Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 2.6e-59 231.9 121 100.0
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 1.2e-56 223.0 121 96.7
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 2.7e-56 221.9 121 95.9
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 3.5e-35 151.8 117 69.2
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 4.4e-30 134.8 118 63.6
BcaC03g16593 Brassica carinata HOM05D000353 ORTHO05D027349 6.8e-23 110.9 76 73.7
C02p44150 Brassica napus HOM05D000353 ORTHO05D027349 6.8e-23 110.9 76 73.7
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 1.1e-20 103.6 123 48.8
A02p27960 Brassica napus HOM05D000353 ORTHO05D027349 3.5e-19 98.6 76 68.4
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 4.6e-19 98.2 106 52.8
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 6.2e-16 87.8 116 44.8
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 5.2e-15 84.7 75 64.0
BraA08t32999Z Brassica rapa HOM05D000353 ORTHO05D033592 6.8e-15 84.3 75 64.0
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 4.4e-14 81.6 99 47.5
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 6.4e-13 77.8 117 37.6
BcaB04g17916 Brassica carinata HOM05D000353 ORTHO05D023971 8.3e-13 77.4 98 46.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-12 77.0 117 37.6
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 1.1e-12 77.0 114 37.7
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 1.4e-12 76.6 114 37.7
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 1.9e-12 76.3 114 37.7
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 2.4e-12 75.9 117 36.8
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 3.2e-12 75.5 117 35.9
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 3.2e-12 75.5 114 37.7
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 5.4e-12 74.7 114 36.0
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 5.4e-12 74.7 113 37.2
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 5.4e-12 74.7 114 36.0
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 7.1e-12 74.3 117 39.3
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 7.1e-12 74.3 117 38.5
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 7.1e-12 74.3 117 41.0
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 7.1e-12 74.3 117 39.3
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 9.2e-12 73.9 117 36.8
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 9.2e-12 73.9 114 36.8
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 9.2e-12 73.9 114 36.0
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 9.2e-12 73.9 114 36.8
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 2.1e-11 72.8 117 41.0
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 2.1e-11 72.8 117 36.8
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 2.7e-11 72.4 117 35.0
C07p28020 Brassica napus HOM05D044059 ORTHO05D042763 3.5e-11 72.0 59 64.4
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 4.6e-11 71.6 114 36.8
BcaC01g04969 Brassica carinata HOM05D000675 ORTHO05D032797 6.0e-11 71.2 76 52.6
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 6.0e-11 71.2 109 36.7
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 6.0e-11 71.2 117 35.9
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 6.0e-11 71.2 109 36.7
BolC3t15504H Brassica oleracea HOM05D000675 ORTHO05D032797 6.0e-11 71.2 76 52.6
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 6.0e-11 71.2 117 35.9
BolC7t43333H Brassica oleracea HOM05D044059 ORTHO05D042763 6.0e-11 71.2 59 64.4
C03p31610 Brassica napus HOM05D000675 ORTHO05D032797 1.3e-10 70.1 76 51.3
C07p26190 Brassica napus HOM05D000353 ORTHO05D098633 1.7e-10 69.7 77 54.5
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 2.3e-10 69.3 98 41.8
C02p34250 Brassica napus HOM05D000353 ORTHO05D023971 3.0e-10 68.9 100 42.0
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 3.9e-10 68.6 117 35.9
BcaB06g28039 Brassica carinata HOM05D000703 ORTHO05D000633 1.1e-09 67.0 114 39.5
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 2.5e-09 65.9 117 34.2
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 3.3e-09 65.5 119 39.5
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 5.6e-09 64.7 114 37.7
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 7.3e-09 64.3 108 38.9
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 7.3e-09 64.3 117 33.3
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 7.3e-09 64.3 117 33.3
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-08 63.2 109 37.6
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-08 63.2 118 39.0
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.8 118 38.1
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.8 118 38.1
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 2.1e-08 62.8 118 38.1
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 2.1e-08 62.8 118 38.1
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 2.8e-08 62.4 118 38.1
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 3.6e-08 62.0 107 36.4
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 3.6e-08 62.0 108 34.3
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 4.7e-08 61.6 117 36.8
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 6.2e-08 61.2 109 35.8
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 8.1e-08 60.8 118 37.3
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-07 60.5 109 37.6
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 1.1e-07 60.5 89 36.0
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-07 59.7 109 37.6
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-07 59.7 109 36.7
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 3.1e-07 58.9 117 34.2
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 3.1e-07 58.9 92 39.1
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 4.0e-07 58.5 93 38.7
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 4.0e-07 58.5 107 36.4
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 4.0e-07 58.5 109 34.9
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 4.0e-07 58.5 118 36.4
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 5.2e-07 58.2 117 35.0
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 5.2e-07 58.2 109 36.7
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 5.2e-07 58.2 109 36.7
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-07 58.2 118 36.4
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-07 58.2 118 36.4
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-07 58.2 118 36.4
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 5.2e-07 58.2 118 36.4
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 5.2e-07 58.2 118 36.4
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 5.2e-07 58.2 118 36.4
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 5.2e-07 58.2 118 36.4
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 6.8e-07 57.8 95 38.9
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 6.8e-07 57.8 109 37.6
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 6.8e-07 57.8 109 37.6
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 6.8e-07 57.8 118 36.4
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 6.8e-07 57.8 109 36.7
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 36.7
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 36.7
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 35.8
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 36.7
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 36.7
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 36.7
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 36.7
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 8.9e-07 57.4 109 35.8
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 8.9e-07 57.4 117 34.2
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 8.9e-07 57.4 118 36.4
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 8.9e-07 57.4 99 37.4
BcaB04g18446 Brassica carinata HOM05D000471 ORTHO05D013512 1.2e-06 57.0 123 37.4
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-06 57.0 117 35.0
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-06 57.0 109 35.8
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 1.2e-06 57.0 99 35.4
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-06 57.0 109 35.8
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-06 57.0 109 36.7
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 1.2e-06 57.0 92 38.0
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-06 57.0 109 35.8
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 1.5e-06 56.6 109 35.8
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 1.5e-06 56.6 109 35.8
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 1.5e-06 56.6 109 36.7
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 1.5e-06 56.6 118 35.6
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 2.0e-06 56.2 109 35.8
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 2.0e-06 56.2 86 31.4
BcaB07g32765 Brassica carinata HOM05D009214 ORTHO05D096011 2.0e-06 56.2 70 47.1
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 2.0e-06 56.2 96 37.5
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 2.0e-06 56.2 109 35.8
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-06 56.2 109 36.7
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 2.0e-06 56.2 109 36.7
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-06 55.8 107 37.4
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 36.7
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 2.6e-06 55.8 109 36.7
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 35.8
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 35.8
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 35.8
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 35.8
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 35.8
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 35.8
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-06 55.8 109 36.7
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-06 55.5 109 35.8
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 3.4e-06 55.5 96 37.5
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 4.4e-06 55.1 108 34.3
BcaB06g27261 Brassica carinata HOM05D000471 ORTHO05D000199 4.4e-06 55.1 72 45.8
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 4.4e-06 55.1 95 37.9
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 4.4e-06 55.1 109 34.9
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 4.4e-06 55.1 109 35.8
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 4.4e-06 55.1 109 36.7
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 4.4e-06 55.1 109 35.8
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-06 55.1 96 37.5
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-06 55.1 96 37.5
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-06 55.1 109 34.9
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 4.4e-06 55.1 109 35.8
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 4.4e-06 55.1 96 37.5
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 5.8e-06 54.7 109 36.7
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 5.8e-06 54.7 109 35.8
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 5.8e-06 54.7 109 35.8
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 7.6e-06 54.3 109 37.6
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 7.6e-06 54.3 109 35.8
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 7.6e-06 54.3 109 34.9
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 7.6e-06 54.3 109 35.8
BcaB02g10854 Brassica carinata HOM05D000797 ORTHO05D021638 9.9e-06 53.9 52 51.9
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 9.9e-06 53.9 109 34.9
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 9.9e-06 53.9 109 35.8
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 9.9e-06 53.9 96 37.5


User provided reference genes

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