Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 2.1e-123 445.7 222 100.0
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 6.3e-83 311.2 215 78.1
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.3e-75 287.0 208 73.1
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 7.7e-73 277.7 155 92.3
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 1.4e-61 240.4 168 78.0
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 1.2e-60 237.3 168 75.6
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 1.2e-60 237.3 168 76.8
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 2.8e-59 232.6 168 76.2
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 6.3e-59 231.5 168 76.2
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 1.4e-58 230.3 168 75.6
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 4.4e-52 208.8 168 67.9
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 4.4e-52 208.8 168 67.9
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 1.8e-50 203.4 191 57.6
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 7.0e-50 201.4 199 54.3
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 5.9e-49 198.4 199 52.8
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 5.6e-47 191.8 199 52.3
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 5.6e-47 191.8 211 49.3
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 1.2e-46 190.7 204 51.5
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 1.2e-46 190.7 204 52.0
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 1.4e-45 187.2 168 58.9
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.8e-45 186.8 169 59.8
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.8e-45 186.8 169 59.8
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 1.8e-45 186.8 169 59.8
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 2.3e-45 186.4 168 57.1
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.5e-44 183.7 168 58.3
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 2.0e-44 183.3 169 58.0
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 5.8e-44 181.8 168 58.9
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 3.7e-43 179.1 168 57.7
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 4.9e-43 178.7 168 56.0
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 4.9e-43 178.7 168 56.0
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 8.3e-43 177.9 168 54.8
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 8.3e-43 177.9 168 56.0
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.1e-42 177.6 168 56.0
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 1.1e-42 177.6 168 57.7
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.1e-42 177.6 182 53.3
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 3.2e-42 176.0 168 57.1
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 4.1e-42 175.6 168 55.4
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 5.4e-42 175.3 168 55.4
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 5.4e-42 175.3 168 56.0
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 1.2e-41 174.1 168 56.5
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 2.0e-41 173.3 200 48.5
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 2.7e-41 172.9 182 52.2
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 3.5e-41 172.6 168 53.6
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 3.5e-41 172.6 168 53.6
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 3.5e-41 172.6 168 54.2
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 4.6e-41 172.2 168 55.4
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 1.0e-40 171.0 168 52.4
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 1.0e-40 171.0 168 52.4
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.3e-40 170.6 145 66.9
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 1.3e-40 170.6 168 53.6
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.3e-40 170.6 169 53.3
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.7e-40 170.2 168 53.6
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 2.3e-40 169.9 167 53.9
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 5.0e-40 168.7 168 54.2
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 6.6e-40 168.3 168 52.4
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 1.1e-39 167.5 182 50.0
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 1.1e-39 167.5 168 52.4
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 1.1e-39 167.5 168 52.4
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.9e-39 166.8 182 53.3
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 1.9e-39 166.8 168 55.4
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 4.3e-39 165.6 168 53.0
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 5.6e-39 165.2 158 54.4
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 1.2e-38 164.1 250 41.6
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 1.2e-38 164.1 167 52.7
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 2.8e-38 162.9 188 48.9
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 3.6e-38 162.5 169 53.8
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 3.6e-38 162.5 168 52.4
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 3.6e-38 162.5 183 50.8
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 4.7e-38 162.2 169 53.3
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 8.1e-38 161.4 219 43.4
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 1.1e-37 161.0 213 43.2
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 1.1e-37 161.0 168 51.2
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 1.1e-37 161.0 169 53.3
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 4.0e-37 159.1 169 53.8
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 8.9e-37 157.9 169 52.1
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 8.9e-37 157.9 164 53.7
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 8.9e-37 157.9 213 42.3
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 1.5e-36 157.1 168 52.4
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 1.5e-36 157.1 168 52.4
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 2.0e-36 156.8 169 53.3
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 1.3e-35 154.1 169 53.3
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 2.2e-35 153.3 169 46.7
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 5.4e-34 148.7 170 50.6
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 7.1e-34 148.3 164 52.4
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 3.0e-32 142.9 169 46.2
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 3.3e-31 139.4 169 48.5
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 9.5e-31 137.9 169 46.2
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 3.1e-29 132.9 141 52.5
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 1.5e-28 130.6 145 49.7
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 1.1e-26 124.4 200 39.0
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 1.4e-26 124.0 119 54.6
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 2.1e-25 120.2 137 48.9
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 3.0e-24 116.3 120 50.0
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 5.1e-24 115.5 64 89.1
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 8.6e-24 114.8 200 39.5
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 1.9e-23 113.6 167 39.5
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 2.8e-22 109.8 167 35.9
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 8.9e-21 104.8 170 41.8
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 8.9e-21 104.8 195 36.4
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 2.6e-20 103.2 141 45.4
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 6.4e-19 98.6 143 44.1
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 1.2e-17 94.4 114 50.9
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 3.4e-12 76.3 147 33.3
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 7.6e-12 75.1 94 42.6
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 6.4e-11 72.0 92 46.7
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 4.2e-10 69.3 39 79.5
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 1.2e-09 67.8 51 60.8
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 2.1e-09 67.0 48 66.7


User provided reference genes

Program Settings