Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06375 Brassica carinata HOM05D000285 ORTHO05D093381 1.2e-55 219.5 108 100.0
BcaB01g04361 Brassica carinata HOM05D000285 ORTHO05D000241 1.0e-41 173.3 96 90.6
BraA03t10698Z Brassica rapa HOM05D000285 ORTHO05D000241 2.5e-29 132.1 104 73.1
A03p13990 Brassica napus HOM05D000285 ORTHO05D000241 3.3e-29 131.7 104 73.1
C03p16430 Brassica napus HOM05D000285 ORTHO05D000241 9.7e-29 130.2 104 72.1
BcaC01g06374 Brassica carinata HOM05D000285 ORTHO05D000241 3.7e-28 128.3 104 71.2
Sp6g17440 Schrenkiella parvula HOM05D000285 ORTHO05D000241 1.2e-26 123.2 114 64.9
AL8G31100 Arabidopsis lyrata HOM05D000285 ORTHO05D000241 1.3e-25 119.8 109 63.3
Carub.0008s1591 Capsella rubella HOM05D000285 ORTHO05D000241 1.3e-25 119.8 109 63.3
AT5G55550 Arabidopsis thaliana HOM05D000285 ORTHO05D000241 1.6e-23 112.8 109 61.5
Thhalv10013607m.g Eutrema salsugineum HOM05D000285 ORTHO05D000241 1.4e-19 99.8 112 58.9
Aa31LG3G11490 Aethionema arabicum HOM05D000285 ORTHO05D000241 5.3e-19 97.8 109 55.0
Sp7g24620 Schrenkiella parvula HOM05D000285 ORTHO05D000241 9.4e-16 87.0 107 52.3
Thhalv10025172m.g Eutrema salsugineum HOM05D000285 ORTHO05D000241 6.1e-15 84.3 107 52.3
AT4G26650 Arabidopsis thaliana HOM05D000285 ORTHO05D000241 3.9e-14 81.6 107 50.5
C01p22710 Brassica napus HOM05D000285 ORTHO05D000241 3.9e-14 81.6 107 49.5
CARHR234250 Cardamine hirsuta HOM05D000285 ORTHO05D000241 3.9e-14 81.6 107 50.5
BolC1t02200H Brassica oleracea HOM05D000285 ORTHO05D000241 5.2e-14 81.3 107 48.6
Carub.0007s1422 Capsella rubella HOM05D000285 ORTHO05D000241 2.0e-13 79.3 107 49.5
A01p17910 Brassica napus HOM05D000285 ORTHO05D000241 2.6e-13 79.0 109 47.7
BcaC09g50631 Brassica carinata HOM05D000285 ORTHO05D000241 3.3e-13 78.6 100 51.0
BcaC09g52250 Brassica carinata HOM05D000285 ORTHO05D000241 5.7e-13 77.8 106 48.1
AL7G26230 Arabidopsis lyrata HOM05D000285 ORTHO05D000241 2.8e-12 75.5 97 50.5
BcaC06g32734 Brassica carinata HOM05D000285 ORTHO05D000241 2.6e-10 68.9 110 46.4
C07p55240 Brassica napus HOM05D000285 ORTHO05D000241 1.3e-09 66.6 102 52.9
BraA01t01745Z Brassica rapa HOM05D000285 ORTHO05D000241 6.5e-09 64.3 107 43.9
THA.LOC104817697 Tarenaya hassleriana HOM05D000285 ORTHO05D000241 2.1e-07 59.3 110 45.5
THA.LOC104813442 Tarenaya hassleriana HOM05D000285 ORTHO05D000241 8.0e-07 57.4 111 44.1


User provided reference genes

Program Settings