Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 4.7e-184 647.9 365 100.0
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 4.7e-184 647.9 365 100.0
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 7.0e-172 607.4 358 96.6
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 1.5e-169 599.7 364 94.2
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 5.5e-169 597.8 342 98.5
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 4.9e-149 531.6 314 96.2
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 1.4e-143 513.5 307 95.8
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 1.4e-132 476.9 278 93.9
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 1.4e-132 476.9 278 93.9
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 3.2e-132 475.7 290 94.8
BcaB08g34407 Brassica carinata HOM05D010239 ORTHO05D032921 1.0e-114 417.5 245 97.6
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 8.1e-112 407.9 213 99.1
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 1.6e-70 270.8 195 75.9
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 2.2e-69 266.9 195 75.4
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 3.7e-64 249.6 184 74.5
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 2.4e-63 246.9 269 57.6
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 4.7e-59 232.6 189 70.9
BcaB01g01520 Brassica carinata HOM05D010239 ORTHO05D090601 5.0e-53 212.6 215 62.8
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 3.0e-50 203.4 184 65.2
BolC9t58576H Brassica oleracea HOM05D010239 ORTHO05D106135 5.4e-47 192.6 125 98.4
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 1.6e-35 154.5 102 79.4
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 2.1e-19 100.9 161 42.2
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 3.6e-19 100.1 161 42.2
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.8e-18 97.8 174 42.0
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 9.9e-17 92.0 155 40.0
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 9.9e-17 92.0 155 40.0
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 9.9e-17 92.0 155 40.0
BcaB01g03011 Brassica carinata HOM05D010239 ORTHO05D095759 1.3e-16 91.7 86 62.8
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 4.9e-16 89.7 207 38.2
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.4e-15 88.2 161 38.5
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 1.9e-15 87.8 202 37.6
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.9e-15 87.8 175 40.0
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 1.9e-15 87.8 202 37.6
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 1.9e-15 87.8 175 40.0
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 3.2e-15 87.0 161 39.1
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 4.1e-15 86.7 101 48.5
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 4.1e-15 86.7 161 38.5
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 4.1e-15 86.7 181 37.0
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 7.1e-15 85.9 101 48.5
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 1.2e-14 85.1 99 47.5
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.1e-14 84.3 161 38.5
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 2.7e-14 84.0 99 47.5
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 6.0e-14 82.8 78 57.7
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 2.3e-13 80.9 160 39.4
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 3.0e-13 80.5 163 41.1
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 6.6e-13 79.3 99 44.4
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 8.6e-13 79.0 143 40.6
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.1e-12 78.6 101 45.5
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 1.5e-12 78.2 159 39.6
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 1.5e-12 78.2 159 39.6
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 5.6e-12 76.3 86 50.0
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 5.6e-12 76.3 167 38.3
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 9.6e-12 75.5 101 44.6
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 1.6e-11 74.7 88 48.9
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 1.8e-10 71.2 92 44.6
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 2.4e-10 70.9 113 43.4
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 6.8e-10 69.3 79 48.1
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 6.8e-10 69.3 87 51.7
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 1.5e-09 68.2 67 55.2
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 2.0e-09 67.8 130 41.5
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 2.6e-09 67.4 76 50.0
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 3.4e-09 67.0 136 36.8
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 3.4e-09 67.0 79 54.4
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 5.8e-09 66.2 134 39.6
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 9.9e-09 65.5 70 60.0
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 9.9e-09 65.5 130 38.5
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 9.9e-09 65.5 130 38.5
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 2.9e-08 63.9 136 38.2
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 3.8e-08 63.5 112 40.2
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 8.4e-08 62.4 124 39.5
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 9.3e-07 58.9 59 55.9
BolC5t33755H Brassica oleracea HOM05D010036 ORTHO05D018636 9.3e-07 58.9 107 42.1
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 6.0e-06 56.2 134 37.3
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 7.8e-06 55.8 120 40.0


User provided reference genes

Program Settings