Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05890 Brassica carinata HOM05D007973 ORTHO05D011027 5.9e-161 570.9 299 100.0
BcaB01g03963 Brassica carinata HOM05D007973 ORTHO05D011027 7.6e-116 421.0 224 100.0
BcaB01g03962 Brassica carinata HOM05D007973 ORTHO05D011027 1.1e-109 400.6 224 94.6
BcaC01g05888 Brassica carinata HOM05D007973 ORTHO05D011027 3.6e-81 305.8 224 77.2
C03p21420 Brassica napus HOM05D007973 ORTHO05D011027 3.6e-81 305.8 224 77.2
BolC3t14525H Brassica oleracea HOM05D007973 ORTHO05D011027 3.6e-81 305.8 223 77.1
BcaC01g05892 Brassica carinata HOM05D007973 ORTHO05D011027 3.1e-69 266.2 139 98.6
Sp4g15210 Schrenkiella parvula HOM05D007973 ORTHO05D011027 3.3e-63 246.1 230 64.3
BcaC01g05891 Brassica carinata HOM05D007973 ORTHO05D090524 1.2e-44 184.5 92 100.0
Sp4g15420 Schrenkiella parvula HOM05D007973 ORTHO05D011027 1.5e-42 177.6 235 51.5
AL4G28320 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 1.1e-29 134.8 276 40.6
Carub.0004s1425 Capsella rubella HOM05D007973 ORTHO05D011027 1.5e-26 124.4 255 40.8
Thhalv10017685m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 2.3e-19 100.5 282 36.2
Thhalv10017705m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 2.6e-15 87.0 268 35.1
AL4G22500 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 2.9e-14 83.6 249 33.7
AL4G22510 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 2.9e-14 83.6 249 33.7
AL6G33790 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 2.9e-14 83.6 223 35.4
AT2G13640 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 1.1e-13 81.6 277 31.8
Carub.0004s1401 Capsella rubella HOM05D007973 ORTHO05D011363 2.4e-13 80.5 141 36.2
AT2G27780 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 3.2e-13 80.1 276 31.2
CARHR123860 Cardamine hirsuta HOM05D007973 ORTHO05D011363 1.2e-12 78.2 142 40.1
AT5G27310 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 3.5e-12 76.6 277 30.7
Sp4g14980 Schrenkiella parvula HOM05D007973 ORTHO05D011363 1.5e-10 71.2 156 35.3
CARHR126530 Cardamine hirsuta HOM05D007973 ORTHO05D011363 3.3e-10 70.1 272 28.7
BcaB02g10484 Brassica carinata HOM05D007973 ORTHO05D011363 2.1e-09 67.4 225 29.3
C04p17050 Brassica napus HOM05D007973 ORTHO05D011363 3.6e-09 66.6 226 29.6
BolC4t23258H Brassica oleracea HOM05D007973 ORTHO05D011363 3.6e-09 66.6 226 29.6
AT2G32820 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 1.4e-08 64.7 189 37.0
BcaB02g10456 Brassica carinata HOM05D007973 ORTHO05D011363 2.4e-08 63.9 210 31.0
C04p17440 Brassica napus HOM05D007973 ORTHO05D011363 3.1e-08 63.5 259 28.6
BcaC02g11344 Brassica carinata HOM05D007973 ORTHO05D011363 9.0e-08 62.0 127 33.1
BcaB02g10486 Brassica carinata HOM05D007973 ORTHO05D011363 1.5e-07 61.2 222 28.4
AT2G33300 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 4.4e-07 59.7 113 46.0
BraA05t20237Z Brassica rapa HOM05D007973 ORTHO05D011363 7.6e-07 58.9 219 26.9
THA.LOC104820138 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 7.6e-07 58.9 98 38.8
THA.LOC104820139 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 7.6e-07 58.9 98 38.8
A05p12970 Brassica napus HOM05D007973 ORTHO05D011363 9.9e-07 58.5 219 26.9
BolC4t23294H Brassica oleracea HOM05D007973 ORTHO05D011363 2.2e-06 57.4 223 28.7
Aa31LG6G8590 Aethionema arabicum HOM05D007973 ORTHO05D011363 2.9e-06 57.0 84 40.5
A05p13330 Brassica napus HOM05D007973 ORTHO05D011363 2.9e-06 57.0 216 25.9
BraA05t20272Z Brassica rapa HOM05D007973 ORTHO05D011363 2.9e-06 57.0 216 25.9
Sp4g14560 Schrenkiella parvula HOM05D007973 ORTHO05D011363 6.4e-06 55.8 69 42.0


User provided reference genes

Program Settings