Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04857 Brassica carinata HOM05D004634 ORTHO05D005502 2.2e-152 542.3 286 100.0
BolC3t15633H Brassica oleracea HOM05D004634 ORTHO05D005502 2.2e-152 542.3 286 100.0
C03p33070 Brassica napus HOM05D004634 ORTHO05D005502 1.1e-151 540.0 286 99.7
BcaB01g02957 Brassica carinata HOM05D004634 ORTHO05D005502 1.8e-143 512.7 287 95.1
A03p27430 Brassica napus HOM05D004634 ORTHO05D005502 3.6e-139 498.4 287 93.7
BraA03t11955Z Brassica rapa HOM05D004634 ORTHO05D005502 3.6e-139 498.4 287 93.7
Sp4g00110 Schrenkiella parvula HOM05D004634 ORTHO05D005502 2.6e-129 465.7 292 86.6
Carub.0004s0001 Capsella rubella HOM05D004634 ORTHO05D005502 5.0e-125 451.4 291 85.9
AL4G10040 Arabidopsis lyrata HOM05D004634 ORTHO05D005502 3.6e-123 445.3 291 84.5
AT2G20920 Arabidopsis thaliana HOM05D004634 ORTHO05D005502 8.0e-123 444.1 291 84.5
CARHR111820 Cardamine hirsuta HOM05D004634 ORTHO05D005502 9.8e-121 437.2 292 83.2
Thhalv10000275m.g Eutrema salsugineum HOM05D004634 ORTHO05D005502 1.6e-115 419.9 292 80.8
Aa31LG7G15710 Aethionema arabicum HOM05D004634 ORTHO05D005502 3.3e-100 369.0 260 80.4
Aa31LG6G16660 Aethionema arabicum HOM05D004634 ORTHO05D005502 7.3e-100 367.9 291 70.1
THA.LOC104804086 Tarenaya hassleriana HOM05D004634 ORTHO05D005502 4.4e-97 358.6 296 69.9
THA.LOC104824757 Tarenaya hassleriana HOM05D004634 ORTHO05D005502 2.5e-92 342.8 293 67.6
TWI31G0086 Tripterygium wilfordii HOM05D004634 ORTHO05D005502 7.6e-89 331.3 297 63.3
TWI79G0300 Tripterygium wilfordii HOM05D004634 ORTHO05D005502 6.4e-88 328.2 296 63.2
Phvul.007G018100 Phaseolus vulgaris HOM05D004634 ORTHO05D005502 1.9e-87 326.6 286 63.3
Ciclev10028955m.g Citrus clementina HOM05D004634 ORTHO05D005502 4.2e-87 325.5 296 64.2
VMungo0720G0537 Vigna mungo HOM05D004634 ORTHO05D005502 5.4e-87 325.1 285 62.8
Manes.11G097500 Manihot esculenta HOM05D004634 ORTHO05D005502 9.3e-87 324.3 297 64.0
Manes.04G071300 Manihot esculenta HOM05D004634 ORTHO05D005502 7.8e-86 321.2 296 63.5
Aqoxy6G02026 Aquilegia oxysepala HOM05D004634 ORTHO05D005502 2.3e-85 319.7 300 62.0
Cfa005282 Carpinus fangiana HOM05D004634 ORTHO05D005502 3.0e-85 319.3 256 70.3
Glyma.20G106600 Glycine max HOM05D004634 ORTHO05D005502 3.9e-85 318.9 286 63.6
TPR.G2419 Trifolium pratense HOM05D004634 ORTHO05D005502 3.9e-85 318.9 251 69.7
COL.COLO4_17371 Corchorus olitorius HOM05D004634 ORTHO05D005502 5.1e-85 318.5 292 65.1
Glyma.10G283100 Glycine max HOM05D004634 ORTHO05D005502 6.6e-85 318.2 288 62.5
Actinidia21473 Actinidia chinensis HOM05D004634 ORTHO05D005502 1.1e-84 317.4 295 61.4
FAN15G1522 Fragaria x ananassa HOM05D004634 ORTHO05D005502 1.1e-84 317.4 250 70.0
FAN20G2203 Fragaria x ananassa HOM05D004634 ORTHO05D005502 1.1e-84 317.4 291 63.9
FAN24G0083 Fragaria x ananassa HOM05D004634 ORTHO05D005502 1.1e-84 317.4 291 63.9
Peaxi162Scf00362g00529 Petunia axillaris HOM05D004634 ORTHO05D005502 1.1e-84 317.4 295 61.7
Cpa.g.sc20.107 Carica papaya HOM05D004634 ORTHO05D005502 1.5e-84 317.0 299 62.2
Psat6g232600 Pisum sativum HOM05D004634 ORTHO05D005502 1.9e-84 316.6 272 65.1
Sabra09G0106800 Salix brachista HOM05D004634 ORTHO05D005502 1.9e-84 316.6 295 64.1
FAN27G3200 Fragaria x ananassa HOM05D004634 ORTHO05D005502 2.5e-84 316.2 291 63.9
MD05G1124500 Malus domestica HOM05D004634 ORTHO05D005502 3.3e-84 315.8 292 62.3
QL11p051507 Quercus lobata HOM05D004634 ORTHO05D005502 3.3e-84 315.8 238 71.4
Sabra04G0119200 Salix brachista HOM05D004634 ORTHO05D005502 3.3e-84 315.8 299 63.5
ClCG02G012070 Citrullus lanatus HOM05D004634 ORTHO05D005502 4.3e-84 315.5 291 63.6
EL10Ac9g21345 Beta vulgaris HOM05D004634 ORTHO05D005502 9.6e-84 314.3 263 66.2
Duzib132G0372 Durio zibethinus HOM05D004634 ORTHO05D005502 1.3e-83 313.9 294 63.6
Hma1.2p1_0163F.1_g072640 Hydrangea macrophylla HOM05D004634 ORTHO05D005502 1.3e-83 313.9 292 62.0
Gorai.008G037300 Gossypium raimondii HOM05D004634 ORTHO05D005502 1.6e-83 313.5 295 63.4
AUR62010016 Chenopodium quinoa HOM05D004634 ORTHO05D005502 2.1e-83 313.2 252 68.7
Potri.004G177300 Populus trichocarpa HOM05D004634 ORTHO05D005502 2.1e-83 313.2 295 63.7
Potri.009G137600 Populus trichocarpa HOM05D004634 ORTHO05D005502 2.1e-83 313.2 295 63.1
Duzib052G0999 Durio zibethinus HOM05D004634 ORTHO05D005502 3.6e-83 312.4 295 62.4
Atru.chr5.3387 Acer truncatum HOM05D004634 ORTHO05D005502 4.8e-83 312.0 297 62.3
Ca_03299_v3 Cicer arietinum L. HOM05D004634 ORTHO05D005502 6.2e-83 311.6 294 62.9
Gohir.A12G036500 Gossypium hirsutum HOM05D004634 ORTHO05D005502 6.2e-83 311.6 295 63.1
Gohir.D12G036100 Gossypium hirsutum HOM05D004634 ORTHO05D005502 6.2e-83 311.6 295 63.1
MD10G1127300 Malus domestica HOM05D004634 ORTHO05D005502 6.2e-83 311.6 251 66.1
Ah.01g023190 Amaranthus hybridus HOM05D004634 ORTHO05D005502 1.8e-82 310.1 264 65.2
CiPaw.05G084700 Carya illinoinensis HOM05D004634 ORTHO05D005502 1.8e-82 310.1 294 62.6
MBI05_g00175_MAGBIO Magnolia biondii HOM05D004634 ORTHO05D005502 1.8e-82 310.1 248 67.7
AUR62013006 Chenopodium quinoa HOM05D004634 ORTHO05D005502 4.0e-82 308.9 245 69.4
Nitab4.5_0003698g0030 Nicotiana tabacum HOM05D004634 ORTHO05D005502 5.3e-82 308.5 296 59.8
RcHm_v2.0_Chr6g0278771 Rosa chinensis HOM05D004634 ORTHO05D005502 9.0e-82 307.8 250 68.0
CiPaw.06G120500 Carya illinoinensis HOM05D004634 ORTHO05D005502 1.2e-81 307.4 295 60.3
FvH4_2g15590 Fragaria vesca HOM05D004634 ORTHO05D005502 1.2e-81 307.4 306 60.8
SGA_v2.0_scaffold58G20350 Striga asiatica HOM05D004634 ORTHO05D005502 1.2e-81 307.4 241 68.5
Gohir.A01G170200 Gossypium hirsutum HOM05D004634 ORTHO05D005502 1.5e-81 307.0 295 62.4
Migut.B00062 Erythranthe guttata HOM05D004634 ORTHO05D005502 3.4e-81 305.8 245 70.2
PGR042G2401 Punica granatum HOM05D004634 ORTHO05D005502 7.6e-81 304.7 297 63.0
Sed0005362 Sechium edule HOM05D004634 ORTHO05D005502 7.6e-81 304.7 236 71.6
Sopen01g053790 Solanum pennellii HOM05D004634 ORTHO05D005502 7.6e-81 304.7 297 58.6
Lj5g0018549 Lotus japonicus HOM05D004634 ORTHO05D005502 1.3e-80 303.9 297 60.9
Gohir.D01G161300 Gossypium hirsutum HOM05D004634 ORTHO05D005502 1.7e-80 303.5 294 62.9
Gorai.002G199900 Gossypium raimondii HOM05D004634 ORTHO05D005502 1.7e-80 303.5 294 62.9
Sed0028226 Sechium edule HOM05D004634 ORTHO05D005502 1.7e-80 303.5 297 60.3
CSS0049403 Camellia sinensis var. sinensis HOM05D004634 ORTHO05D005502 2.2e-80 303.1 252 67.5
Dinv14123 Davidia involucrata HOM05D004634 ORTHO05D005502 3.8e-80 302.4 247 67.2
Medtr1g112860 Medicago truncatula HOM05D004634 ORTHO05D005502 3.8e-80 302.4 264 64.8
CANSAT25G1088 Cannabis sativa HOM05D004634 ORTHO05D005502 4.9e-80 302.0 233 70.8
Dinv41921 Davidia involucrata HOM05D004634 ORTHO05D005502 4.9e-80 302.0 300 60.0
arahy.Tifrunner.gnm1.ann1.X9NSEY Arachis hypogaea HOM05D004634 ORTHO05D005502 8.4e-80 301.2 310 59.0
CSS0014782 Camellia sinensis var. sinensis HOM05D004634 ORTHO05D005502 1.1e-79 300.8 243 68.7
Actinidia20523 Actinidia chinensis HOM05D004634 ORTHO05D005502 1.4e-79 300.4 250 65.6
arahy.Tifrunner.gnm1.ann1.1RV92X Arachis hypogaea HOM05D004634 ORTHO05D005502 1.9e-79 300.1 310 59.0
Lalb_Chr21g0307021 Lupinus albus HOM05D004634 ORTHO05D005502 1.9e-79 300.1 242 67.4
Hma1.2p1_0032F.1_g019265 Hydrangea macrophylla HOM05D004634 ORTHO05D005502 3.2e-79 299.3 310 60.0
Hund06448 Selenicereus undatus HOM05D004634 ORTHO05D005502 3.2e-79 299.3 257 65.0
CDE05G0405 Ceratophyllum demersum HOM05D004634 ORTHO05D005502 4.2e-79 298.9 295 57.6
Rhsim11G0193300 Rhododendron simsii HOM05D004634 ORTHO05D005502 5.4e-79 298.5 267 61.8
MSTRG.19978 Avicennia marina HOM05D004634 ORTHO05D005502 7.1e-79 298.1 338 55.6
vmacro17321 Vaccinium macrocarpon HOM05D004634 ORTHO05D005502 9.3e-79 297.7 248 65.7
ClCG02G003930 Citrullus lanatus HOM05D004634 ORTHO05D005502 2.1e-78 296.6 297 59.6
GSVIVG01023991001 Vitis vinifera HOM05D004634 ORTHO05D005502 7.9e-78 294.7 220 72.3
CDE05G2434 Ceratophyllum demersum HOM05D004634 ORTHO05D005502 1.7e-77 293.5 291 58.4
TAR381G1727 Trochodendron aralioides HOM05D004634 ORTHO05D005502 1.7e-77 293.5 282 60.6
Prupe.8G168200 Prunus persica HOM05D004634 ORTHO05D005502 2.3e-77 293.1 278 60.4
Rhsim05G0053200 Rhododendron simsii HOM05D004634 ORTHO05D005502 3.0e-77 292.7 298 57.7
Thecc.02G056100 Theobroma cacao HOM05D004634 ORTHO05D005502 3.0e-77 292.7 280 62.1
ECA246G0918 Erigeron canadensis HOM05D004634 ORTHO05D005502 3.9e-77 292.4 223 70.0
HanXRQChr17g0544171 Helianthus annuus HOM05D004634 ORTHO05D005502 5.1e-77 292.0 219 71.7
Nn5g30833 Nelumbo nucifera HOM05D004634 ORTHO05D005502 5.1e-77 292.0 297 58.6
Eucgr.G01787 Eucalyptus grandis HOM05D004634 ORTHO05D005502 1.1e-76 290.8 314 55.7
Zm00001eb003030 Zea mays HOM05D004634 ORTHO05D005502 7.4e-76 288.1 249 63.5
Migut.N01330 Erythranthe guttata HOM05D004634 ORTHO05D005502 1.3e-75 287.3 288 59.4
CAN.G588.96 Capsicum annuum HOM05D004634 ORTHO05D005502 2.1e-75 286.6 218 70.6
Cc09_g10260 Coffea canephora HOM05D004634 ORTHO05D005502 4.8e-75 285.4 215 72.1
Duzib248G1349 Durio zibethinus HOM05D004634 ORTHO05D005502 6.2e-75 285.0 275 62.2
Zm00001eb402730 Zea mays HOM05D004634 ORTHO05D005502 5.3e-74 282.0 238 64.7
Ah.01g008170 Amaranthus hybridus HOM05D004634 ORTHO05D005502 6.9e-74 281.6 264 61.0
Solyc01g111750.4 Solanum lycopersicum HOM05D004634 ORTHO05D005502 1.2e-73 280.8 287 56.4
PGSC0003DMG400018041 Solanum tuberosum HOM05D004634 ORTHO05D005502 7.6e-73 278.1 229 65.1
MELO3C013335.2 Cucumis melo HOM05D004634 ORTHO05D005502 1.7e-72 276.9 291 57.4
HPP92_001746 Vanilla planifolia HOM05D004634 ORTHO05D005502 3.8e-72 275.8 241 62.7
Lj9A400T59 Lonicera japonica HOM05D004634 ORTHO05D005502 6.4e-72 275.0 250 62.4
vmacro02287 Vaccinium macrocarpon HOM05D004634 ORTHO05D005502 1.9e-71 273.5 288 56.9
PSO210G1566 Papaver somniferum HOM05D004634 ORTHO05D005502 2.4e-71 273.1 288 57.6
unitig_744.g24280 Utricularia gibba HOM05D004634 ORTHO05D005502 7.1e-71 271.6 220 67.7
PSO170G0173 Papaver somniferum HOM05D004634 ORTHO05D005502 2.7e-70 269.6 228 64.9
MELO3C020831.2 Cucumis melo HOM05D004634 ORTHO05D005502 1.3e-69 267.3 273 60.4
DCAR_003183 Daucus carota HOM05D004634 ORTHO05D005502 5.1e-69 265.4 275 56.4
Lsat_1_v5_gn_3_47561 Lactuca sativa HOM05D004634 ORTHO05D005502 1.6e-67 260.4 225 65.8
Os03g0137300 Oryza sativa ssp. japonica HOM05D004634 ORTHO05D005502 3.7e-67 259.2 208 65.9
Oeu015555.1 Olea europaea HOM05D004634 ORTHO05D005502 1.1e-66 257.7 237 60.8
CsaV3_2G016230 Cucumis sativus L. HOM05D004634 ORTHO05D005502 2.6e-65 253.1 256 60.2
PSO541G4751 Papaver somniferum HOM05D004634 ORTHO05D005502 3.4e-65 252.7 232 60.3
ATR0661G512 Amborella trichopoda HOM05D004634 ORTHO05D005502 4.2e-63 245.7 257 57.2
Nn6g31925 Nelumbo nucifera HOM05D004634 ORTHO05D005502 2.1e-62 243.4 261 55.9
TAR376G0880 Trochodendron aralioides HOM05D004634 ORTHO05D005502 5.7e-60 235.3 253 56.9
Lj5A177T58 Lonicera japonica HOM05D004634 ORTHO05D005502 1.5e-57 227.3 175 72.0
PSO675G7052 Papaver somniferum HOM05D004634 ORTHO05D005502 1.5e-57 227.3 228 56.1
Sc18g0006360 Simmondsia chinensis HOM05D004634 ORTHO05D005502 3.8e-56 222.6 197 62.4
Haze_02111 Corylus avellana HOM05D004634 ORTHO05D005502 6.5e-56 221.9 162 73.5
AagrBONN_evm.TU.Sc2ySwM_344.2768 Anthoceros agrestis HOM05D004634 ORTHO05D005502 1.9e-55 220.3 233 53.2
Mapoly0158s0035 Marchantia polymorpha HOM05D004634 ORTHO05D005502 2.5e-55 219.9 245 51.4
TAR381G0316 Trochodendron aralioides HOM05D004634 ORTHO05D005502 9.3e-55 218.0 171 68.4
Pp3c10_20920 Physcomitrium patens HOM05D004634 ORTHO05D005502 1.0e-53 214.5 227 54.2
Pp3c20_20480 Physcomitrium patens HOM05D004634 ORTHO05D005502 7.4e-52 208.4 225 53.3
Lj9A397T37 Lonicera japonica HOM05D004634 ORTHO05D005502 1.7e-48 197.2 181 61.9
Actinidia32031 Actinidia chinensis HOM05D004634 ORTHO05D005502 2.0e-44 183.7 142 69.0
SMO356G0675 Selaginella moellendorffii HOM05D004634 ORTHO05D005502 4.4e-44 182.6 228 46.5
CBR_g40579 Chara braunii HOM05D004634 ORTHO05D000002 4.5e-41 172.6 239 42.7
Atru.chr5.3399 Acer truncatum HOM05D004634 ORTHO05D005502 3.2e-39 166.4 175 57.7
DCAR_003186 Daucus carota HOM05D004634 ORTHO05D005502 1.3e-35 154.5 113 68.1
ECA246G0196 Erigeron canadensis HOM05D004634 ORTHO05D005502 1.1e-34 151.4 125 66.4
Actinidia18044 Actinidia chinensis HOM05D004634 ORTHO05D005502 3.5e-33 146.4 157 55.4
Sed0025180 Sechium edule HOM05D004634 ORTHO05D005502 4.4e-28 129.4 124 60.5
Oeu029649.1 Olea europaea HOM05D004634 ORTHO05D005502 1.3e-27 127.9 117 58.1
Actinidia37338 Actinidia chinensis HOM05D004634 ORTHO05D005502 2.8e-27 126.7 107 61.7
MCO05G599 Micromonas commoda HOM05D004634 ORTHO05D005502 1.2e-22 111.3 227 33.9
CsaV3_7G001200 Cucumis sativus L. HOM05D004634 ORTHO05D005502 6.3e-19 99.0 152 45.4
Cre03.g190150 Chlamydomonas reinhardtii HOM05D004634 ORTHO05D005502 1.2e-17 94.7 243 32.9
CsaV3_7G001190 Cucumis sativus L. HOM05D004634 ORTHO05D005502 2.2e-16 90.5 63 73.0
BcaC07g41182 Brassica carinata HOM05D004634 ORTHO05D005502 2.3e-13 80.5 58 74.1
Actinidia32030 Actinidia chinensis HOM05D004634 ORTHO05D005502 4.0e-13 79.7 121 46.3
PRCOL_00007096 Prasinoderma coloniale HOM05D004634 ORTHO05D005502 2.7e-09 67.0 177 31.6
TWI60G0248 Tripterygium wilfordii HOM05D000764 ORTHO05D002819 1.0e-08 65.1 221 29.0
AUR62032163 Chenopodium quinoa HOM05D000764 ORTHO05D002819 4.3e-07 59.7 205 26.3
Sc10g0009640 Simmondsia chinensis HOM05D000764 ORTHO05D002819 5.6e-07 59.3 214 27.1
EL10Ac5g11218 Beta vulgaris HOM05D000764 ORTHO05D002819 1.6e-06 57.8 204 25.0
CAN.G982.7 Capsicum annuum HOM05D000764 ORTHO05D002819 2.8e-06 57.0 243 27.2
TWI81G0887 Tripterygium wilfordii HOM05D000764 ORTHO05D002819 2.8e-06 57.0 195 28.2
AUR62036921 Chenopodium quinoa HOM05D000764 ORTHO05D002819 4.7e-06 56.2 204 25.5
MELO3C017270.2 Cucumis melo HOM05D000764 ORTHO05D002819 4.7e-06 56.2 168 27.4
Sed0013361 Sechium edule HOM05D000764 ORTHO05D002819 4.7e-06 56.2 168 27.4
TPR.G23891 Trifolium pratense HOM05D000764 ORTHO05D002819 4.7e-06 56.2 194 27.3
CDE02G0712 Ceratophyllum demersum HOM05D000764 ORTHO05D002819 6.1e-06 55.8 193 26.4
Eucgr.K02640 Eucalyptus grandis HOM05D000764 ORTHO05D002819 6.1e-06 55.8 168 26.8
Peaxi162Scf00017g03138 Petunia axillaris HOM05D000764 ORTHO05D002819 6.1e-06 55.8 185 24.9
Pp3c15_20170 Physcomitrium patens HOM05D000764 ORTHO05D002819 8.0e-06 55.5 253 27.7
Solyc03g114470.2 Solanum lycopersicum HOM05D000764 ORTHO05D002819 8.0e-06 55.5 178 27.5


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