Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04684 Brassica carinata HOM05D008653 ORTHO05D012633 3.8e-35 151.0 77 100.0
BcaC09g51021 Brassica carinata HOM05D000022 ORTHO05D000071 8.2e-22 106.7 72 76.4
BcaB02g09587 Brassica carinata HOM05D008653 ORTHO05D012633 1.1e-21 106.3 73 74.0
BolC4t27637H Brassica oleracea HOM05D000003 ORTHO05D000925 1.7e-19 99.0 72 68.1
BcaC08g42937 Brassica carinata HOM05D000003 ORTHO05D000925 3.8e-19 97.8 69 71.0
BolC6t37680H Brassica oleracea HOM05D008653 ORTHO05D012633 5.5e-18 94.0 71 69.0
C02p09520 Brassica napus HOM05D008653 ORTHO05D012633 1.2e-17 92.8 71 67.6
BcaB03g14913 Brassica carinata HOM05D008653 ORTHO05D012633 4.6e-17 90.9 69 71.0
C09p67320 Brassica napus HOM05D000042 ORTHO05D003657 1.8e-16 89.0 66 66.7
C01p06420 Brassica napus HOM05D008653 ORTHO05D012633 5.1e-16 87.4 71 66.2
A08p14860 Brassica napus HOM05D008653 ORTHO05D012633 5.7e-15 84.0 63 63.5
BolC9t59496H Brassica oleracea HOM05D000042 ORTHO05D003657 9.7e-15 83.2 70 62.9
BraA04t18944Z Brassica rapa HOM05D008653 ORTHO05D000925 1.1e-13 79.7 71 59.2
BraA06t23596Z Brassica rapa HOM05D008653 ORTHO05D012633 1.4e-13 79.3 55 72.7
BcaB03g13451 Brassica carinata HOM05D008653 ORTHO05D012633 1.8e-13 79.0 69 60.9
BolC7t42161H Brassica oleracea HOM05D008653 ORTHO05D000925 2.4e-13 78.6 73 54.8
BolC2t08004H Brassica oleracea HOM05D008653 ORTHO05D000925 1.2e-12 76.3 72 56.9
BcaB05g25306 Brassica carinata HOM05D000003 ORTHO05D000925 3.4e-12 74.7 59 62.7
BcaC05g29080 Brassica carinata HOM05D000003 ORTHO05D000925 4.5e-12 74.3 65 56.9
BraA07t29234Z Brassica rapa HOM05D008653 ORTHO05D012633 1.0e-11 73.2 60 61.7
BcaC02g09910 Brassica carinata HOM05D030019 ORTHO05D012633 1.7e-11 72.4 72 51.4
BolC6t35664H Brassica oleracea HOM05D008653 ORTHO05D000925 2.9e-11 71.6 73 50.7
A04p11740 Brassica napus HOM05D030019 ORTHO05D012633 5.0e-11 70.9 72 50.0
BolC1t05657H Brassica oleracea HOM05D008653 ORTHO05D012633 8.5e-11 70.1 53 64.2
BraA06t26944Z Brassica rapa HOM05D008653 ORTHO05D000925 2.7e-09 65.1 74 44.6
BolC5t31031H Brassica oleracea HOM05D008653 ORTHO05D000925 2.6e-07 58.5 56 51.8
C03p52090 Brassica napus HOM05D001239 ORTHO05D000925 3.3e-07 58.2 67 50.7
BolC3t17489H Brassica oleracea HOM05D001239 ORTHO05D000925 3.3e-07 58.2 67 50.7
BcaB04g18173 Brassica carinata HOM05D001239 ORTHO05D000925 5.7e-07 57.4 67 47.8
Thhalv10011015m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 9.7e-07 56.6 72 40.3
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-06 54.7 67 47.8
Thhalv10000670m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 6.3e-06 53.9 72 40.3


User provided reference genes

Program Settings