Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06203 Brassica carinata HOM05D001976 ORTHO05D001960 9.6e-59 229.9 115 100.0
BcaB01g04213 Brassica carinata HOM05D001976 ORTHO05D001960 1.6e-21 106.3 60 96.7
BcaC01g06205 Brassica carinata HOM05D001976 ORTHO05D001960 1.1e-17 93.6 60 85.0
BolC3t14216H Brassica oleracea HOM05D001976 ORTHO05D001960 1.1e-17 93.6 60 85.0
C03p18130 Brassica napus HOM05D001976 ORTHO05D001960 1.2e-16 90.1 60 81.7
A03p15540 Brassica napus HOM05D001976 ORTHO05D001960 3.4e-16 88.6 60 81.7
BraA03t10846Z Brassica rapa HOM05D001976 ORTHO05D001960 3.4e-16 88.6 60 81.7
BcaC03g14490 Brassica carinata HOM05D001976 ORTHO05D001960 1.3e-15 86.7 60 76.7
C02p19220 Brassica napus HOM05D001976 ORTHO05D001960 1.3e-15 86.7 60 76.7
BolC2t08055H Brassica oleracea HOM05D001976 ORTHO05D001960 1.3e-15 86.7 60 76.7
A02p11540 Brassica napus HOM05D001976 ORTHO05D001960 8.5e-15 84.0 56 80.4
BraA02t06218Z Brassica rapa HOM05D001976 ORTHO05D001960 8.5e-15 84.0 56 80.4
Sp6g15030 Schrenkiella parvula HOM05D001976 ORTHO05D001960 5.5e-14 81.3 65 72.3
A10p10320 Brassica napus HOM05D001976 ORTHO05D001960 1.6e-13 79.7 57 82.5
BraA10t43112Z Brassica rapa HOM05D001976 ORTHO05D001960 1.6e-13 79.7 57 82.5
Thhalv10013997m.g Eutrema salsugineum HOM05D001976 ORTHO05D001960 2.5e-11 72.4 47 83.0
C09p42480 Brassica napus HOM05D001976 ORTHO05D001960 3.3e-11 72.0 56 76.8
BolC9t57126H Brassica oleracea HOM05D001976 ORTHO05D001960 3.3e-11 72.0 56 76.8
BcaB08g35640 Brassica carinata HOM05D001976 ORTHO05D001960 4.3e-11 71.6 56 75.0
BcaC04g20533 Brassica carinata HOM05D001976 ORTHO05D001960 7.4e-11 70.9 56 75.0
THA.LOC104811941 Tarenaya hassleriana HOM05D001976 ORTHO05D001960 1.1e-09 67.0 56 67.9
AL453U10010 Arabidopsis lyrata HOM05D001976 ORTHO05D001960 1.0e-07 60.5 57 63.2
AT5G52870 Arabidopsis thaliana HOM05D001976 ORTHO05D001960 2.2e-07 59.3 57 61.4
AL8G27330 Arabidopsis lyrata HOM05D001976 ORTHO05D001960 5.0e-07 58.2 57 61.4
Carub.0008s1303 Capsella rubella HOM05D001976 ORTHO05D001960 4.2e-06 55.1 69 53.6


User provided reference genes

Program Settings