOM05D007818 ORTHO05D011878 9.8e-09 65.1 91 41.8
BcaB06g27860 Brassica carinata HOM05D001498 ORTHO05D093480 3.7e-08 63.2 26 100.0
C04p05450 Brassica napus HOM05D007818 ORTHO05D011878 2.4e-07 60.5 58 53.4
BcaC09g51129 Brassica carinata HOM05D001498 ORTHO05D032596 4.1e-07 59.7 40 67.5
C06p04890 Brassica napus HOM05D007818 ORTHO05D011878 4.1e-07 59.7 59 45.8
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 5.4e-07 59.3 59 47.5
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 9.1e-07 58.5 174 25.9
C07p12870 Brassica napus HOM05D007818 ORTHO05D011878 1.2e-06 58.2 42 59.5
BcaC09g50111 Brassica carinata HOM05D001498 ORTHO05D092056 2.7e-06 57.0 52 67.3
BcaB06g25861 Brassica carinata HOM05D006142 ORTHO05D023852 3.5e-06 56.6 107 29.0
BcaC02g08300 Brassica carinata HOM05D001498 ORTHO05D094068 5.9e-06 55.8 60 51.7
BcaC08g43732 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-06 55.8 121 42.1


User provided reference genes

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