Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05897 Brassica carinata HOM05D009335 ORTHO05D012740 1.5e-24 117.1 55 100.0
C03p21300 Brassica napus HOM05D009335 ORTHO05D012740 1.5e-24 117.1 55 100.0
BolC3t14512H Brassica oleracea HOM05D009335 ORTHO05D012740 1.5e-24 117.1 55 100.0
A03p18250 Brassica napus HOM05D009335 ORTHO05D012740 7.5e-24 114.8 55 98.2
BraA03t11085Z Brassica rapa HOM05D009335 ORTHO05D012740 2.2e-23 113.2 55 96.4
BcaB01g03966 Brassica carinata HOM05D009335 ORTHO05D012740 3.3e-19 99.4 55 89.1
BcaB02g10490 Brassica carinata HOM05D009335 ORTHO05D012740 4.2e-19 99.0 60 78.3
BcaC02g11351 Brassica carinata HOM05D009335 ORTHO05D012740 1.2e-18 97.4 58 81.0
C04p16970 Brassica napus HOM05D009335 ORTHO05D012740 1.2e-18 97.4 58 81.0
A04p25230 Brassica napus HOM05D009335 ORTHO05D012740 5.7e-16 88.6 67 67.2
BcaC02g07893 Brassica carinata HOM05D009335 ORTHO05D012740 7.5e-16 88.2 67 67.2
BolC4t27702H Brassica oleracea HOM05D009335 ORTHO05D012740 7.5e-16 88.2 67 67.2
BraA04t18024Z Brassica rapa HOM05D009335 ORTHO05D012740 1.3e-15 87.4 67 65.7
AT2G32690 Arabidopsis thaliana HOM05D009335 ORTHO05D012740 4.5e-13 79.0 65 63.1
AL4G28130 Arabidopsis lyrata HOM05D009335 ORTHO05D012740 5.9e-13 78.6 65 63.1
CARHR126580 Cardamine hirsuta HOM05D009335 ORTHO05D012740 1.0e-12 77.8 65 61.5
Carub.0004s1405 Capsella rubella HOM05D009335 ORTHO05D012740 1.3e-12 77.4 72 58.3
THA.LOC104801041 Tarenaya hassleriana HOM05D009335 ORTHO05D012740 5.0e-12 75.5 60 63.3
Sp4g15030 Schrenkiella parvula HOM05D009335 ORTHO05D012740 1.9e-11 73.6 40 82.5
Aa31LG5G4340 Aethionema arabicum HOM05D009335 ORTHO05D012740 2.8e-10 69.7 58 58.6
CARHR004190 Cardamine hirsuta HOM05D009335 ORTHO05D015386 1.8e-09 67.0 60 58.3
A10p03230 Brassica napus HOM05D009335 ORTHO05D015386 1.5e-08 63.9 63 55.6
Sp1g03640 Schrenkiella parvula HOM05D009335 ORTHO05D015386 1.5e-08 63.9 47 59.6
SpUn0199_0010 Schrenkiella parvula HOM05D009335 ORTHO05D015386 1.5e-08 63.9 47 59.6
BcaB02g06901 Brassica carinata HOM05D009335 ORTHO05D015386 5.8e-08 62.0 63 57.1
BraA10t42597Z Brassica rapa HOM05D009335 ORTHO05D015386 7.5e-08 61.6 63 54.0
BcaC05g24439 Brassica carinata HOM05D009335 ORTHO05D015386 2.9e-07 59.7 64 54.7
C05p02980 Brassica napus HOM05D009335 ORTHO05D015386 2.9e-07 59.7 64 54.7
BolC5t29079H Brassica oleracea HOM05D009335 ORTHO05D015386 2.9e-07 59.7 64 54.7
AL1G14520 Arabidopsis lyrata HOM05D009335 ORTHO05D015386 7.0e-06 55.1 50 56.0


User provided reference genes

Program Settings