Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06451 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-69 266.5 131 100.0
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-58 229.9 154 77.9
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 7.8e-49 197.2 177 61.6
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 9.6e-47 190.3 178 59.6
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 9.6e-47 190.3 178 59.6
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 9.6e-47 190.3 181 58.6
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 9.6e-47 190.3 181 58.6
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 1.2e-46 189.9 180 58.9
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-45 185.7 174 59.2
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 5.2e-45 184.5 179 58.1
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 5.2e-45 184.5 179 58.1
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 6.8e-45 184.1 178 57.9
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-44 183.3 176 58.0
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 5.8e-44 181.0 178 57.3
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 6.2e-38 161.0 179 54.2
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 8.4e-35 150.6 144 61.1
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 6.9e-29 131.0 145 52.4
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 8.4e-27 124.0 78 75.6
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 6.7e-24 114.4 179 40.8
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 5.6e-23 111.3 172 41.3
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 9.6e-23 110.5 163 42.3
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 2.8e-22 109.0 192 39.1
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-21 106.7 166 40.4
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 9.0e-21 104.0 179 38.5
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 9.0e-21 104.0 179 38.5
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-20 103.2 145 46.2
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 4.9e-19 98.2 138 43.5
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-17 93.6 179 36.9
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.9e-16 88.6 153 39.9
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 1.6e-14 83.2 141 40.4
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 2.1e-14 82.8 179 35.2
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 5.3e-13 78.2 142 35.9
CARHR048280 Cardamine hirsuta HOM05D007210 ORTHO05D006152 4.6e-09 65.1 86 41.9
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 9.7e-07 57.4 64 46.9
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.6e-06 56.6 70 42.9
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.8e-06 55.8 60 48.3


User provided reference genes

Program Settings