Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 2.8e-174 615.1 302 100.0
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 2.3e-136 489.2 262 93.9
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 5.4e-93 345.1 222 78.8
BolC3t15496H Brassica oleracea HOM05D015892 ORTHO05D009842 3.0e-67 259.6 129 100.0
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 5.0e-67 258.8 322 46.9
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 2.5e-66 256.5 321 47.7
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 1.4e-48 197.6 179 59.2
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 7.4e-34 148.7 113 63.7
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 6.4e-30 135.6 143 49.0
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 1.5e-26 124.4 98 65.3
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 5.5e-21 105.9 271 29.9
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 1.2e-20 104.8 286 29.0
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 1.6e-17 94.4 191 30.9
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 3.7e-17 93.2 274 28.5
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 4.8e-17 92.8 268 28.0
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 3.1e-16 90.1 131 35.1
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 1.2e-15 88.2 124 37.1
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 3.8e-14 83.2 110 38.2
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 1.1e-13 81.6 127 37.8
BcaB01g02360 Brassica carinata HOM05D015892 ORTHO05D009842 1.4e-13 81.3 143 40.6
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.9e-13 80.9 127 37.8
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 1.9e-13 80.9 124 35.5
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 1.9e-13 80.9 255 27.8
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 1.6e-12 77.8 149 32.9
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 6.1e-12 75.9 126 33.3
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-11 74.7 126 33.3
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 1.3e-11 74.7 126 33.3
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 1.8e-11 74.3 86 44.2
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 3.0e-11 73.6 103 30.1
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 3.0e-11 73.6 126 31.7
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 3.9e-11 73.2 126 31.0
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 6.7e-11 72.4 126 31.7
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 6.7e-11 72.4 126 31.7
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 6.7e-11 72.4 126 31.0
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 8.7e-11 72.0 128 32.8
A04p08410 Brassica napus HOM05D000057 ORTHO05D009842 1.1e-10 71.6 127 38.6
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-10 71.6 88 40.9
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 1.5e-10 71.2 114 37.7
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 1.5e-10 71.2 126 31.7
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 1.9e-10 70.9 130 33.1
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 4.3e-10 69.7 126 31.7
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 5.7e-10 69.3 126 30.2
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 5.7e-10 69.3 126 31.7
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 5.7e-10 69.3 126 30.2
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 7.4e-10 68.9 126 29.4
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 7.4e-10 68.9 130 28.5
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 7.4e-10 68.9 130 28.5
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 1.3e-09 68.2 117 29.9
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 1.3e-09 68.2 120 31.7
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 2.2e-09 67.4 126 34.9
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 2.2e-09 67.4 129 31.0
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 2.8e-09 67.0 126 30.2
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 2.8e-09 67.0 81 34.6
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 2.8e-09 67.0 131 31.3
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 3.7e-09 66.6 130 27.7
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 4.8e-09 66.2 81 33.3
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 4.8e-09 66.2 83 32.5
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 4.8e-09 66.2 126 34.1
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 6.3e-09 65.9 126 27.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 8.2e-09 65.5 126 31.0
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 8.2e-09 65.5 126 27.8
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 1.1e-08 65.1 131 30.5
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-08 65.1 83 32.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 1.1e-08 65.1 126 31.0
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.4e-08 64.7 119 35.3
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 1.4e-08 64.7 126 30.2
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 1.4e-08 64.7 129 31.8
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 1.4e-08 64.7 126 28.6
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.8e-08 64.3 126 30.2
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.8e-08 64.3 126 30.2
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 2.4e-08 63.9 131 29.0
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 2.4e-08 63.9 81 33.3
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 2.4e-08 63.9 126 29.4
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 4.1e-08 63.2 131 29.0
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 4.1e-08 63.2 131 29.0
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 4.1e-08 63.2 126 30.2
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 5.3e-08 62.8 105 34.3
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 5.3e-08 62.8 126 33.3
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 9.0e-08 62.0 126 28.6
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 9.0e-08 62.0 129 30.2
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 1.2e-07 61.6 126 28.6
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 1.2e-07 61.6 131 29.8
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 1.2e-07 61.6 126 33.3
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 1.5e-07 61.2 63 39.7
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 2.0e-07 60.8 117 28.2
A01p27450 Brassica napus HOM05D015892 ORTHO05D009842 3.4e-07 60.1 62 53.2
C06p00820 Brassica napus HOM05D016637 ORTHO05D027571 3.4e-07 60.1 147 32.7
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 4.5e-07 59.7 115 30.4
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 4.5e-07 59.7 129 30.2
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 5.9e-07 59.3 126 28.6
BolC3t16967H Brassica oleracea HOM05D016637 ORTHO05D027571 5.9e-07 59.3 147 32.7
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 5.9e-07 59.3 85 30.6
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 1.7e-06 57.8 88 31.8
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-06 57.8 126 28.6
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 1.7e-06 57.8 128 28.9
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 2.2e-06 57.4 126 29.4
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 2.9e-06 57.0 118 28.0
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 2.9e-06 57.0 81 28.4
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 3.8e-06 56.6 222 23.9
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 3.8e-06 56.6 139 27.3
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 5.0e-06 56.2 87 34.5
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 5.0e-06 56.2 128 27.3
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 5.0e-06 56.2 129 30.2
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 6.5e-06 55.8 126 28.6
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 6.5e-06 55.8 107 29.9
BolC5t33636H Brassica oleracea HOM05D008838 ORTHO05D021837 6.5e-06 55.8 73 28.8
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 6.5e-06 55.8 107 29.9


User provided reference genes

Program Settings