Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05048 Brassica carinata HOM05D000002 ORTHO05D000047 2.8e-60 235.0 108 100.0
Hma1.2p1_0084F.1_g043170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.1e-15 84.3 71 49.3
Eucgr.K02658 Eucalyptus grandis HOM05D000002 ORTHO05D000047 6.7e-14 80.9 71 45.1
Psat7g018840 Pisum sativum HOM05D000002 ORTHO05D000047 6.7e-14 80.9 68 50.0
Hma1.2p1_0362F.1_g136110 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-13 80.1 68 48.5
Hma1.2p1_1551F.1_g290130 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-13 80.1 68 48.5
Hma1.2p1_0896F.1_g233970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-13 79.3 71 47.9
Psat6g094800 Pisum sativum HOM05D000002 ORTHO05D000047 2.6e-13 79.0 67 49.3
Psat0s1953g0440 Pisum sativum HOM05D000002 ORTHO05D000047 5.7e-13 77.8 63 50.8
C08p03990 Brassica napus HOM05D000002 ORTHO05D000047 7.4e-13 77.4 86 43.0
Hma1.2p1_0042F.1_g025670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.4e-13 77.4 71 46.5
PSO210G6905 Papaver somniferum HOM05D000002 ORTHO05D000047 7.4e-13 77.4 72 48.6
Aa31LG10G11130 Aethionema arabicum HOM05D000002 ORTHO05D000047 1.3e-12 76.6 72 44.4
Psat4g202080 Pisum sativum HOM05D000002 ORTHO05D000047 2.2e-12 75.9 67 47.8
Hma1.2p1_0471F.1_g159500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-12 75.5 71 45.1
Psat2g083200 Pisum sativum HOM05D000002 ORTHO05D000047 2.8e-12 75.5 67 47.8
Psat6g149400 Pisum sativum HOM05D000002 ORTHO05D000047 2.8e-12 75.5 63 47.6
THA.LOC104821333 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 2.8e-12 75.5 69 40.6
Sp5g25877 Schrenkiella parvula HOM05D000002 ORTHO05D000047 4.8e-12 74.7 71 42.3
PSO111G0103 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-11 73.6 72 47.2
PSO173G0022 Papaver somniferum HOM05D000002 ORTHO05D000047 1.1e-11 73.6 72 47.2
Psat7g121120 Pisum sativum HOM05D000002 ORTHO05D000047 1.1e-11 73.6 67 44.8
Cpa.g.sc227.9 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-11 72.8 71 45.1
Hma1.2p1_0281F.1_g113160 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-11 72.8 63 47.6
Psat4g075880 Pisum sativum HOM05D000002 ORTHO05D000047 1.8e-11 72.8 58 51.7
THA.LOC104822774 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.8e-11 72.8 61 45.9
THA.LOC104804236 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 3.1e-11 72.0 79 35.4
THA.LOC104823078 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.1e-11 71.6 69 37.7
PSO423G0194 Papaver somniferum HOM05D000002 ORTHO05D000001 5.3e-11 71.2 72 45.8
PSO675G4399 Papaver somniferum HOM05D000002 ORTHO05D000047 7.0e-11 70.9 72 45.8
Psat3g110120 Pisum sativum HOM05D000002 ORTHO05D000047 7.0e-11 70.9 68 44.1
THA.LOC104798893 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.6e-10 69.7 69 36.2
Psat6g204680 Pisum sativum HOM05D000002 ORTHO05D000047 2.0e-10 69.3 71 40.8
PSO063G5787 Papaver somniferum HOM05D000002 ORTHO05D000047 2.6e-10 68.9 64 46.9
Psat6g106160 Pisum sativum HOM05D000002 ORTHO05D000047 2.6e-10 68.9 71 40.8
Psat0s997g0040 Pisum sativum HOM05D000002 ORTHO05D000047 5.9e-10 67.8 67 43.3
Psat5g245120 Pisum sativum HOM05D000002 ORTHO05D000047 5.9e-10 67.8 68 42.6
Sp5g18880 Schrenkiella parvula HOM05D000002 ORTHO05D000047 1.0e-09 67.0 62 41.9
PSO528G0137 Papaver somniferum HOM05D000002 ORTHO05D000001 2.2e-09 65.9 72 41.7
Cpa.g.sc1.255 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-09 65.5 71 39.4
C05p40570 Brassica napus HOM05D000002 ORTHO05D000047 1.1e-08 63.5 82 36.6
BolC5t32796H Brassica oleracea HOM05D000002 ORTHO05D000047 1.1e-08 63.5 82 36.6
PSO782G0932 Papaver somniferum HOM05D000002 ORTHO05D000047 2.5e-08 62.4 64 35.9
Thhalv10012212m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 3.2e-08 62.0 65 36.9
PSO210G5652 Papaver somniferum HOM05D000002 ORTHO05D000047 5.5e-08 61.2 72 38.9
THA.LOC104825437 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 5.5e-08 61.2 56 41.1
SHI00533 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 72 38.9
A04p12600 Brassica napus HOM05D000002 ORTHO05D000047 2.1e-07 59.3 63 39.7
PGR083G2621 Punica granatum HOM05D000002 ORTHO05D000001 2.1e-07 59.3 68 36.8
SHI22439 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-07 58.9 72 38.9
SHI32479 Sapria himalayana HOM05D000002 ORTHO05D000047 2.7e-07 58.9 72 37.5
Rhsim05G0165100 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.1e-07 57.8 65 36.9
SHI14320 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-07 57.4 72 37.5
Thhalv10029485m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 1.0e-06 57.0 68 36.8
Rhsim01G0108500 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.0e-06 57.0 65 36.9
SHI27562 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-06 57.0 72 37.5
EL10Ac6g13589 Beta vulgaris HOM05D000001 ORTHO05D000003 1.8e-06 56.2 71 33.8
Cpa.g.sc190.36 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-06 56.2 72 31.9
Sp3g25410 Schrenkiella parvula HOM05D021678 ORTHO05D000047 1.8e-06 56.2 56 35.7
CANSAT25G2485 Cannabis sativa HOM05D000002 ORTHO05D000047 2.3e-06 55.8 72 34.7
Psat3g034800 Pisum sativum HOM05D000002 ORTHO05D000047 2.3e-06 55.8 69 37.7
Solyc10g009595.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.3e-06 55.8 72 36.1
Solyc11g011275.1 Solanum lycopersicum HOM05D000002 ORTHO05D000047 2.3e-06 55.8 72 36.1
Sopen00g010600 Solanum pennellii HOM05D000002 ORTHO05D000047 2.3e-06 55.8 72 36.1
Sopen01g008150 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 72 36.1
Sopen01g048330 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 72 36.1
Sopen04g023020 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 72 36.1
Sopen04g031140 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 72 36.1
Hma1.2p1_1117F.1_g259070 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 55.5 65 35.4
Psat4g202720 Pisum sativum HOM05D000002 ORTHO05D000047 3.0e-06 55.5 55 41.8
Thhalv10009346m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 4.0e-06 55.1 65 33.8
Thhalv10023972m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 4.0e-06 55.1 71 32.4
Hma1.2p1_2420F.1_g321840 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.0e-06 55.1 69 33.3
PSO675G0323 Papaver somniferum HOM05D000002 ORTHO05D000001 4.0e-06 55.1 76 36.8
SHI10167 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 55.1 72 37.5
Sp3g26345 Schrenkiella parvula HOM05D000002 ORTHO05D000047 4.0e-06 55.1 57 42.1
AUR62010530 Chenopodium quinoa HOM05D000002 ORTHO05D000047 6.7e-06 54.3 71 36.6
AUR62022215 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.7e-06 54.3 71 35.2
PSO675G3051 Papaver somniferum HOM05D000002 ORTHO05D000047 6.7e-06 54.3 66 40.9
Psat5g221080 Pisum sativum HOM05D000002 ORTHO05D000047 6.7e-06 54.3 65 38.5
PGR031G1334 Punica granatum HOM05D000002 ORTHO05D000047 6.7e-06 54.3 64 35.9
SHI08373 Sapria himalayana HOM05D000002 ORTHO05D000047 6.7e-06 54.3 55 43.6
Thhalv10023116m.g Eutrema salsugineum HOM05D000002 ORTHO05D000047 8.8e-06 53.9 70 32.9
PGR004G2026 Punica granatum HOM05D000002 ORTHO05D000047 8.8e-06 53.9 68 36.8


User provided reference genes

Program Settings