Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05122 Brassica carinata HOM05D003683 ORTHO05D004143 3.2e-44 181.4 93 100.0
BcaC01g05135 Brassica carinata HOM05D003683 ORTHO05D004143 3.2e-44 181.4 93 100.0
C03p30100 Brassica napus HOM05D003683 ORTHO05D004143 7.0e-44 180.3 93 98.9
BcaB01g03267 Brassica carinata HOM05D003683 ORTHO05D004143 1.1e-41 172.9 93 95.7
A03p25230 Brassica napus HOM05D003683 ORTHO05D004143 3.6e-40 167.9 93 95.7
A05p05480 Brassica napus HOM05D003683 ORTHO05D004143 4.1e-36 154.5 93 87.1
BraA05t19518Z Brassica rapa HOM05D003683 ORTHO05D004143 4.1e-36 154.5 93 87.1
BcaC02g12206 Brassica carinata HOM05D003683 ORTHO05D004143 9.2e-36 153.3 93 87.1
C04p06420 Brassica napus HOM05D003683 ORTHO05D004143 9.2e-36 153.3 93 87.1
BolC4t22265H Brassica oleracea HOM05D003683 ORTHO05D004143 9.2e-36 153.3 93 87.1
A04p33850 Brassica napus HOM05D003683 ORTHO05D004143 3.5e-35 151.4 93 83.9
BraA04t18845Z Brassica rapa HOM05D003683 ORTHO05D004143 3.5e-35 151.4 93 83.9
Sp4g27480 Schrenkiella parvula HOM05D003683 ORTHO05D004143 4.6e-35 151.0 93 86.0
CARHR140640 Cardamine hirsuta HOM05D003683 ORTHO05D004143 7.8e-35 150.2 93 86.0
BcaB02g08986 Brassica carinata HOM05D003683 ORTHO05D004143 1.0e-34 149.8 88 89.8
BcaC02g07091 Brassica carinata HOM05D003683 ORTHO05D004143 1.0e-34 149.8 93 82.8
C04p71580 Brassica napus HOM05D003683 ORTHO05D004143 1.0e-34 149.8 93 82.8
BolC4t28663H Brassica oleracea HOM05D003683 ORTHO05D004143 1.0e-34 149.8 93 82.8
Thhalv10001694m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 2.3e-34 148.7 93 84.9
BcaB02g08997 Brassica carinata HOM05D003683 ORTHO05D004143 3.0e-34 148.3 93 84.9
AL4G44620 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 6.6e-34 147.1 93 83.9
AT2G45450 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 6.2e-32 140.6 91 82.4
Carub.0004s2806 Capsella rubella HOM05D003683 ORTHO05D004143 8.1e-32 140.2 94 80.9
BcaB06g29422 Brassica carinata HOM05D003683 ORTHO05D004143 1.1e-31 139.8 93 81.7
Aa31LG1G26950 Aethionema arabicum HOM05D003683 ORTHO05D004143 2.0e-22 109.0 101 64.4
CARHR171270 Cardamine hirsuta HOM05D003683 ORTHO05D004143 9.6e-17 90.1 89 57.3
Sp5g02360 Schrenkiella parvula HOM05D003683 ORTHO05D004143 9.6e-17 90.1 97 58.8
BcaB02g07396 Brassica carinata HOM05D003683 ORTHO05D004143 4.7e-16 87.8 96 58.3
AT3G60890 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 1.1e-15 86.7 97 56.7
A04p01350 Brassica napus HOM05D003683 ORTHO05D004143 1.4e-15 86.3 91 60.4
Thhalv10006309m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 1.4e-15 86.3 96 58.3
AL5G43210 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 4.0e-15 84.7 97 55.7
A07p25250 Brassica napus HOM05D003683 ORTHO05D004143 1.2e-14 83.2 96 53.1
BraA07t30167Z Brassica rapa HOM05D003683 ORTHO05D004143 1.2e-14 83.2 96 52.1
Carub.0005s2764 Capsella rubella HOM05D003683 ORTHO05D004143 1.2e-14 83.2 98 57.1
BcaC02g10196 Brassica carinata HOM05D003683 ORTHO05D004143 5.8e-14 80.9 91 57.1
C06p26960 Brassica napus HOM05D003683 ORTHO05D004143 2.2e-13 79.0 96 50.0
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 3.2e-12 75.1 103 46.6
BcaC08g45090 Brassica carinata HOM05D003683 ORTHO05D004143 4.2e-12 74.7 89 50.6
BolC6t37870H Brassica oleracea HOM05D003683 ORTHO05D004143 7.1e-12 73.9 98 49.0
C04p31700 Brassica napus HOM05D003683 ORTHO05D004143 9.3e-12 73.6 102 51.0
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 1.2e-11 73.2 96 50.0
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.2e-11 73.2 96 50.0
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.2e-11 73.2 96 50.0
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 1.2e-11 73.2 96 52.1
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 6.0e-11 70.9 101 47.5
FAN10G4272 Fragaria x ananassa HOM05D003683 ORTHO05D004143 6.0e-11 70.9 96 49.0
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 7.8e-11 70.5 95 49.5
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 1.3e-10 69.7 75 56.0
THA.LOC104801993 Tarenaya hassleriana HOM05D003683 ORTHO05D004143 1.7e-10 69.3 96 47.9
TAR375G1063 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.7e-10 69.3 97 46.4
GSVIVG01019925001 Vitis vinifera HOM05D003683 ORTHO05D004143 2.3e-10 68.9 87 49.4
ClCG05G002130 Citrullus lanatus HOM05D003683 ORTHO05D004143 3.9e-10 68.2 69 59.4
CAN.G630.45 Capsicum annuum HOM05D003683 ORTHO05D004143 5.1e-10 67.8 95 49.5
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 5.1e-10 67.8 96 44.8
FAN01G1734 Fragaria x ananassa HOM05D003683 ORTHO05D004143 6.6e-10 67.4 96 49.0
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 6.6e-10 67.4 74 54.1
CSS0019244 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 8.7e-10 67.0 91 47.3
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.1e-09 66.6 95 47.4
BolC4t24719H Brassica oleracea HOM05D003683 ORTHO05D004143 1.5e-09 66.2 47 76.6
BraA04t15855Z Brassica rapa HOM05D003683 ORTHO05D004143 1.5e-09 66.2 47 76.6
CsaV3_3G009560 Cucumis sativus L. HOM05D003683 ORTHO05D004143 1.5e-09 66.2 91 49.5
Gohir.A12G222400 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.5e-09 66.2 64 57.8
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 1.5e-09 66.2 73 54.8
BcaC08g45089 Brassica carinata HOM05D003683 ORTHO05D004143 1.9e-09 65.9 98 45.9
COL.COLO4_23839 Corchorus olitorius HOM05D003683 ORTHO05D004143 1.9e-09 65.9 61 62.3
Migut.E01009 Erythranthe guttata HOM05D003683 ORTHO05D004143 1.9e-09 65.9 90 52.2
PGSC0003DMG400003921 Solanum tuberosum HOM05D003683 ORTHO05D004143 1.9e-09 65.9 95 46.3
Thecc.03G264300 Theobroma cacao HOM05D003683 ORTHO05D004143 1.9e-09 65.9 61 63.9
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 2.5e-09 65.5 79 50.6
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 2.5e-09 65.5 102 44.1
Medtr7g075120 Medicago truncatula HOM05D003683 ORTHO05D004143 2.5e-09 65.5 89 46.1
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 3.3e-09 65.1 76 51.3
TAR629G0669 Trochodendron aralioides HOM05D003683 ORTHO05D004143 3.3e-09 65.1 92 46.7
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 4.3e-09 64.7 73 53.4
Gorai.008G241000 Gossypium raimondii HOM05D003683 ORTHO05D004143 4.3e-09 64.7 64 59.4
TAR629G3017 Trochodendron aralioides HOM05D003683 ORTHO05D004143 4.3e-09 64.7 92 46.7
Lsat_1_v5_gn_6_10220 Lactuca sativa HOM05D003683 ORTHO05D004143 7.3e-09 63.9 103 42.7
Peaxi162Scf00102g01336 Petunia axillaris HOM05D003683 ORTHO05D004143 7.3e-09 63.9 94 44.7
Potri.003G117200 Populus trichocarpa HOM05D003683 ORTHO05D004143 7.3e-09 63.9 47 70.2
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 9.6e-09 63.5 91 46.2
CiPaw.12G102800 Carya illinoinensis HOM05D003683 ORTHO05D004143 9.6e-09 63.5 61 54.1
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 9.6e-09 63.5 73 53.4
Manes.01G071300 Manihot esculenta HOM05D003683 ORTHO05D004143 9.6e-09 63.5 88 44.3
Lalb_Chr03g0039121 Lupinus albus HOM05D003683 ORTHO05D004143 1.3e-08 63.2 56 62.5
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 1.3e-08 63.2 68 55.9
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 1.3e-08 63.2 102 46.1
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 1.3e-08 63.2 68 54.4
DCAR_008565 Daucus carota HOM05D003683 ORTHO05D004143 1.6e-08 62.8 59 55.9
Glyma.03G022200 Glycine max HOM05D003683 ORTHO05D004143 1.6e-08 62.8 81 46.9
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 1.6e-08 62.8 109 39.4
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 2.1e-08 62.4 95 45.3
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 2.1e-08 62.4 82 50.0
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 2.1e-08 62.4 81 53.1
Sopen08g003530 Solanum pennellii HOM05D003683 ORTHO05D004143 2.1e-08 62.4 96 42.7
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 2.8e-08 62.0 93 44.1
Ciclev10023705m.g Citrus clementina HOM05D003683 ORTHO05D004143 2.8e-08 62.0 63 57.1
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 2.8e-08 62.0 89 46.1
Cc08_g13490 Coffea canephora HOM05D003683 ORTHO05D004143 4.8e-08 61.2 88 45.5
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 4.8e-08 61.2 76 48.7
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 4.8e-08 61.2 63 55.6
Oeu056803.1 Olea europaea HOM05D003683 ORTHO05D004143 4.8e-08 61.2 68 54.4
Atru.chr9.1472 Acer truncatum HOM05D003683 ORTHO05D004143 6.2e-08 60.8 65 55.4
Aqoxy7G00590 Aquilegia oxysepala HOM05D003683 ORTHO05D004143 6.2e-08 60.8 97 42.3
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 6.2e-08 60.8 92 45.7
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 6.2e-08 60.8 107 39.3
Phvul.010G085600 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 6.2e-08 60.8 100 44.0
Gohir.D03G159600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 8.1e-08 60.5 87 48.3
Gorai.003G167900 Gossypium raimondii HOM05D003683 ORTHO05D004143 8.1e-08 60.5 87 48.3
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 8.1e-08 60.5 93 44.1
Gohir.D12G224900 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.1e-07 60.1 64 56.2
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.4e-07 59.7 69 58.0
Actinidia14483 Actinidia chinensis HOM05D003683 ORTHO05D004143 1.8e-07 59.3 96 43.8
ECA233G3941 Erigeron canadensis HOM05D003683 ORTHO05D004143 1.8e-07 59.3 68 50.0
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 1.8e-07 59.3 74 48.6
Sabra01G0087900 Salix brachista HOM05D003683 ORTHO05D004143 1.8e-07 59.3 63 54.0
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 2.4e-07 58.9 79 45.6
Eucgr.E00491 Eucalyptus grandis HOM05D003683 ORTHO05D004143 2.4e-07 58.9 63 54.0
MSTRG.13795 Avicennia marina HOM05D003683 ORTHO05D004143 3.1e-07 58.5 88 45.5
MELO3C006178.2 Cucumis melo HOM05D003683 ORTHO05D004143 3.1e-07 58.5 92 47.8
HanXRQChr09g0246651 Helianthus annuus HOM05D003683 ORTHO05D004143 3.1e-07 58.5 95 42.1
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 3.1e-07 58.5 104 41.3
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 4.0e-07 58.2 72 47.2
MELO3C005596.2 Cucumis melo HOM05D003683 ORTHO05D004143 4.0e-07 58.2 60 53.3
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 4.0e-07 58.2 82 48.8
Nitab4.5_0006122g0030 Nicotiana tabacum HOM05D003683 ORTHO05D004143 4.0e-07 58.2 91 42.9
SalBow6G6235 Salvia bowleyana HOM05D003683 ORTHO05D004143 4.0e-07 58.2 74 52.7
Gohir.A12G102100 Gossypium hirsutum HOM05D003683 ORTHO05D004143 5.3e-07 57.8 96 43.8
PGSC0003DMG400012487 Solanum tuberosum HOM05D003683 ORTHO05D004143 5.3e-07 57.8 96 39.6
Gorai.008G114600 Gossypium raimondii HOM05D003683 ORTHO05D004143 6.9e-07 57.4 96 42.7
CiPaw.11G145300 Carya illinoinensis HOM05D003683 ORTHO05D004143 9.0e-07 57.0 55 54.5
QL12p015617 Quercus lobata HOM05D003683 ORTHO05D004143 9.0e-07 57.0 53 58.5
vmacro00217 Vaccinium macrocarpon HOM05D003683 ORTHO05D004143 9.0e-07 57.0 69 53.6
EL10Ac5g12652 Beta vulgaris HOM05D003683 ORTHO05D004143 1.2e-06 56.6 57 52.6
Phvul.008G075300 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 1.2e-06 56.6 103 41.7
PGR042G1830 Punica granatum HOM05D003683 ORTHO05D004143 1.2e-06 56.6 91 45.1
TWI60G0451 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 1.2e-06 56.6 61 52.5
VMungo1383G1500 Vigna mungo HOM05D003683 ORTHO05D004143 1.2e-06 56.6 103 41.7
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 1.2e-06 56.6 81 53.1
Cpa.g.sc29.63 Carica papaya HOM05D003683 ORTHO05D004143 1.5e-06 56.2 41 68.3
ClCG01G003480 Citrullus lanatus HOM05D003683 ORTHO05D004143 1.5e-06 56.2 61 49.2
HanXRQChr17g0557021 Helianthus annuus HOM05D003683 ORTHO05D004143 2.0e-06 55.8 94 40.4
Sed0004645 Sechium edule HOM05D003683 ORTHO05D004143 2.0e-06 55.8 97 39.2
MD02G1201500 Malus domestica HOM05D003683 ORTHO05D004143 2.6e-06 55.5 105 45.7
MD07G1124000 Malus domestica HOM05D003683 ORTHO05D004143 2.6e-06 55.5 103 45.6
Potri.001G114900 Populus trichocarpa HOM05D003683 ORTHO05D004143 3.4e-06 55.1 47 61.7
Sed0005281 Sechium edule HOM05D003683 ORTHO05D004143 3.4e-06 55.1 63 49.2
CsaV3_5G003580 Cucumis sativus L. HOM05D003683 ORTHO05D004143 4.4e-06 54.7 64 48.4
Sabra03G0081600 Salix brachista HOM05D003683 ORTHO05D004143 4.4e-06 54.7 63 50.8
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 7.6e-06 53.9 109 39.4
HanXRQChr16g0521651 Helianthus annuus HOM05D003683 ORTHO05D004143 7.6e-06 53.9 56 55.4
Hund11555 Selenicereus undatus HOM05D003683 ORTHO05D004143 7.6e-06 53.9 99 42.4
Hund14673 Selenicereus undatus HOM05D003683 ORTHO05D004143 7.6e-06 53.9 92 43.5
TWI23G1078 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 9.9e-06 53.5 62 50.0


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