Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05980 Brassica carinata HOM05D008879 ORTHO05D010552 1.6e-36 155.6 80 100.0
BolC3t14429H Brassica oleracea HOM05D008879 ORTHO05D010552 1.6e-36 155.6 80 100.0
C03p20490 Brassica napus HOM05D008879 ORTHO05D010552 4.6e-36 154.1 80 98.8
A03p17370 Brassica napus HOM05D008879 ORTHO05D010552 1.5e-34 149.1 81 97.5
BraA03t11008Z Brassica rapa HOM05D008879 ORTHO05D010552 9.7e-34 146.4 81 96.3
Sp4g13570 Schrenkiella parvula HOM05D008879 ORTHO05D010552 1.7e-30 135.6 82 85.4
BcaB06g28488 Brassica carinata HOM05D008879 ORTHO05D010552 8.5e-30 133.3 82 86.6
C04p60330 Brassica napus HOM05D008879 ORTHO05D010552 8.5e-30 133.3 82 86.6
BolC4t27533H Brassica oleracea HOM05D008879 ORTHO05D010552 8.5e-30 133.3 82 86.6
BcaB01g04065 Brassica carinata HOM05D008879 ORTHO05D010552 1.1e-29 132.9 82 84.1
A05p14570 Brassica napus HOM05D008879 ORTHO05D010552 3.2e-29 131.3 81 82.7
A04p23850 Brassica napus HOM05D008879 ORTHO05D010552 5.5e-29 130.6 82 84.1
BraA04t17908Z Brassica rapa HOM05D008879 ORTHO05D010552 5.5e-29 130.6 82 84.1
Thhalv10017588m.g Eutrema salsugineum HOM05D008879 ORTHO05D010552 7.2e-29 130.2 82 81.7
Carub.0004s1234 Capsella rubella HOM05D008879 ORTHO05D010552 9.4e-29 129.8 82 84.1
BcaC02g11194 Brassica carinata HOM05D008879 ORTHO05D010552 2.7e-28 128.3 81 81.5
C04p19410 Brassica napus HOM05D008879 ORTHO05D010552 2.7e-28 128.3 81 81.5
BolC4t23473H Brassica oleracea HOM05D008879 ORTHO05D010552 2.7e-28 128.3 81 81.5
BcaB06g28411 Brassica carinata HOM05D008879 ORTHO05D010552 7.9e-28 126.7 82 80.5
AL4G26260 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 3.3e-26 121.3 82 79.3
AT2G31085 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 5.7e-26 120.6 82 78.0
CARHR124670 Cardamine hirsuta HOM05D008879 ORTHO05D010552 7.4e-26 120.2 81 77.8
Carub.0004s1233 Capsella rubella HOM05D008879 ORTHO05D010552 9.7e-26 119.8 81 76.5
AT2G31083 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 1.7e-25 119.0 82 78.0
BcaB02g10362 Brassica carinata HOM05D008879 ORTHO05D010552 3.7e-25 117.9 81 77.8
CARHR124660 Cardamine hirsuta HOM05D008879 ORTHO05D010552 3.7e-25 117.9 81 76.5
AL4G26270 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 4.8e-25 117.5 81 77.8
THA.LOC104826219 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.5e-18 95.9 82 65.9
THA.LOC104826220 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.5e-18 95.9 82 65.9
THA.LOC104815845 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 2.0e-18 95.5 82 61.0
Aa31LG5G5820 Aethionema arabicum HOM05D008879 ORTHO05D010552 3.7e-17 91.3 60 71.7
Ciclev10018336m.g Citrus clementina HOM05D008879 ORTHO05D010552 1.8e-11 72.4 77 55.8
Haze_13339 Corylus avellana HOM05D008879 ORTHO05D010552 2.6e-10 68.6 83 55.4
Cfa014710 Carpinus fangiana HOM05D008879 ORTHO05D010552 5.7e-10 67.4 83 54.2
Potri.001G376200 Populus trichocarpa HOM05D008879 ORTHO05D010552 3.1e-08 61.6 81 42.0
Potri.019G090800 Populus trichocarpa HOM05D008879 ORTHO05D010552 5.3e-08 60.8 77 49.4
TWI14G0991 Tripterygium wilfordii HOM05D008879 ORTHO05D010552 9.1e-08 60.1 80 47.5
Sabra13G0100400 Salix brachista HOM05D008879 ORTHO05D010552 1.2e-07 59.7 61 57.4
Sabra19G0104400 Salix brachista HOM05D008879 ORTHO05D010552 1.6e-07 59.3 77 49.4
COL.COLO4_17611 Corchorus olitorius HOM05D017499 ORTHO05D010552 3.5e-07 58.2 60 50.0
CSS0029563 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 1.0e-06 56.6 43 65.1
CSS0045732 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 1.0e-06 56.6 43 65.1
Lsat_1_v5_gn_7_23461 Lactuca sativa HOM05D012232 ORTHO05D010552 3.8e-06 54.7 70 40.0
Aqoxy4G00483 Aquilegia oxysepala HOM05D014579 ORTHO05D017365 8.5e-06 53.5 79 40.5


User provided reference genes

Program Settings