Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04812 Brassica carinata HOM05D005518 ORTHO05D001269 5.1e-289 997.3 591 100.0
C03p33530 Brassica napus HOM05D005518 ORTHO05D001269 9.0e-286 986.5 591 99.0
BolC3t15674H Brassica oleracea HOM05D005518 ORTHO05D001269 9.0e-286 986.5 591 98.6
BraA03t11991Z Brassica rapa HOM05D005518 ORTHO05D001269 5.1e-273 944.1 592 94.6
A03p27800 Brassica napus HOM05D005518 ORTHO05D001269 1.1e-272 943.0 592 91.6
BcaB01g02898 Brassica carinata HOM05D004180 ORTHO05D001269 1.1e-251 873.2 587 87.6
Sp6g12480 Schrenkiella parvula HOM05D005518 ORTHO05D001269 1.2e-234 816.6 599 81.5
Thhalv10013029m.g Eutrema salsugineum HOM05D005518 ORTHO05D001269 4.8e-223 778.1 600 78.7
AL8G24460 Arabidopsis lyrata HOM05D005518 ORTHO05D001269 6.8e-209 731.1 596 72.7
Carub.0008s1043 Capsella rubella HOM05D005518 ORTHO05D001269 8.9e-201 704.1 630 72.5
AT5G50350 Arabidopsis thaliana HOM05D005518 ORTHO05D001269 5.0e-196 688.3 595 70.6
CARHR258130 Cardamine hirsuta HOM05D005518 ORTHO05D001269 9.8e-192 674.1 600 70.0
Aa31LG3G5820 Aethionema arabicum HOM05D005518 ORTHO05D001269 9.6e-171 604.4 632 65.2
THA.LOC104825006 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 5.1e-124 449.1 606 53.0
THA.LOC104803143 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 4.5e-120 436.0 638 54.4
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 1.7e-82 311.2 643 39.5
Thecc.03G124400 Theobroma cacao HOM05D005518 ORTHO05D001269 5.4e-81 306.2 647 38.6
Gorai.006G270900 Gossypium raimondii HOM05D005518 ORTHO05D001269 1.6e-80 304.7 645 39.5
Duzib205G1346 Durio zibethinus HOM05D005518 ORTHO05D001269 8.6e-79 298.9 648 40.4
COL.COLO4_16831 Corchorus olitorius HOM05D005518 ORTHO05D001269 2.5e-78 297.4 645 41.2
Gohir.D09G246400 Gossypium hirsutum HOM05D005518 ORTHO05D001269 2.5e-78 297.4 643 39.8
Gohir.A09G245800 Gossypium hirsutum HOM05D005518 ORTHO05D001269 3.6e-77 293.5 652 39.4
CiPaw.12G036400 Carya illinoinensis HOM05D005518 ORTHO05D001269 7.5e-75 285.8 652 37.7
Potri.012G094200 Populus trichocarpa HOM05D005518 ORTHO05D001269 3.7e-74 283.5 637 39.6
PGR044G0025 Punica granatum HOM05D005518 ORTHO05D001269 3.7e-74 283.5 632 38.6
Sabra12G0068800 Salix brachista HOM05D005518 ORTHO05D001269 1.9e-73 281.2 638 38.1
CANSAT80G2082 Cannabis sativa HOM05D005518 ORTHO05D001269 2.4e-73 280.8 657 37.0
Potri.015G091500 Populus trichocarpa HOM05D005518 ORTHO05D001269 3.2e-73 280.4 639 40.4
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 5.1e-71 273.1 656 37.0
QL10p004779 Quercus lobata HOM05D005518 ORTHO05D001269 1.6e-69 268.1 619 38.0
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 2.1e-69 267.7 653 37.5
Ciclev10019441m.g Citrus clementina HOM05D005518 ORTHO05D001269 4.7e-69 266.5 613 40.5
Manes.06G116500 Manihot esculenta HOM05D005518 ORTHO05D001269 6.8e-68 262.7 617 37.0
CiPaw.11G011000 Carya illinoinensis HOM05D005518 ORTHO05D001269 8.9e-68 262.3 659 35.7
Haze_07258 Corylus avellana HOM05D005518 ORTHO05D001269 1.5e-67 261.5 573 40.3
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 2.6e-67 260.8 674 36.1
Actinidia16187 Actinidia chinensis HOM05D005518 ORTHO05D001269 3.4e-67 260.4 639 38.3
TWI14G0969 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 5.8e-67 259.6 646 37.3
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 1.7e-66 258.1 624 38.8
Prupe.5G155700 Prunus persica HOM05D005518 ORTHO05D001269 2.9e-66 257.3 655 35.6
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 3.8e-66 256.9 605 38.5
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 3.8e-66 256.9 665 34.6
Sabra15G0113400 Salix brachista HOM05D005518 ORTHO05D001269 4.9e-66 256.5 659 36.4
Eucgr.K02750 Eucalyptus grandis HOM05D005518 ORTHO05D001269 8.4e-66 255.8 652 36.0
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 1.9e-65 254.6 624 38.6
FAN13G1318 Fragaria x ananassa HOM05D005518 ORTHO05D001269 7.1e-65 252.7 661 36.0
Lj1g0006481 Lotus japonicus HOM05D005518 ORTHO05D001269 7.1e-65 252.7 630 38.7
Gorai.007G042000 Gossypium raimondii HOM05D005518 ORTHO05D001269 9.2e-65 252.3 658 35.4
arahy.Tifrunner.gnm1.ann1.P5I184 Arachis hypogaea HOM05D001134 ORTHO05D001269 1.2e-64 251.9 598 39.6
FvH4_5g07650 Fragaria vesca HOM05D005518 ORTHO05D001269 1.6e-64 251.5 653 37.4
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.6e-64 251.5 650 37.5
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 3.5e-64 250.4 667 36.3
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea HOM05D005518 ORTHO05D001269 7.8e-64 249.2 603 39.3
FAN04G1413 Fragaria x ananassa HOM05D005518 ORTHO05D001269 7.8e-64 249.2 665 35.8
Manes.14G054500 Manihot esculenta HOM05D005518 ORTHO05D001269 7.8e-64 249.2 621 37.4
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.0e-63 248.8 651 36.9
Gohir.A11G035500 Gossypium hirsutum HOM05D005518 ORTHO05D001269 3.9e-63 246.9 664 34.9
Duzib084G0018 Durio zibethinus HOM05D005518 ORTHO05D001269 1.1e-62 245.4 722 32.8
Gohir.D11G039100 Gossypium hirsutum HOM05D005518 ORTHO05D001269 1.1e-62 245.4 658 34.8
Lalb_Chr11g0069691 Lupinus albus HOM05D005518 ORTHO05D001269 5.6e-62 243.0 647 36.5
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 7.3e-62 242.7 635 36.7
Actinidia36793 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.6e-61 241.5 654 35.5
CSS0041106 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 6.9e-60 236.1 648 37.0
Phvul.009G168300 Phaseolus vulgaris HOM05D005518 ORTHO05D001269 3.4e-59 233.8 644 37.0
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 3.4e-59 233.8 655 34.7
TWI23G0187 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 5.8e-59 233.0 651 38.1
CsaV3_1G009430 Cucumis sativus L. HOM05D005518 ORTHO05D001269 9.9e-59 232.3 646 34.4
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 4.9e-58 229.9 649 36.7
Nn1g07622 Nelumbo nucifera HOM05D005518 ORTHO05D001269 6.4e-58 229.6 666 36.3
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 6.4e-58 229.6 650 37.8
Rhsim12G0172400 Rhododendron simsii HOM05D005518 ORTHO05D001269 1.6e-56 224.9 656 38.1
Sed0017473 Sechium edule HOM05D005518 ORTHO05D001269 1.6e-56 224.9 648 34.6
ClCG03G003580 Citrullus lanatus HOM05D005518 ORTHO05D001269 2.7e-56 224.2 678 33.8
SGA_v2.0_scaffold37G14614 Striga asiatica HOM05D005518 ORTHO05D001269 1.7e-55 221.5 637 35.5
Hund02416 Selenicereus undatus HOM05D005518 ORTHO05D001269 3.0e-55 220.7 630 37.8
Sed0015656 Sechium edule HOM05D005518 ORTHO05D001269 3.9e-55 220.3 636 33.2
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 1.5e-54 218.4 661 36.0
DCAR_007472 Daucus carota HOM05D005518 ORTHO05D001269 7.3e-54 216.1 648 34.4
Migut.D01234 Erythranthe guttata HOM05D005518 ORTHO05D001269 7.3e-54 216.1 640 34.8
VMungo1309G2768 Vigna mungo HOM05D005518 ORTHO05D001269 1.5e-51 208.4 633 38.9
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 2.6e-51 207.6 637 36.7
MELO3C002344.2 Cucumis melo HOM05D005518 ORTHO05D001269 2.9e-50 204.1 640 34.2
Peaxi162Scf00089g00324 Petunia axillaris HOM05D005518 ORTHO05D001269 1.9e-49 201.4 639 34.9
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 4.2e-49 200.3 630 37.5
PGSC0003DMG400015252 Solanum tuberosum HOM05D005518 ORTHO05D001269 1.8e-47 194.9 616 36.7
AUR62029840 Chenopodium quinoa HOM05D005518 ORTHO05D001269 6.7e-47 193.0 643 33.3
Oeu055998.1 Olea europaea HOM05D005518 ORTHO05D001269 6.7e-47 193.0 622 35.2
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 8.7e-47 192.6 625 37.3
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 1.1e-46 192.2 670 36.7
SalBow1G4741 Salvia bowleyana HOM05D005518 ORTHO05D001269 1.5e-46 191.8 553 40.3
CDE06G2288 Ceratophyllum demersum HOM05D005518 ORTHO05D005913 1.9e-46 191.4 637 32.0
AUR62025869 Chenopodium quinoa HOM05D005518 ORTHO05D001269 1.9e-46 191.4 627 33.0
Sopen03g030200 Solanum pennellii HOM05D005518 ORTHO05D001269 3.3e-46 190.7 590 37.1
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 8.1e-45 186.0 543 37.0
Solyc03g111030.3 Solanum lycopersicum HOM05D005518 ORTHO05D001269 1.1e-44 185.7 592 37.8
MSTRG.22916 Avicennia marina HOM05D005518 ORTHO05D001269 1.8e-44 184.9 654 33.8
CAN.G352.49 Capsicum annuum HOM05D005518 ORTHO05D001269 5.3e-44 183.3 615 35.4
Lj9A476T55 Lonicera japonica HOM05D005518 ORTHO05D001269 2.0e-43 181.4 578 33.9
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 3.4e-43 180.6 673 34.3
Nitab4.5_0005327g0060 Nicotiana tabacum HOM05D005518 ORTHO05D001269 3.8e-42 177.2 624 34.6
MD06G1148700 Malus domestica HOM05D005518 ORTHO05D001269 3.2e-41 174.1 623 33.9
Zm00001eb388520 Zea mays HOM05D005518 ORTHO05D001269 5.5e-41 173.3 619 33.4
Nitab4.5_0001664g0120 Nicotiana tabacum HOM05D005518 ORTHO05D001269 7.1e-41 172.9 606 34.7
Sc04g0000850 Simmondsia chinensis HOM05D005518 ORTHO05D001269 7.1e-41 172.9 631 31.5
ATR0751G048 Amborella trichopoda HOM05D005518 ORTHO05D001269 2.7e-40 171.0 667 33.3
HanXRQChr02g0035181 Helianthus annuus HOM05D005518 ORTHO05D001269 1.0e-39 169.1 601 31.6
PSO063G3591 Papaver somniferum HOM05D005518 ORTHO05D001269 1.0e-39 169.1 634 31.2
ECA247G0960 Erigeron canadensis HOM05D005518 ORTHO05D001269 1.3e-39 168.7 618 32.0
Aqoxy4G02270 Aquilegia oxysepala HOM05D005518 ORTHO05D001269 8.7e-39 166.0 428 33.6
EL10As4g23466 Beta vulgaris HOM05D005518 ORTHO05D001269 1.1e-38 165.6 581 33.0
HanXRQChr04g0100301 Helianthus annuus HOM05D005518 ORTHO05D001269 1.1e-38 165.6 626 33.4
Lsat_1_v5_gn_1_29580 Lactuca sativa HOM05D005518 ORTHO05D001269 3.3e-38 164.1 641 34.8
Oeu006376.1 Olea europaea HOM05D005518 ORTHO05D001269 2.1e-37 161.4 348 36.8
Os06g0609800 Oryza sativa ssp. japonica HOM05D005518 ORTHO05D001269 3.1e-36 157.5 601 31.1
CDE03G0480 Ceratophyllum demersum HOM05D005518 ORTHO05D001269 4.0e-36 157.1 626 30.4
Oeu023474.2 Olea europaea HOM05D005518 ORTHO05D001269 6.9e-36 156.4 617 34.5
MSTRG.9316 Avicennia marina HOM05D005518 ORTHO05D001269 9.0e-36 156.0 624 33.2
CSS0040133 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.0e-34 152.5 258 43.8
vmacro16713 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 1.8e-28 131.7 259 40.5
Ca_25438_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 3.8e-26 124.0 193 41.5
Migut.I00490 Erythranthe guttata HOM05D005518 ORTHO05D001269 1.1e-25 122.5 546 31.3
Duzib068G1391 Durio zibethinus HOM05D005518 ORTHO05D001269 2.1e-24 118.2 307 36.5
MD14G1162600 Malus domestica HOM05D005518 ORTHO05D001269 1.2e-19 102.4 197 38.6
Actinidia25603 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.4e-17 95.5 348 33.6
MD14G1162500 Malus domestica HOM05D005518 ORTHO05D001269 1.9e-17 95.1 346 33.5
Sc22g0004150 Simmondsia chinensis HOM05D005518 ORTHO05D001269 1.2e-16 92.4 290 33.4
SEGI_11479 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 1.6e-16 92.0 249 32.9
HPP92_027039 Vanilla planifolia HOM05D005518 ORTHO05D001269 6.9e-12 76.6 297 31.3
arahy.Tifrunner.gnm1.ann1.QJ9WGP Arachis hypogaea HOM05D001134 ORTHO05D001035 1.5e-11 75.5 109 46.8
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 1.7e-10 72.0 387 28.9
Cfa018874 Carpinus fangiana HOM05D005518 ORTHO05D001269 8.5e-10 69.7 101 49.5
Sc22g0004140 Simmondsia chinensis HOM05D005518 ORTHO05D001269 7.2e-09 66.6 101 47.5
unitig_22.g5764 Utricularia gibba HOM05D005518 ORTHO05D001269 9.4e-09 66.2 221 26.2
CSS0031701 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.6e-08 65.5 410 26.8
Ca_16087_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 7.9e-08 63.2 122 46.7
Thecc.10G130100 Theobroma cacao HOM05D007286 ORTHO05D008955 1.0e-07 62.8 104 41.3
Gohir.A05G285500 Gossypium hirsutum HOM05D007286 ORTHO05D008955 1.4e-07 62.4 234 31.6
COL.COLO4_28923 Corchorus olitorius HOM05D007286 ORTHO05D008955 1.8e-07 62.0 105 41.9
Gorai.009G301600 Gossypium raimondii HOM05D007286 ORTHO05D008955 1.8e-07 62.0 234 31.6
Gohir.D05G286600 Gossypium hirsutum HOM05D007286 ORTHO05D008955 3.0e-07 61.2 234 31.2
Duzib128G1558 Durio zibethinus HOM05D000138 ORTHO05D008955 3.9e-07 60.8 100 42.0
MBI19_g06405_MAGBIO Magnolia biondii HOM05D007286 ORTHO05D008955 5.2e-07 60.5 100 43.0
Migut.B01162 Erythranthe guttata HOM05D007286 ORTHO05D008955 2.0e-06 58.5 100 41.0
Actinidia08857 Actinidia chinensis HOM05D005518 ORTHO05D001269 3.3e-06 57.8 89 47.2
Glyma.08G227900 Glycine max HOM05D007286 ORTHO05D008955 3.3e-06 57.8 240 27.1
Eucgr.G02637 Eucalyptus grandis HOM05D007286 ORTHO05D008955 5.7e-06 57.0 100 42.0
ATR0307G001 Amborella trichopoda HOM05D007286 ORTHO05D008955 7.4e-06 56.6 336 25.9
Sabra10G0192500 Salix brachista HOM05D007286 ORTHO05D008955 7.4e-06 56.6 93 46.2
Sc09g0004920 Simmondsia chinensis HOM05D007286 ORTHO05D008955 7.4e-06 56.6 97 47.4
vmacro16712 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 9.7e-06 56.2 175 32.6


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