Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05853 Brassica carinata HOM05D004832 ORTHO05D005821 9.3e-81 303.5 158 100.0
BolC1t04876H Brassica oleracea HOM05D004832 ORTHO05D005821 2.2e-74 282.3 154 94.8
A01p38670 Brassica napus HOM05D004832 ORTHO05D005821 2.9e-74 282.0 154 94.2
BraA01t03917Z Brassica rapa HOM05D004832 ORTHO05D005821 2.9e-74 282.0 154 94.2
C01p49120 Brassica napus HOM05D004832 ORTHO05D005821 6.5e-74 280.8 154 94.2
BcaC09g48497 Brassica carinata HOM05D004832 ORTHO05D005821 7.9e-72 273.9 154 92.2
C03p21760 Brassica napus HOM05D004832 ORTHO05D005821 3.9e-71 271.6 141 100.0
AL5G21320 Arabidopsis lyrata HOM05D004832 ORTHO05D005821 8.2e-61 237.3 158 75.3
Carub.0003s1502 Capsella rubella HOM05D004832 ORTHO05D005821 2.6e-59 232.3 155 76.8
AL3G27790 Arabidopsis lyrata HOM05D004832 ORTHO05D005821 3.5e-59 231.9 152 77.0
Carub.0008s1260 Capsella rubella HOM05D004832 ORTHO05D005821 5.9e-59 231.1 148 77.7
Sp7g07030 Schrenkiella parvula HOM05D004832 ORTHO05D005821 1.1e-57 226.9 150 77.3
AT3G15351 Arabidopsis thaliana HOM05D004832 ORTHO05D005821 2.1e-56 222.6 137 79.6
Thhalv10023724m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 3.6e-56 221.9 155 73.5
Aa31LG8G2560 Aethionema arabicum HOM05D004832 ORTHO05D005821 1.8e-55 219.5 142 76.8
BcaB07g33539 Brassica carinata HOM05D004832 ORTHO05D005821 1.8e-55 219.5 150 74.7
Thhalv10021656m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 1.8e-55 219.5 155 72.9
Thhalv10009904m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 5.7e-54 214.5 155 70.3
Thhalv10009807m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 1.3e-53 213.4 155 70.3
COL.COLO4_11958 Corchorus olitorius HOM05D004832 ORTHO05D005821 9.4e-49 197.2 150 63.3
Hund06868 Selenicereus undatus HOM05D004832 ORTHO05D005821 1.2e-48 196.8 149 63.1
arahy.Tifrunner.gnm1.ann1.YIL91U Arachis hypogaea HOM05D004832 ORTHO05D005821 2.1e-48 196.1 148 63.5
Phvul.010G055900 Phaseolus vulgaris HOM05D004832 ORTHO05D005821 2.7e-48 195.7 150 61.3
COL.COLO4_12459 Corchorus olitorius HOM05D004832 ORTHO05D005821 3.6e-48 195.3 150 62.7
Eucgr.D02506 Eucalyptus grandis HOM05D004832 ORTHO05D005821 3.6e-48 195.3 153 60.1
THA.LOC104813152 Tarenaya hassleriana HOM05D004832 ORTHO05D005821 4.7e-48 194.9 138 68.8
arahy.Tifrunner.gnm1.ann1.W023QS Arachis hypogaea HOM05D004832 ORTHO05D005821 6.1e-48 194.5 149 62.4
DCAR_029781 Daucus carota HOM05D004832 ORTHO05D005821 6.1e-48 194.5 149 61.7
ClCG05G000300 Citrullus lanatus HOM05D004832 ORTHO05D005821 1.0e-47 193.7 150 59.3
CiPaw.13G030400 Carya illinoinensis HOM05D004832 ORTHO05D005821 1.4e-47 193.4 150 60.7
arahy.Tifrunner.gnm1.ann1.32ME5N Arachis hypogaea HOM05D004832 ORTHO05D005821 1.8e-47 193.0 149 61.7
arahy.Tifrunner.gnm1.ann1.88IY7S Arachis hypogaea HOM05D004832 ORTHO05D005821 1.8e-47 193.0 149 61.7
arahy.Tifrunner.gnm1.ann1.A6AVFI Arachis hypogaea HOM05D004832 ORTHO05D005821 1.8e-47 193.0 149 61.7
Glyma.16G097600 Glycine max HOM05D004832 ORTHO05D005821 1.8e-47 193.0 150 60.0
FvH4_7g10630 Fragaria vesca HOM05D004832 ORTHO05D005821 2.3e-47 192.6 150 60.0
FAN01G1609 Fragaria x ananassa HOM05D004832 ORTHO05D005821 2.3e-47 192.6 150 60.0
FAN06G0284 Fragaria x ananassa HOM05D004832 ORTHO05D005821 2.3e-47 192.6 150 60.0
FAN06G1644 Fragaria x ananassa HOM05D004832 ORTHO05D005821 2.3e-47 192.6 150 60.0
RcHm_v2.0_Chr1g0348571 Rosa chinensis HOM05D004832 ORTHO05D005821 2.3e-47 192.6 150 60.0
BcaB04g20935 Brassica carinata HOM05D002732 ORTHO05D006371 4.0e-47 191.8 102 91.2
Potri.002G142000 Populus trichocarpa HOM05D004832 ORTHO05D005821 4.0e-47 191.8 152 61.8
Potri.002G142100 Populus trichocarpa HOM05D004832 ORTHO05D005821 4.0e-47 191.8 152 61.8
Sabra02G0110600 Salix brachista HOM05D004832 ORTHO05D005821 6.8e-47 191.0 152 61.2
Prupe.2G134800 Prunus persica HOM05D004832 ORTHO05D005821 8.8e-47 190.7 150 60.0
CsaV3_3G007460 Cucumis sativus L. HOM05D001289 ORTHO05D002298 1.2e-46 190.3 150 57.3
Sed0016485 Sechium edule HOM05D004832 ORTHO05D005821 1.5e-46 189.9 150 57.3
Manes.01G270800 Manihot esculenta HOM05D004832 ORTHO05D005821 2.0e-46 189.5 150 59.3
MELO3C005967.2 Cucumis melo HOM05D004832 ORTHO05D005821 3.4e-46 188.7 150 57.3
Lj3g0007809 Lotus japonicus HOM05D004832 ORTHO05D005821 3.4e-46 188.7 149 59.7
GSVIVG01018202001 Vitis vinifera HOM05D004832 ORTHO05D005821 3.4e-46 188.7 150 59.3
Lalb_Chr07g0195651 Lupinus albus HOM05D004832 ORTHO05D005821 4.4e-46 188.3 149 59.1
Sc08g0005120 Simmondsia chinensis HOM05D004832 ORTHO05D005821 5.7e-46 188.0 146 61.0
Thecc.01G386800 Theobroma cacao HOM05D004832 ORTHO05D005821 5.7e-46 188.0 150 58.7
TPR.G2894 Trifolium pratense HOM05D004832 ORTHO05D005821 1.3e-45 186.8 150 58.0
Medtr4g093680 Medicago truncatula HOM05D004832 ORTHO05D005821 1.7e-45 186.4 150 58.7
Ciclev10022588m.g Citrus clementina HOM05D004832 ORTHO05D005821 2.2e-45 186.0 149 60.4
Gohir.A11G077700 Gossypium hirsutum HOM05D004832 ORTHO05D005821 2.2e-45 186.0 150 58.0
Atru.chr5.207 Acer truncatum HOM05D004832 ORTHO05D005821 2.8e-45 185.7 150 58.7
Gorai.007G087800 Gossypium raimondii HOM05D004832 ORTHO05D005821 2.8e-45 185.7 150 58.0
Lsat_1_v5_gn_4_43780 Lactuca sativa HOM05D004832 ORTHO05D005821 4.8e-45 184.9 150 59.3
Gohir.D11G082100 Gossypium hirsutum HOM05D004832 ORTHO05D005821 6.3e-45 184.5 150 58.0
Lj9A562G31 Lonicera japonica HOM05D004832 ORTHO05D005821 6.3e-45 184.5 151 58.9
Aqoxy7G02831 Aquilegia oxysepala HOM05D004832 ORTHO05D005821 8.3e-45 184.1 149 57.7
ECA234G0521 Erigeron canadensis HOM05D004832 ORTHO05D005821 8.3e-45 184.1 150 59.3
MD07G1111400 Malus domestica HOM05D004832 ORTHO05D005821 8.3e-45 184.1 150 57.3
MD10G1232800 Malus domestica HOM05D004832 ORTHO05D005821 8.3e-45 184.1 150 57.3
Dinv43651 Davidia involucrata HOM05D004832 ORTHO05D005821 1.4e-44 183.3 150 56.7
CANSAT64G0775 Cannabis sativa HOM05D004832 ORTHO05D005821 1.8e-44 183.0 146 58.9
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 2.4e-44 182.6 139 63.3
CSS0038442 Camellia sinensis var. sinensis HOM05D004832 ORTHO05D005821 2.4e-44 182.6 150 56.7
Ca_18388_v3 Cicer arietinum L. HOM05D004832 ORTHO05D005821 2.4e-44 182.6 150 56.7
CAN.G899.18 Capsicum annuum HOM05D004832 ORTHO05D005821 3.1e-44 182.2 153 57.5
Duzib138G0601 Durio zibethinus HOM05D004832 ORTHO05D005821 3.1e-44 182.2 138 62.3
MBI04_g11708_MAGBIO Magnolia biondii HOM05D004832 ORTHO05D005821 3.1e-44 182.2 149 58.4
Nitab4.5_0001823g0010 Nicotiana tabacum HOM05D004832 ORTHO05D005821 3.1e-44 182.2 153 56.2
VMungo0331G1454 Vigna mungo HOM05D004832 ORTHO05D005821 4.1e-44 181.8 137 62.0
Solyc01g090720.3 Solanum lycopersicum HOM05D004832 ORTHO05D005821 7.0e-44 181.0 150 57.3
Cfa011129 Carpinus fangiana HOM05D004832 ORTHO05D005821 2.0e-43 179.5 150 56.7
FAN03G2909 Fragaria x ananassa HOM05D004832 ORTHO05D005821 2.0e-43 179.5 137 62.0
Nitab4.5_0000706g0140 Nicotiana tabacum HOM05D004832 ORTHO05D005821 2.0e-43 179.5 150 56.7
Peaxi162Scf00377g00611 Petunia axillaris HOM05D004832 ORTHO05D005821 2.0e-43 179.5 153 56.2
Psat2g165520 Pisum sativum HOM05D004832 ORTHO05D005821 2.0e-43 179.5 150 57.3
Ah.03g133100 Amaranthus hybridus HOM05D004832 ORTHO05D005821 2.7e-43 179.1 137 60.6
Lj5g0022701 Lotus japonicus HOM05D004832 ORTHO05D005821 5.9e-43 177.9 150 58.0
Oeu061515.1 Olea europaea HOM05D004832 ORTHO05D005821 5.9e-43 177.9 153 54.9
Thhalv10009921m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 7.7e-43 177.6 155 63.9
Migut.B01571 Erythranthe guttata HOM05D004832 ORTHO05D005821 1.0e-42 177.2 149 57.7
PSO063G5716 Papaver somniferum HOM05D004832 ORTHO05D005821 1.0e-42 177.2 148 56.1
Sopen01g036450 Solanum pennellii HOM05D004832 ORTHO05D005821 1.0e-42 177.2 150 55.3
vmacro00550 Vaccinium macrocarpon HOM05D004832 ORTHO05D005821 1.7e-42 176.4 176 50.6
Cc02_g24530 Coffea canephora HOM05D004832 ORTHO05D005821 2.2e-42 176.0 153 55.6
ATR0317G035 Amborella trichopoda HOM05D004832 ORTHO05D005821 2.9e-42 175.6 144 58.3
Hma1.2p1_0341F.1_g130370 Hydrangea macrophylla HOM05D004832 ORTHO05D005821 3.8e-42 175.3 153 55.6
SGA_v2.0_scaffold52G19196 Striga asiatica HOM05D004832 ORTHO05D005821 6.5e-42 174.5 153 55.6
SGA_v2.0_scaffold153G36948 Striga asiatica HOM05D004832 ORTHO05D005821 8.5e-42 174.1 153 55.6
MSTRG.17149 Avicennia marina HOM05D004832 ORTHO05D005821 1.1e-41 173.7 153 55.6
Glyma.07G109700 Glycine max HOM05D004832 ORTHO05D005821 1.5e-41 173.3 133 61.7
HanXRQChr05g0138431 Helianthus annuus HOM05D004832 ORTHO05D005821 2.5e-41 172.6 150 56.0
PSO017G2958 Papaver somniferum HOM05D004832 ORTHO05D005821 3.2e-41 172.2 148 54.7
Nn6g33924 Nelumbo nucifera HOM05D004832 ORTHO05D005821 4.2e-41 171.8 137 58.4
Rhsim07G0033000 Rhododendron simsii HOM05D004832 ORTHO05D005821 4.2e-41 171.8 187 47.6
HanXRQChr16g0519281 Helianthus annuus HOM05D004832 ORTHO05D005821 1.2e-40 170.2 150 54.7
AUR62024291 Chenopodium quinoa HOM05D004832 ORTHO05D005821 1.6e-40 169.9 131 61.1
HPP92_023799 Vanilla planifolia HOM05D004832 ORTHO05D005821 1.6e-40 169.9 149 53.0
Haze_02734 Corylus avellana HOM05D004832 ORTHO05D005821 3.6e-40 168.7 172 50.0
Zm00001eb272690 Zea mays HOM05D004832 ORTHO05D005821 4.7e-40 168.3 148 53.4
AUR62035275 Chenopodium quinoa HOM05D004832 ORTHO05D005821 1.0e-39 167.2 128 60.9
CDE06G2810 Ceratophyllum demersum HOM05D004832 ORTHO05D005821 3.0e-39 165.6 136 55.9
Glyma.02G101600 Glycine max HOM05D004832 ORTHO05D005821 4.0e-39 165.2 126 62.7
SEGI_17839 Sequoiadendron giganteum HOM05D004832 ORTHO05D005821 8.8e-39 164.1 148 54.7
Os07g0485600 Oryza sativa ssp. japonica HOM05D004832 ORTHO05D005821 7.5e-38 161.0 125 58.4
PGR119G1038 Punica granatum HOM05D004832 ORTHO05D005821 3.7e-37 158.7 150 52.7
Sp1g41650 Schrenkiella parvula HOM05D004832 ORTHO05D005821 3.1e-36 155.6 102 73.5
MBI03_g13774_MAGBIO Magnolia biondii HOM05D004832 ORTHO05D005821 4.3e-33 145.2 135 51.9
DCAR_022632 Daucus carota HOM05D004832 ORTHO05D005821 1.2e-32 143.7 102 66.7
arahy.Tifrunner.gnm1.ann1.W1G7Z9 Arachis hypogaea HOM05D004832 ORTHO05D005821 1.8e-31 139.8 101 65.3
TAR629G1420 Trochodendron aralioides HOM05D004832 ORTHO05D005821 1.2e-30 137.1 107 57.9
QL04p035586 Quercus lobata HOM05D004832 ORTHO05D005821 3.4e-30 135.6 151 47.0
CSS0042819 Camellia sinensis var. sinensis HOM05D004832 ORTHO05D005821 5.7e-30 134.8 102 60.8
QL04p020302 Quercus lobata HOM05D004832 ORTHO05D005821 1.8e-28 129.8 103 58.3
Psat5g158760 Pisum sativum HOM05D004832 ORTHO05D005821 7.0e-28 127.9 119 54.6
BcaC08g43270 Brassica carinata HOM05D004832 ORTHO05D005821 1.3e-26 123.6 96 65.6
C06p06180 Brassica napus HOM05D004832 ORTHO05D005821 1.3e-26 123.6 96 65.6
BolC6t35729H Brassica oleracea HOM05D004832 ORTHO05D005821 1.3e-26 123.6 96 65.6
Pp3c10_24560 Physcomitrium patens HOM05D004832 ORTHO05D005821 5.0e-26 121.7 148 43.9
Mapoly0002s0300 Marchantia polymorpha HOM05D004832 ORTHO05D005821 6.6e-26 121.3 149 40.3
QL04p046254 Quercus lobata HOM05D003594 ORTHO05D004268 6.6e-26 121.3 98 61.2
SEGI_40532 Sequoiadendron giganteum HOM05D004832 ORTHO05D005821 6.6e-26 121.3 108 56.5
SMO141G0160 Selaginella moellendorffii HOM05D004832 ORTHO05D005821 1.9e-25 119.8 142 43.0
Thhalv10002901m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 2.5e-25 119.4 146 50.7
QL04p046167 Quercus lobata HOM05D004832 ORTHO05D005821 2.5e-25 119.4 101 57.4
CARHR215320 Cardamine hirsuta HOM05D004832 ORTHO05D005821 3.3e-25 119.0 71 81.7
AagrBONN_evm.TU.Sc2ySwM_368.2344 Anthoceros agrestis HOM05D004832 ORTHO05D005821 9.5e-25 117.5 148 41.9
HPP92_023759 Vanilla planifolia HOM05D004832 ORTHO05D005821 1.2e-24 117.1 120 49.2
AUR62005450 Chenopodium quinoa HOM05D004832 ORTHO05D005821 5.8e-22 108.2 128 46.9
Thhalv10009561m.g Eutrema salsugineum HOM05D004832 ORTHO05D005821 9.8e-22 107.5 84 69.0
HanXRQChr13g0390291 Helianthus annuus HOM05D004832 ORTHO05D005821 2.2e-21 106.3 90 54.4
Atru.chr5.209 Acer truncatum HOM05D004832 ORTHO05D005821 7.8e-19 97.8 72 59.7
Psat6g056000 Pisum sativum HOM05D004832 ORTHO05D005821 3.9e-18 95.5 96 54.2
HPP92_023760 Vanilla planifolia HOM05D004832 ORTHO05D005821 3.9e-18 95.5 100 47.0
CARHR090340 Cardamine hirsuta HOM05D004832 ORTHO05D005821 6.6e-18 94.7 69 72.5
Glyma.03G117400 Glycine max HOM05D004832 ORTHO05D005821 1.6e-16 90.1 72 54.2
Potri.014G057550 Populus trichocarpa HOM05D004832 ORTHO05D005821 4.0e-15 85.5 137 40.1
EL10Ac6g13797 Beta vulgaris HOM05D004832 ORTHO05D005821 6.8e-15 84.7 69 62.3
Os06g0535333 Oryza sativa ssp. japonica HOM05D004832 ORTHO05D005821 1.6e-11 73.6 59 57.6
QL12p027350 Quercus lobata HOM05D004832 ORTHO05D005821 7.8e-11 71.2 52 53.8
arahy.Tifrunner.gnm1.ann1.T8JHIW Arachis hypogaea HOM05D004832 ORTHO05D005821 4.7e-08 62.0 52 55.8
Atru.chr5.565 Acer truncatum HOM05D004832 ORTHO05D005821 3.4e-06 55.8 45 57.8
Atru.chr5.584 Acer truncatum HOM05D004832 ORTHO05D005821 3.4e-06 55.8 45 57.8
Sabra14G0041800 Salix brachista HOM05D004832 ORTHO05D005821 9.9e-06 54.3 56 57.1


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