Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05008 Brassica carinata HOM05D012652 ORTHO05D018584 8.1e-97 357.1 180 100.0
BcaC05g27722 Brassica carinata HOM05D012652 ORTHO05D018584 6.4e-94 347.4 180 96.7
C05p32080 Brassica napus HOM05D012652 ORTHO05D018584 8.4e-94 347.1 180 96.7
BolC5t31935H Brassica oleracea HOM05D012652 ORTHO05D018584 8.4e-94 347.1 180 96.7
A05p33480 Brassica napus HOM05D012652 ORTHO05D018584 3.0e-43 179.1 150 68.7
BraA01t02953Z Brassica rapa HOM05D012652 ORTHO05D018584 2.6e-42 176.0 150 67.3
C05p37030 Brassica napus HOM05D012652 ORTHO05D018584 1.9e-37 159.8 83 95.2
C08p37410 Brassica napus HOM05D012652 ORTHO05D018584 1.4e-32 143.7 74 97.3
BraA09t36832Z Brassica rapa HOM05D012652 ORTHO05D000065 6.1e-28 128.3 74 89.2
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-21 106.3 73 78.1
BcaC02g10521 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-20 103.6 73 75.3
C02p45780 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-20 103.6 73 76.7
BolC4t24339H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-20 103.6 73 75.3
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 71.2
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 71.2
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 71.2
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-20 102.1 73 76.7
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-20 102.1 73 76.7
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-20 102.1 73 76.7
BcaC03g15710 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-20 101.3 73 74.0
BolC2t09433H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-20 101.3 73 74.0
BolC4t27405H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-19 100.5 90 61.1
A10p11580 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-19 99.0 65 80.0
BolC1t03816H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-18 95.9 90 58.9
A09p29710 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-18 95.1 73 71.2
BraA09t38537Z Brassica rapa HOM05D000313 ORTHO05D000065 5.7e-18 95.1 73 71.2
BcaC06g36574 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-17 92.0 73 67.1
C07p02730 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-17 91.3 143 44.8
BolC6t36579H Brassica oleracea HOM05D012652 ORTHO05D000065 1.1e-16 90.9 49 91.8
BolC9t54482H Brassica oleracea HOM05D000313 ORTHO05D000065 7.0e-16 88.2 63 74.6
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-14 83.6 55 76.4
BcaC07g36843 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-13 79.0 48 83.3
C08p02170 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-13 79.0 48 83.3
BcaC01g02399 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-12 76.3 51 76.5
BcaB06g27070 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-12 74.7 67 56.7
C04p45130 Brassica napus HOM05D003292 ORTHO05D033686 8.0e-12 74.7 52 71.2
BolC2t07194H Brassica oleracea HOM05D003292 ORTHO05D033686 8.0e-12 74.7 52 71.2
BolC4t26093H Brassica oleracea HOM05D003292 ORTHO05D033686 8.0e-12 74.7 52 71.2
BcaC01g06199 Brassica carinata HOM05D016309 ORTHO05D021634 1.1e-11 74.3 63 63.5
A09p41280 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-11 74.3 89 47.2
BolC3t14219H Brassica oleracea HOM05D016309 ORTHO05D021634 1.1e-11 74.3 63 63.5
BcaC01g06195 Brassica carinata HOM05D016309 ORTHO05D021634 1.8e-11 73.6 63 63.5
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-11 73.6 70 55.7
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-11 73.2 64 57.8
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-11 73.2 68 55.9
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 2.3e-11 73.2 80 46.2
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-11 72.4 68 55.9
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-11 71.2 66 53.0
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-10 70.1 64 56.2
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-10 70.1 70 52.9
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-10 70.1 78 44.9
BolC8t48144H Brassica oleracea HOM05D012652 ORTHO05D000065 2.0e-10 70.1 54 74.1
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-10 67.8 70 52.9
C05p56930 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-09 67.4 64 54.7
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-09 67.0 64 51.6
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-09 67.0 64 51.6
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.7e-09 67.0 64 56.2
A05p34160 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-09 66.6 85 48.2
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-09 66.2 64 56.2
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-09 66.2 66 50.0
BcaB07g32742 Brassica carinata HOM05D000313 ORTHO05D027477 3.7e-09 65.9 66 57.6
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-09 65.9 66 48.5
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-09 65.1 64 50.0
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-09 65.1 67 53.7
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-09 64.7 64 51.6
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-09 64.7 64 51.6
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 8.3e-09 64.7 65 49.2
C03p18180 Brassica napus HOM05D016309 ORTHO05D021634 8.3e-09 64.7 56 62.5
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 8.3e-09 64.7 70 52.9
BcaB03g15206 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 64.3 64 51.6
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-08 64.3 70 51.4
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-08 64.3 64 51.6
BolC6t37553H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-08 64.3 69 47.8
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-08 63.9 67 53.7
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-08 63.5 64 50.0
C08p23390 Brassica napus HOM05D000313 ORTHO05D015528 1.9e-08 63.5 75 49.3
BolC5t29849H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-08 63.5 84 41.7
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 63.2 64 48.4
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 63.2 64 48.4
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-08 63.2 64 51.6
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-08 62.8 66 47.0
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-08 62.8 64 48.4
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.2e-08 62.8 66 53.0
BcaB05g24116 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-08 62.4 75 46.7
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 64 48.4
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 64 48.4
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 64 48.4
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 64 48.4
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 66 54.5
BraA01t04317Z Brassica rapa HOM05D000313 ORTHO05D000065 4.1e-08 62.4 64 48.4
C02p32630 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-08 62.0 39 79.5
C07p23090 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-08 62.0 39 79.5
C08p24710 Brassica napus HOM05D010481 ORTHO05D017627 5.4e-08 62.0 67 50.7
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 5.4e-08 62.0 64 48.4
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 5.4e-08 62.0 70 50.0
BcaB01g00816 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-08 61.6 63 55.6
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-08 61.6 70 51.4
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-08 61.6 64 48.4
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-08 61.6 81 42.0
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-08 61.2 70 48.6
BcaC07g39432 Brassica carinata HOM05D010481 ORTHO05D017627 9.2e-08 61.2 107 39.3
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-08 61.2 66 45.5
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-08 61.2 64 48.4
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 9.2e-08 61.2 64 46.9
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-08 61.2 64 48.4
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 9.2e-08 61.2 64 48.4
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.8 64 46.9
BcaC07g39367 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.8 70 51.4
BcaC08g45120 Brassica carinata HOM05D000313 ORTHO05D039164 1.2e-07 60.8 53 64.2
C03p91860 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.8 66 48.5
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.8 69 44.9
C09p17240 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.8 39 76.9
BolC2t10736H Brassica oleracea HOM05D010481 ORTHO05D017627 1.2e-07 60.8 71 47.9
BolC9t54626H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-07 60.8 39 76.9
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-07 60.8 64 48.4
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-07 60.5 64 48.4
A04p07460 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-07 60.5 70 47.1
A08p06180 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-07 60.5 70 47.1
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-07 60.5 63 55.6
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 64 48.4
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 66 47.0
C07p19990 Brassica napus HOM05D010481 ORTHO05D017627 2.0e-07 60.1 66 50.0
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-07 60.1 64 48.4
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-07 60.1 64 51.6
BolC7t42518H Brassica oleracea HOM05D010481 ORTHO05D017627 2.0e-07 60.1 66 50.0
BolC8t50085H Brassica oleracea HOM05D010481 ORTHO05D017627 2.0e-07 60.1 66 50.0
BraA07t30966Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-07 60.1 39 76.9
A08p07610 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-07 59.7 66 48.5
C06p23850 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-07 59.3 69 44.9
BolC7t42461H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-07 59.3 39 74.4
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-07 59.3 70 50.0
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-07 58.9 66 43.9
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-07 58.5 64 45.3
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-07 58.5 64 45.3
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 6.0e-07 58.5 63 49.2
BcaB04g18160 Brassica carinata HOM05D012652 ORTHO05D000065 7.8e-07 58.2 46 65.2
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-07 58.2 66 45.5
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 7.8e-07 58.2 66 45.5
BolC1t02301H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-07 58.2 82 37.8
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-07 58.2 64 45.3
C04p30210 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-06 57.8 40 72.5
BolC4t24553H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-06 57.8 40 72.5
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.4 68 44.1
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.4 64 45.3
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.6 71 40.8
BcaC06g34590 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.6 53 58.5
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.6 67 43.3
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
C03p72030 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 68 42.6
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
BraA08t32776Z Brassica rapa HOM05D000313 ORTHO05D000065 2.3e-06 56.6 69 44.9
BolC7t43682H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-06 56.2 74 40.5
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-06 55.8 69 43.5
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-06 55.8 73 41.1
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-06 55.1 74 40.5
BolC9t57786H Brassica oleracea HOM05D032470 ORTHO05D027477 6.6e-06 55.1 62 54.8
BcaC07g37331 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-06 54.7 76 43.4
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-06 54.7 70 40.0
C08p10590 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-06 54.7 64 43.8
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-06 54.7 70 40.0
BraA07t29672Z Brassica rapa HOM05D000313 ORTHO05D000065 8.6e-06 54.7 35 80.0
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 8.6e-06 54.7 73 41.1


User provided reference genes

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