Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05787 Brassica carinata HOM05D002924 ORTHO05D003122 5.3e-60 234.2 120 100.0
BcaC01g05788 Brassica carinata HOM05D002924 ORTHO05D003122 1.4e-49 199.5 100 100.0
C03p22400 Brassica napus HOM05D002924 ORTHO05D003122 1.4e-49 199.5 100 100.0
BolC3t14623H Brassica oleracea HOM05D002924 ORTHO05D003122 2.5e-49 198.7 100 99.0
BraA03t11175Z Brassica rapa HOM05D002924 ORTHO05D003122 6.3e-45 184.1 102 91.2
A03p19200 Brassica napus HOM05D002924 ORTHO05D003122 8.5e-42 173.7 103 88.3
BcaB01g06369 Brassica carinata HOM05D002924 ORTHO05D003122 1.1e-36 156.8 101 81.2
Sp4g16870 Schrenkiella parvula HOM05D002924 ORTHO05D003122 1.8e-28 129.4 115 69.6
BcaB06g28785 Brassica carinata HOM05D002924 ORTHO05D003122 5.3e-28 127.9 115 66.1
BolC4t27859H Brassica oleracea HOM05D002924 ORTHO05D003122 1.5e-25 119.8 115 64.3
A04p26500 Brassica napus HOM05D002924 ORTHO05D003122 7.2e-25 117.5 115 65.2
C04p63920 Brassica napus HOM05D002924 ORTHO05D003122 7.2e-25 117.5 115 65.2
BraA04t18154Z Brassica rapa HOM05D002924 ORTHO05D003122 4.7e-24 114.8 115 64.3
AT2G34600 Arabidopsis thaliana HOM05D002924 ORTHO05D003122 1.4e-23 113.2 125 57.6
AL270U10010 Arabidopsis lyrata HOM05D002924 ORTHO05D003122 2.6e-22 109.0 126 57.1
CARHR128700 Cardamine hirsuta HOM05D002924 ORTHO05D003122 3.3e-22 108.6 121 57.9
AL4G30580 Arabidopsis lyrata HOM05D002924 ORTHO05D003122 4.4e-22 108.2 126 57.1
Carub.0004s1628 Capsella rubella HOM05D002924 ORTHO05D003122 3.7e-21 105.1 124 54.0
BraA05t20050Z Brassica rapa HOM05D002924 ORTHO05D003122 4.8e-21 104.8 115 61.7
BcaB02g09523 Brassica carinata HOM05D002924 ORTHO05D003122 1.8e-20 102.8 115 58.3
BcaC02g11537 Brassica carinata HOM05D002924 ORTHO05D003122 1.8e-20 102.8 115 60.9
C04p14200 Brassica napus HOM05D002924 ORTHO05D003122 1.8e-20 102.8 115 60.9
BolC4t23009H Brassica oleracea HOM05D002924 ORTHO05D003122 1.8e-20 102.8 115 60.9
A05p11050 Brassica napus HOM05D002924 ORTHO05D003122 5.3e-20 101.3 115 60.0
Sp1g26000 Schrenkiella parvula HOM05D002924 ORTHO05D003122 6.1e-16 87.8 129 48.1
BcaC01g00158 Brassica carinata HOM05D002924 ORTHO05D003122 6.8e-15 84.3 125 44.8
A08p24680 Brassica napus HOM05D002924 ORTHO05D003122 6.8e-15 84.3 125 44.8
BolC3t19897H Brassica oleracea HOM05D002924 ORTHO05D003122 6.8e-15 84.3 125 44.8
BraA08t34423Z Brassica rapa HOM05D002924 ORTHO05D003122 6.8e-15 84.3 125 44.8
BcaB03g12198 Brassica carinata HOM05D002924 ORTHO05D003122 8.8e-15 84.0 126 45.2
AT1G30135 Arabidopsis thaliana HOM05D002924 ORTHO05D003122 3.4e-14 82.0 126 43.7
C03p76420 Brassica napus HOM05D002924 ORTHO05D003122 4.4e-14 81.6 125 45.6
BcaC01g00164 Brassica carinata HOM05D002924 ORTHO05D003122 1.7e-13 79.7 125 41.6
Carub.0001s2837 Capsella rubella HOM05D002924 ORTHO05D003122 2.2e-13 79.3 137 44.5
BcaC05g27039 Brassica carinata HOM05D002924 ORTHO05D003122 1.1e-12 77.0 124 41.1
C05p28990 Brassica napus HOM05D002924 ORTHO05D003122 1.1e-12 77.0 124 41.1
BolC5t31621H Brassica oleracea HOM05D002924 ORTHO05D003122 1.1e-12 77.0 124 41.1
AL1G44040 Arabidopsis lyrata HOM05D002924 ORTHO05D003122 4.1e-12 75.1 124 43.5
CARHR029250 Cardamine hirsuta HOM05D002924 ORTHO05D003122 1.2e-11 73.6 115 46.1
BcaB07g32615 Brassica carinata HOM05D002924 ORTHO05D003122 2.0e-11 72.8 125 41.6
BraA09t39160Z Brassica rapa HOM05D002924 ORTHO05D003122 2.3e-10 69.3 125 40.0
A09p36360 Brassica napus HOM05D002924 ORTHO05D003122 1.5e-09 66.6 125 39.2
C03p76460 Brassica napus HOM05D002924 ORTHO05D003122 1.2e-08 63.5 75 50.7
BcaB04g17519 Brassica carinata HOM05D002924 ORTHO05D003122 1.0e-07 60.5 63 61.9
Thhalv10009598m.g Eutrema salsugineum HOM05D002924 ORTHO05D003122 1.0e-07 60.5 130 40.0
Gohir.A10G041900 Gossypium hirsutum HOM05D002924 ORTHO05D003122 6.8e-07 57.8 119 39.5
Gorai.011G045300 Gossypium raimondii HOM05D002924 ORTHO05D003122 2.0e-06 56.2 119 39.5
Gohir.D10G042800 Gossypium hirsutum HOM05D002924 ORTHO05D003122 2.6e-06 55.8 119 39.5
Nitab4.5_0001531g0020 Nicotiana tabacum HOM05D002924 ORTHO05D003122 4.4e-06 55.1 117 38.5
Duzib235G1474 Durio zibethinus HOM05D002924 ORTHO05D003122 5.7e-06 54.7 123 38.2
Actinidia07706 Actinidia chinensis HOM05D002924 ORTHO05D003122 9.8e-06 53.9 119 37.0
Actinidia39583 Actinidia chinensis HOM05D002924 ORTHO05D003122 9.8e-06 53.9 122 36.9


User provided reference genes

Program Settings