Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-60 236.5 119 100.0
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 8.4e-50 200.3 100 100.0
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 8.4e-50 200.3 100 100.0
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 5.4e-49 197.6 100 98.0
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 7.9e-48 193.7 100 97.0
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 3.3e-46 188.3 100 94.0
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 1.5e-43 179.5 100 90.0
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 4.9e-42 174.5 100 89.0
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 4.8e-37 157.9 100 80.0
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 6.2e-37 157.5 102 79.4
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.4e-36 156.4 102 77.5
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 2.4e-36 155.6 101 78.2
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 7.6e-35 150.6 94 80.9
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 3.8e-34 148.3 92 80.4
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 2.7e-32 142.1 99 70.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 6.0e-32 141.0 95 70.5
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 7.9e-32 140.6 100 69.0
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 3.0e-31 138.7 78 89.7
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 6.7e-31 137.5 100 66.0
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 6.7e-31 137.5 92 71.7
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 2.5e-30 135.6 92 72.8
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 3.3e-30 135.2 94 69.1
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 3.3e-30 135.2 92 71.7
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 4.3e-30 134.8 93 72.0
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 4.3e-30 134.8 92 73.9
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 4.3e-30 134.8 99 65.7
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.3e-29 133.3 92 70.7
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 2.8e-29 132.1 89 69.7
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 2.8e-29 132.1 89 69.7
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 3.7e-29 131.7 92 69.6
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 4.8e-29 131.3 92 67.4
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 6.2e-29 131.0 92 66.3
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 6.2e-29 131.0 96 67.7
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.1e-28 130.2 92 68.5
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 1.8e-28 129.4 100 64.0
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.8e-28 129.4 91 68.1
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.8e-28 129.4 89 69.7
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 1.8e-28 129.4 92 70.7
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.4e-28 129.0 92 68.5
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 4.1e-28 128.3 96 64.6
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 5.3e-28 127.9 92 67.4
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 5.3e-28 127.9 92 67.4
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 9.0e-28 127.1 92 69.6
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 1.2e-27 126.7 92 69.6
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 1.2e-27 126.7 92 66.3
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 1.2e-27 126.7 92 66.3
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.5e-27 126.3 92 67.4
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 3.4e-27 125.2 91 65.9
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 5.8e-27 124.4 100 65.0
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 5.8e-27 124.4 100 65.0
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 5.8e-27 124.4 89 67.4
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 5.8e-27 124.4 92 67.4
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 5.8e-27 124.4 92 67.4
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 7.6e-27 124.0 100 62.0
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.0e-26 123.6 95 67.4
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 1.3e-26 123.2 92 67.4
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 2.2e-26 122.5 89 67.4
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 2.9e-26 122.1 92 67.4
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 2.9e-26 122.1 89 67.4
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 2.9e-26 122.1 92 67.4
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 3.8e-26 121.7 100 64.0
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 6.5e-26 120.9 92 65.2
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 6.5e-26 120.9 96 60.4
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 6.5e-26 120.9 92 66.3
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 6.5e-26 120.9 100 62.0
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 6.5e-26 120.9 100 61.0
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 8.4e-26 120.6 95 64.2
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 1.1e-25 120.2 92 67.4
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 1.1e-25 120.2 100 58.0
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.9e-25 119.4 100 58.0
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.9e-25 119.4 92 64.1
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.9e-25 119.4 92 64.1
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 1.9e-25 119.4 100 58.0
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 1.9e-25 119.4 95 65.3
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 1.9e-25 119.4 92 66.3
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 2.5e-25 119.0 93 64.5
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.5e-25 119.0 100 62.0
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 4.2e-25 118.2 92 64.1
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 5.5e-25 117.9 95 63.2
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 5.5e-25 117.9 100 62.0
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 1.2e-24 116.7 100 60.0
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.6e-24 116.3 94 63.8
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.7e-24 115.5 97 58.8
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 7.9e-24 114.0 92 63.0
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 7.9e-24 114.0 109 59.6
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.3e-23 113.2 88 62.5
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.0e-23 112.1 89 61.8
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 3.9e-23 111.7 97 59.8
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 5.1e-23 111.3 89 61.8
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 5.1e-23 111.3 95 60.0
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 8.7e-23 110.5 95 57.9
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 8.7e-23 110.5 102 56.9
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 1.1e-22 110.2 63 88.9
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 1.1e-22 110.2 109 58.7
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.1e-22 110.2 92 63.0
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 4.3e-22 108.2 63 87.3
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 4.3e-22 108.2 97 54.6
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 9.7e-22 107.1 93 61.3
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 6.3e-21 104.4 88 58.0
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 9.0e-20 100.5 76 61.8
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 2.2e-18 95.9 88 58.0
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 9.4e-17 90.5 89 56.2
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 2.1e-16 89.4 97 45.4
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 4.3e-14 81.6 92 43.5
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 9.7e-14 80.5 49 81.6
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 9.7e-14 80.5 49 81.6
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 2.4e-12 75.9 38 97.4
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 1.5e-11 73.2 63 57.1
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 2.6e-11 72.4 92 44.6
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 5.9e-11 71.2 38 92.1
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 5.9e-11 71.2 38 92.1
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 1.3e-10 70.1 106 44.3
A03p67130 Brassica napus HOM05D006363 ORTHO05D007920 1.3e-10 70.1 47 74.5
BraA01t02765Z Brassica rapa HOM05D006363 ORTHO05D007920 1.3e-10 70.1 47 74.5
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.4e-09 66.6 93 40.9


User provided reference genes

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