Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05953 Brassica carinata HOM05D004127 ORTHO05D005119 6.9e-107 390.6 188 100.0
Sp4g13890 Schrenkiella parvula HOM05D004127 ORTHO05D005119 6.1e-55 218.0 159 72.3
C04p61120 Brassica napus HOM05D004127 ORTHO05D005119 1.4e-54 216.9 159 72.3
BcaC02g07981 Brassica carinata HOM05D004127 ORTHO05D005119 3.0e-54 215.7 159 71.7
A04p24290 Brassica napus HOM05D004127 ORTHO05D005119 3.0e-54 215.7 159 71.7
BolC4t27597H Brassica oleracea HOM05D004127 ORTHO05D005119 3.0e-54 215.7 159 71.7
BraA04t17948Z Brassica rapa HOM05D004127 ORTHO05D005119 3.0e-54 215.7 159 71.7
Thhalv10016219m.g Eutrema salsugineum HOM05D004127 ORTHO05D005119 5.2e-54 214.9 159 71.1
BcaB06g28547 Brassica carinata HOM05D004127 ORTHO05D005119 1.2e-53 213.8 159 71.1
AT2G31400 Arabidopsis thaliana HOM05D004127 ORTHO05D005119 4.4e-53 211.8 161 70.8
BraA05t20351Z Brassica rapa HOM05D004127 ORTHO05D005119 5.7e-53 211.5 161 70.8
AL4G26650 Arabidopsis lyrata HOM05D004127 ORTHO05D005119 9.8e-53 210.7 161 70.2
A05p14200 Brassica napus HOM05D004127 ORTHO05D005119 2.2e-52 209.5 159 69.8
Carub.0004s1272 Capsella rubella HOM05D004127 ORTHO05D005119 2.2e-52 209.5 161 70.2
CARHR125030 Cardamine hirsuta HOM05D004127 ORTHO05D005119 2.9e-52 209.1 159 69.8
Thhalv10016252m.g Eutrema salsugineum HOM05D004127 ORTHO05D005119 4.9e-52 208.4 159 69.2
BcaB02g10389 Brassica carinata HOM05D004127 ORTHO05D005119 6.4e-52 208.0 161 68.9
C04p18930 Brassica napus HOM05D004127 ORTHO05D005119 8.3e-52 207.6 159 68.6
BolC4t23423H Brassica oleracea HOM05D004127 ORTHO05D005119 8.3e-52 207.6 159 68.6
BcaC02g11240 Brassica carinata HOM05D004127 ORTHO05D005119 2.0e-50 203.0 159 67.9
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 4.6e-50 201.8 156 69.2
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 4.6e-50 201.8 156 69.2
Thhalv10006755m.g Eutrema salsugineum HOM05D004127 ORTHO05D005119 3.6e-47 192.2 159 63.5
Aa31LG1G8250 Aethionema arabicum HOM05D004127 ORTHO05D005119 6.2e-47 191.4 159 62.9
Manes.05G014100 Manihot esculenta HOM05D004127 ORTHO05D005119 1.8e-46 189.9 159 64.2
Gohir.A12G123700 Gossypium hirsutum HOM05D004127 ORTHO05D005119 3.1e-46 189.1 159 62.3
Gohir.D12G127400 Gossypium hirsutum HOM05D004127 ORTHO05D005119 2.0e-45 186.4 159 62.9
Gorai.008G138300 Gossypium raimondii HOM05D004127 ORTHO05D005119 2.0e-45 186.4 159 62.9
PGR083G1839 Punica granatum HOM05D004127 ORTHO05D005119 2.0e-45 186.4 159 63.5
Eucgr.H00998 Eucalyptus grandis HOM05D004127 ORTHO05D005119 2.6e-45 186.0 159 61.6
THA.LOC104809612 Tarenaya hassleriana HOM05D004127 ORTHO05D005119 2.6e-45 186.0 161 59.6
GSVIVG01028141001 Vitis vinifera HOM05D004127 ORTHO05D005119 2.6e-45 186.0 163 60.1
CiPaw.07G119200 Carya illinoinensis HOM05D004127 ORTHO05D005119 7.5e-45 184.5 159 59.7
Potri.014G118500 Populus trichocarpa HOM05D004127 ORTHO05D005119 9.8e-45 184.1 157 63.1
Duzib138G0806 Durio zibethinus HOM05D004127 ORTHO05D005119 2.2e-44 183.0 159 61.6
COL.COLO4_23210 Corchorus olitorius HOM05D004127 ORTHO05D005119 3.7e-44 182.2 159 62.3
Thecc.01G315900 Theobroma cacao HOM05D004127 ORTHO05D005119 3.7e-44 182.2 159 61.0
TWI75G0020 Tripterygium wilfordii HOM05D004127 ORTHO05D005119 3.7e-44 182.2 159 61.0
PSO170G0800 Papaver somniferum HOM05D004127 ORTHO05D005119 8.3e-44 181.0 159 59.7
Sabra14G0088000 Salix brachista HOM05D004127 ORTHO05D005119 8.3e-44 181.0 157 61.8
Cfa005772 Carpinus fangiana HOM05D004127 ORTHO05D005119 1.1e-43 180.6 159 59.7
Sabra02G0162500 Salix brachista HOM05D004127 ORTHO05D005119 1.1e-43 180.6 157 60.5
Ciclev10018807m.g Citrus clementina HOM05D004127 ORTHO05D005119 1.4e-43 180.3 163 58.9
Nn4g25565 Nelumbo nucifera HOM05D004127 ORTHO05D005119 1.4e-43 180.3 159 59.7
Cc01_g21590 Coffea canephora HOM05D004127 ORTHO05D005119 1.9e-43 179.9 159 59.7
DCAR_012332 Daucus carota HOM05D004127 ORTHO05D005119 1.9e-43 179.9 159 59.7
Manes.01G229400 Manihot esculenta HOM05D004127 ORTHO05D005119 1.9e-43 179.9 159 59.7
Potri.002G193900 Populus trichocarpa HOM05D004127 ORTHO05D005119 2.4e-43 179.5 157 61.1
Nn3g21732 Nelumbo nucifera HOM05D004127 ORTHO05D005119 3.2e-43 179.1 159 58.5
Haze_05068 Corylus avellana HOM05D004127 ORTHO05D005119 4.1e-43 178.7 159 59.1
Gohir.A11G108300 Gossypium hirsutum HOM05D004127 ORTHO05D005119 4.1e-43 178.7 159 61.0
Gorai.007G121300 Gossypium raimondii HOM05D004127 ORTHO05D005119 4.1e-43 178.7 159 61.0
MBI18_g03637_MAGBIO Magnolia biondii HOM05D004127 ORTHO05D005119 4.1e-43 178.7 159 57.9
Oeu058159.1 Olea europaea HOM05D004127 ORTHO05D005119 4.1e-43 178.7 157 59.9
PSO357G0209 Papaver somniferum HOM05D004127 ORTHO05D005119 5.4e-43 178.3 159 59.1
THA.LOC104819204 Tarenaya hassleriana HOM05D004127 ORTHO05D005119 5.4e-43 178.3 159 59.7
Prupe.3G010400 Prunus persica HOM05D004127 ORTHO05D005119 7.0e-43 177.9 165 57.6
Dinv33130 Davidia involucrata HOM05D004127 ORTHO05D005119 9.2e-43 177.6 159 58.5
QL12p019388 Quercus lobata HOM05D004127 ORTHO05D005119 9.2e-43 177.6 159 58.5
TAR633G0666 Trochodendron aralioides HOM05D004127 ORTHO05D005119 2.0e-42 176.4 157 58.6
Atru.BG.78.p Acer truncatum HOM05D004127 ORTHO05D005119 2.7e-42 176.0 160 59.4
CANSAT25G0729 Cannabis sativa HOM05D004127 ORTHO05D005119 2.7e-42 176.0 159 57.2
MD09G1284400 Malus domestica HOM05D004127 ORTHO05D005119 2.7e-42 176.0 165 56.4
Peaxi162Scf00058g02410 Petunia axillaris HOM05D004127 ORTHO05D005119 3.5e-42 175.6 157 58.0
Actinidia25862 Actinidia chinensis HOM05D004127 ORTHO05D005119 6.0e-42 174.9 159 57.9
Gohir.D11G112800 Gossypium hirsutum HOM05D004127 ORTHO05D005119 6.0e-42 174.9 157 59.9
Nitab4.5_0000363g0190 Nicotiana tabacum HOM05D004127 ORTHO05D005119 7.8e-42 174.5 159 57.9
Nitab4.5_0007407g0040 Nicotiana tabacum HOM05D004127 ORTHO05D005119 7.8e-42 174.5 159 57.9
ATR0693G036 Amborella trichopoda HOM05D004127 ORTHO05D005119 1.0e-41 174.1 159 56.0
SalBow3G1425 Salvia bowleyana HOM05D004127 ORTHO05D005119 1.0e-41 174.1 157 58.6
MSTRG.18089 Avicennia marina HOM05D004127 ORTHO05D005119 1.7e-41 173.3 159 58.5
CsaV3_7G030080 Cucumis sativus L. HOM05D004127 ORTHO05D005119 1.7e-41 173.3 159 57.2
Migut.D00068 Erythranthe guttata HOM05D004127 ORTHO05D005119 2.3e-41 172.9 154 59.1
Actinidia17915 Actinidia chinensis HOM05D004127 ORTHO05D005119 5.0e-41 171.8 159 56.0
Sed0018206 Sechium edule HOM05D004127 ORTHO05D005119 5.0e-41 171.8 159 56.6
CAN.G1280.36 Capsicum annuum HOM05D004127 ORTHO05D005119 6.6e-41 171.4 162 55.6
ClCG09G004980 Citrullus lanatus HOM05D004127 ORTHO05D005119 6.6e-41 171.4 159 56.6
MELO3C015913.2 Cucumis melo HOM05D004127 ORTHO05D005119 6.6e-41 171.4 159 56.6
Solyc06g009520.3 Solanum lycopersicum HOM05D004127 ORTHO05D005119 6.6e-41 171.4 162 55.6
Sopen06g004180 Solanum pennellii HOM05D004127 ORTHO05D005119 6.6e-41 171.4 162 55.6
EL10As5g23557 Beta vulgaris HOM05D004127 ORTHO05D005119 8.6e-41 171.0 165 53.9
PGSC0003DMG402007298 Solanum tuberosum HOM05D004127 ORTHO05D005119 8.6e-41 171.0 162 55.6
vmacro02392 Vaccinium macrocarpon HOM05D004127 ORTHO05D005119 1.1e-40 170.6 159 55.3
Aqoxy2G02720 Aquilegia oxysepala HOM05D004127 ORTHO05D005119 1.5e-40 170.2 159 56.0
Rhsim13G0003800 Rhododendron simsii HOM05D004127 ORTHO05D005119 1.5e-40 170.2 159 55.3
CiPaw.08G088200 Carya illinoinensis HOM05D004127 ORTHO05D005119 1.9e-40 169.9 159 55.3
FAN26G0855 Fragaria x ananassa HOM05D004127 ORTHO05D005119 1.9e-40 169.9 159 57.2
FAN28G2982 Fragaria x ananassa HOM05D004127 ORTHO05D005119 1.9e-40 169.9 159 57.2
RcHm_v2.0_Chr3g0487361 Rosa chinensis HOM05D004127 ORTHO05D005119 1.9e-40 169.9 161 57.1
Ah.02g112420 Amaranthus hybridus HOM05D004127 ORTHO05D005119 2.5e-40 169.5 157 54.8
CDE02G4605 Ceratophyllum demersum HOM05D004127 ORTHO05D005119 3.3e-40 169.1 163 54.0
Lalb_Chr10g0092591 Lupinus albus HOM05D004127 ORTHO05D005119 3.3e-40 169.1 157 56.7
CSS0036979 Camellia sinensis var. sinensis HOM05D004127 ORTHO05D005119 4.3e-40 168.7 159 55.3
CSS0010117 Camellia sinensis var. sinensis HOM05D004127 ORTHO05D005119 5.6e-40 168.3 163 53.4
FvH4_1g27040 Fragaria vesca HOM05D004127 ORTHO05D005119 5.6e-40 168.3 159 56.6
Hund09649 Selenicereus undatus HOM05D004127 ORTHO05D005119 7.3e-40 167.9 163 52.8
FAN23G1564 Fragaria x ananassa HOM05D004127 ORTHO05D005119 9.5e-40 167.5 159 56.0
FAN19G1378 Fragaria x ananassa HOM05D004127 ORTHO05D005119 1.6e-39 166.8 159 56.0
Rhsim01G0292100 Rhododendron simsii HOM05D004127 ORTHO05D005119 1.6e-39 166.8 159 54.7
Lj1g0020612 Lotus japonicus HOM05D004127 ORTHO05D005119 2.8e-39 166.0 159 52.8
MSTRG.21699 Avicennia marina HOM05D004127 ORTHO05D005119 4.7e-39 165.2 154 57.1
TAR362G1073 Trochodendron aralioides HOM05D004127 ORTHO05D005119 4.7e-39 165.2 154 56.5
CDE08G0979 Ceratophyllum demersum HOM05D004127 ORTHO05D005119 6.2e-39 164.9 168 52.4
arahy.Tifrunner.gnm1.ann1.X62M7H Arachis hypogaea HOM05D004127 ORTHO05D005119 1.8e-38 163.3 159 53.5
Actinidia21391 Actinidia chinensis HOM05D004127 ORTHO05D005119 2.3e-38 162.9 147 57.1
arahy.Tifrunner.gnm1.ann1.1I1C4M Arachis hypogaea HOM05D004127 ORTHO05D005119 3.1e-38 162.5 159 52.8
Lj2C1208T0 Lonicera japonica HOM05D004127 ORTHO05D005119 3.1e-38 162.5 208 46.2
Lsat_1_v5_gn_9_4701 Lactuca sativa HOM05D004127 ORTHO05D005119 8.9e-38 161.0 155 56.1
ECA247G3842 Erigeron canadensis HOM05D004127 ORTHO05D005119 2.0e-37 159.8 159 54.7
HanXRQChr10g0285041 Helianthus annuus HOM05D004127 ORTHO05D005119 7.5e-37 157.9 159 53.5
VMungo1383G2579 Vigna mungo HOM05D004127 ORTHO05D005119 7.5e-37 157.9 157 51.6
Glyma.18G276500 Glycine max HOM05D004127 ORTHO05D005119 9.9e-37 157.5 157 51.0
vmacro15103 Vaccinium macrocarpon HOM05D004127 ORTHO05D005119 9.9e-37 157.5 159 52.8
AUR62011779 Chenopodium quinoa HOM05D004127 ORTHO05D005119 1.3e-36 157.1 156 54.5
AUR62024623 Chenopodium quinoa HOM05D004127 ORTHO05D005119 1.3e-36 157.1 154 55.8
Phvul.008G024400 Phaseolus vulgaris HOM05D004127 ORTHO05D005119 1.3e-36 157.1 157 51.0
Medtr7g017525 Medicago truncatula HOM05D004127 ORTHO05D005119 6.4e-36 154.8 157 50.3
Medtr7g017530 Medicago truncatula HOM05D004127 ORTHO05D005119 6.4e-36 154.8 157 50.3
Os12g0562300 Oryza sativa ssp. japonica HOM05D004127 ORTHO05D005119 1.4e-35 153.7 157 50.3
Psat0s287g0280 Pisum sativum HOM05D004127 ORTHO05D005119 1.9e-35 153.3 157 48.4
Glyma.08G254000 Glycine max HOM05D004127 ORTHO05D005119 4.1e-35 152.1 156 50.0
Ca_06960_v3 Cicer arietinum L. HOM05D004127 ORTHO05D005119 7.1e-35 151.4 157 50.3
TPR.G3276 Trifolium pratense HOM05D004127 ORTHO05D005119 7.1e-35 151.4 157 48.4
Zm00001eb028500 Zea mays HOM05D004127 ORTHO05D005119 7.8e-34 147.9 157 47.8
HPP92_017253 Vanilla planifolia HOM05D004127 ORTHO05D005119 5.6e-32 141.7 157 47.1
Medtr7g017570 Medicago truncatula HOM05D004127 ORTHO05D005119 9.5e-32 141.0 159 45.3
HPP92_017249 Vanilla planifolia HOM05D004127 ORTHO05D005119 1.2e-31 140.6 157 46.5
MD17G1277600 Malus domestica HOM05D004127 ORTHO05D005119 3.6e-31 139.0 160 45.6
AagrBONN_evm.TU.Sc2ySwM_117.2521 Anthoceros agrestis HOM05D004127 ORTHO05D005119 4.7e-31 138.7 162 46.9
Mapoly0036s0086 Marchantia polymorpha HOM05D004127 ORTHO05D005119 8.1e-31 137.9 162 48.1
Pp3c6_15900 Physcomitrium patens HOM05D004127 ORTHO05D005119 2.6e-29 132.9 163 43.6
A03p17580 Brassica napus HOM05D004127 ORTHO05D005119 3.0e-25 119.4 63 88.9
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 3.0e-25 119.4 63 88.9
SEGI_31801 Sequoiadendron giganteum HOM05D004127 ORTHO05D005119 4.4e-21 105.5 117 48.7
SMO365G0082 Selaginella moellendorffii HOM05D004127 ORTHO05D005119 3.8e-20 102.4 164 37.8
Actinidia20980 Actinidia chinensis HOM05D004127 ORTHO05D005119 1.4e-19 100.5 86 58.1
CBR_g9159 Chara braunii HOM05D004127 ORTHO05D005119 1.4e-19 100.5 159 38.4
Sc24g0004200 Simmondsia chinensis HOM05D004127 ORTHO05D005119 7.8e-18 94.7 89 52.8
Psat4g056960 Pisum sativum HOM05D004127 ORTHO05D005119 1.4e-11 73.9 90 40.0
Oeu048866.1 Olea europaea HOM05D004127 ORTHO05D005119 1.8e-09 67.0 55 58.2
SMO271G0164 Selaginella moellendorffii HOM05D004079 ORTHO05D005437 1.9e-08 63.5 162 25.3
Pp3c7_10060 Physcomitrium patens HOM05D004079 ORTHO05D005437 6.2e-07 58.5 92 34.8
PRCOL_00003068 Prasinoderma coloniale HOM05D004127 ORTHO05D005119 1.4e-06 57.4 152 25.0
CBR_g12023 Chara braunii HOM05D001779 ORTHO05D001753 2.4e-06 56.6 135 28.9
Mapoly0114s0020 Marchantia polymorpha HOM05D004079 ORTHO05D005437 2.4e-06 56.6 133 27.8
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.1e-06 56.2 49 53.1
TAR381G1508 Trochodendron aralioides HOM05D004127 ORTHO05D005119 3.1e-06 56.2 49 53.1
Rhsim13G0142000 Rhododendron simsii HOM05D002244 ORTHO05D002269 4.0e-06 55.8 105 33.3
SEGI_13247 Sequoiadendron giganteum HOM05D000238 ORTHO05D005437 6.9e-06 55.1 165 25.5


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