Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04969 Brassica carinata HOM05D000675 ORTHO05D032797 1.9e-68 262.3 129 100.0
BolC3t15504H Brassica oleracea HOM05D000675 ORTHO05D032797 3.4e-65 251.5 146 88.4
C03p31610 Brassica napus HOM05D000675 ORTHO05D032797 3.8e-64 248.1 146 86.3
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 2.6e-20 102.4 75 65.3
BcaB04g17916 Brassica carinata HOM05D000353 ORTHO05D023971 6.6e-16 87.8 73 57.5
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 1.2e-14 83.6 73 53.4
C02p34250 Brassica napus HOM05D000353 ORTHO05D023971 4.0e-13 78.6 75 57.3
BcaC03g16593 Brassica carinata HOM05D000353 ORTHO05D027349 8.9e-13 77.4 74 50.0
C02p44150 Brassica napus HOM05D000353 ORTHO05D027349 8.9e-13 77.4 74 50.0
BcaC01g05054 Brassica carinata HOM05D001308 ORTHO05D001170 1.2e-12 77.0 91 44.0
BcaC07g39298 Brassica carinata HOM05D001308 ORTHO05D001170 1.2e-12 77.0 41 82.9
C03p30730 Brassica napus HOM05D001308 ORTHO05D001170 1.2e-12 77.0 91 44.0
BolC8t49944H Brassica oleracea HOM05D001308 ORTHO05D001170 1.5e-12 76.6 73 54.8
BcaB05g22296 Brassica carinata HOM05D000675 ORTHO05D023971 2.0e-12 76.3 50 70.0
BcaB08g35240 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-12 76.3 41 80.5
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 1.3e-11 73.6 76 52.6
BolC3t15422H Brassica oleracea HOM05D001308 ORTHO05D001170 1.7e-11 73.2 91 42.9
BcaB05g23597 Brassica carinata HOM05D001308 ORTHO05D001170 3.7e-11 72.0 39 76.9
BcaB08g35398 Brassica carinata HOM05D001308 ORTHO05D001170 3.7e-11 72.0 82 42.7
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 3.7e-11 72.0 76 50.0
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 3.7e-11 72.0 76 50.0
BcaB04g17918 Brassica carinata HOM05D001308 ORTHO05D001170 4.9e-11 71.6 96 38.5
BolC2t09443H Brassica oleracea HOM05D001308 ORTHO05D001170 3.2e-10 68.9 41 75.6
BcaB01g01481 Brassica carinata HOM05D001308 ORTHO05D001170 7.0e-10 67.8 96 34.4
BcaB01g01215 Brassica carinata HOM05D001308 ORTHO05D001170 1.6e-09 66.6 40 67.5
BcaB02g11403 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-09 66.2 70 47.1
BcaB07g32747 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-09 66.2 96 36.5
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 2.7e-09 65.9 73 47.9
BcaB07g33927 Brassica carinata HOM05D001308 ORTHO05D001170 2.7e-09 65.9 41 65.9
A02p27960 Brassica napus HOM05D000353 ORTHO05D027349 3.5e-09 65.5 74 47.3
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 3.5e-09 65.5 74 47.3
BcaB08g35404 Brassica carinata HOM05D001308 ORTHO05D001170 7.8e-09 64.3 41 65.9
BcaB01g01153 Brassica carinata HOM05D001308 ORTHO05D001170 1.0e-08 63.9 82 37.8
BcaB03g16135 Brassica carinata HOM05D001308 ORTHO05D001170 1.0e-08 63.9 42 66.7
BcaB06g27261 Brassica carinata HOM05D000471 ORTHO05D000199 1.0e-08 63.9 77 44.2
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 1.7e-08 63.2 58 46.6
BolC2t11041H Brassica oleracea HOM05D001308 ORTHO05D001170 2.3e-08 62.8 41 61.0
BcaB02g08687 Brassica carinata HOM05D001308 ORTHO05D001170 3.0e-08 62.4 41 56.1
BcaB02g10636 Brassica carinata HOM05D001308 ORTHO05D001170 3.0e-08 62.4 41 56.1
BolC8t48056H Brassica oleracea HOM05D001308 ORTHO05D001170 3.0e-08 62.4 76 36.8
BcaB08g35400 Brassica carinata HOM05D001308 ORTHO05D001170 3.9e-08 62.0 41 63.4
C02p49630 Brassica napus HOM05D001308 ORTHO05D001170 3.9e-08 62.0 97 32.0
BcaB01g01439 Brassica carinata HOM05D001308 ORTHO05D001170 5.0e-08 61.6 41 63.4
BcaB05g23870 Brassica carinata HOM05D001308 ORTHO05D001170 5.0e-08 61.6 41 63.4
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 6.6e-08 61.2 66 45.5
BcaB04g17924 Brassica carinata HOM05D001308 ORTHO05D001170 8.6e-08 60.8 96 35.4
BcaB06g26881 Brassica carinata HOM05D001308 ORTHO05D001170 8.6e-08 60.8 94 36.2
BcaB07g33269 Brassica carinata HOM05D001308 ORTHO05D001170 1.9e-07 59.7 38 68.4
BcaB07g33908 Brassica carinata HOM05D001308 ORTHO05D001170 1.9e-07 59.7 41 58.5
BcaB03g15234 Brassica carinata HOM05D001308 ORTHO05D001170 2.5e-07 59.3 49 53.1
BcaB05g21921 Brassica carinata HOM05D001308 ORTHO05D001170 2.5e-07 59.3 41 53.7
BcaC08g45827 Brassica carinata HOM05D001308 ORTHO05D001170 2.5e-07 59.3 41 56.1
BraA07t28795Z Brassica rapa HOM05D001308 ORTHO05D001170 3.3e-07 58.9 41 58.5
BcaB03g16058 Brassica carinata HOM05D001308 ORTHO05D001170 4.3e-07 58.5 41 58.5
BcaB07g33101 Brassica carinata HOM05D001308 ORTHO05D001170 4.3e-07 58.5 41 61.0
BcaC03g15535 Brassica carinata HOM05D001308 ORTHO05D001170 4.3e-07 58.5 41 56.1
BraA04t17294Z Brassica rapa HOM05D001308 ORTHO05D001170 4.3e-07 58.5 41 65.9
BcaC02g10530 Brassica carinata HOM05D001308 ORTHO05D001170 5.6e-07 58.2 76 35.5
BcaB07g32442 Brassica carinata HOM05D001308 ORTHO05D001170 7.3e-07 57.8 41 56.1
BcaC01g00317 Brassica carinata HOM05D001308 ORTHO05D001170 7.3e-07 57.8 41 56.1
BcaC03g16483 Brassica carinata HOM05D001308 ORTHO05D001170 7.3e-07 57.8 73 38.4
BolC2t07486H Brassica oleracea HOM05D001308 ORTHO05D001170 7.3e-07 57.8 41 56.1
BolC2t10334H Brassica oleracea HOM05D001308 ORTHO05D001170 7.3e-07 57.8 96 33.3
BolC4t23070H Brassica oleracea HOM05D001308 ORTHO05D001170 7.3e-07 57.8 41 56.1
BcaC08g45194 Brassica carinata HOM05D001308 ORTHO05D001170 9.5e-07 57.4 76 35.5
BcaNung05579 Brassica carinata HOM05D001308 ORTHO05D001170 1.2e-06 57.0 41 61.0
BolC6t37989H Brassica oleracea HOM05D001308 ORTHO05D001170 1.2e-06 57.0 77 36.4
BcaB03g16137 Brassica carinata HOM05D001308 ORTHO05D001170 1.6e-06 56.6 41 56.1
BolC7t40571H Brassica oleracea HOM05D001308 ORTHO05D001170 2.1e-06 56.2 41 51.2
BcaB02g11451 Brassica carinata HOM05D001308 ORTHO05D001170 2.8e-06 55.8 41 53.7
BcaB06g26192 Brassica carinata HOM05D001308 ORTHO05D001170 2.8e-06 55.8 41 53.7
BcaB08g36586 Brassica carinata HOM05D001308 ORTHO05D001170 2.8e-06 55.8 41 53.7
BraA04t16619Z Brassica rapa HOM05D001308 ORTHO05D001170 2.8e-06 55.8 41 61.0
BolC6t36099H Brassica oleracea HOM05D001308 ORTHO05D001170 3.6e-06 55.5 41 51.2
BcaB03g16180 Brassica carinata HOM05D001308 ORTHO05D001170 6.2e-06 54.7 41 56.1
BraA10t42945Z Brassica rapa HOM05D001308 ORTHO05D001170 6.2e-06 54.7 42 59.5
BcaC01g01744 Brassica carinata HOM05D001308 ORTHO05D001170 8.1e-06 54.3 41 51.2
A01p26900 Brassica napus HOM05D001308 ORTHO05D001170 8.1e-06 54.3 81 35.8


User provided reference genes

Program Settings