Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04531 Brassica carinata HOM05D000631 ORTHO05D095494 2.9e-29 132.1 125 100.0
C03p39490 Brassica napus HOM05D000631 ORTHO05D000524 1.4e-26 123.2 120 100.0
BolC3t16217H Brassica oleracea HOM05D000631 ORTHO05D000524 1.4e-26 123.2 120 100.0
A03p32430 Brassica napus HOM05D000631 ORTHO05D000524 7.5e-25 117.5 125 90.4
BraA03t12413Z Brassica rapa HOM05D000631 ORTHO05D000524 7.5e-25 117.5 125 95.2
BcaC05g30457 Brassica carinata HOM05D000631 ORTHO05D000524 3.7e-24 115.2 121 66.1
BcaC01g04532 Brassica carinata HOM05D000631 ORTHO05D000524 1.3e-21 106.7 123 85.4
BraA05t23212Z Brassica rapa HOM05D000631 ORTHO05D000524 2.1e-19 99.4 125 62.4
A05p44440 Brassica napus HOM05D000631 ORTHO05D000524 6.8e-18 94.4 126 60.3
CARHR075270 Cardamine hirsuta HOM05D000631 ORTHO05D000524 1.3e-16 90.1 120 85.0
Sp3g00400 Schrenkiella parvula HOM05D000631 ORTHO05D000524 2.2e-16 89.4 140 56.4
BcaC05g30418 Brassica carinata HOM05D000631 ORTHO05D000524 2.7e-14 82.4 104 62.5
Thhalv10020651m.g Eutrema salsugineum HOM05D000631 ORTHO05D000524 6.0e-14 81.3 137 56.9
Aa31LG5G10790 Aethionema arabicum HOM05D000631 ORTHO05D000524 7.8e-14 80.9 131 62.6
C09p75020 Brassica napus HOM05D000631 ORTHO05D000524 1.5e-12 76.6 126 54.8
Aa31LG11G15200 Aethionema arabicum HOM05D000631 ORTHO05D000524 3.3e-12 75.5 130 40.8
Sp6g29600 Schrenkiella parvula HOM05D000631 ORTHO05D000524 4.3e-12 75.1 133 52.6
BcaB01g06326 Brassica carinata HOM05D000631 ORTHO05D000524 2.8e-11 72.4 132 53.8
BcaB01g06374 Brassica carinata HOM05D000631 ORTHO05D000524 2.8e-11 72.4 132 53.8
AT3G01650 Arabidopsis thaliana HOM05D000631 ORTHO05D000524 6.2e-11 71.2 159 61.6
C09p62740 Brassica napus HOM05D000631 ORTHO05D000524 8.9e-10 67.4 130 42.3
BolC9t59111H Brassica oleracea HOM05D000631 ORTHO05D000524 8.9e-10 67.4 130 49.2
BraA10t44475Z Brassica rapa HOM05D000631 ORTHO05D000524 8.9e-10 67.4 130 49.2
BraA03t09992Z Brassica rapa HOM05D000631 ORTHO05D000524 1.2e-09 67.0 132 51.5
Carub.0003s0041 Capsella rubella HOM05D000631 ORTHO05D000524 3.4e-09 65.5 33 97.0
AT5G14420 Arabidopsis thaliana HOM05D000631 ORTHO05D000524 4.4e-09 65.1 128 44.5
AL3G10500 Arabidopsis lyrata HOM05D000631 ORTHO05D000524 9.9e-09 63.9 34 94.1
AL6G25140 Arabidopsis lyrata HOM05D000631 ORTHO05D000524 2.9e-08 62.4 128 49.2
CARHR198890 Cardamine hirsuta HOM05D000631 ORTHO05D000524 6.4e-08 61.2 131 42.7
C02p06740 Brassica napus HOM05D000631 ORTHO05D000524 8.3e-08 60.8 127 56.7
BraA02t05219Z Brassica rapa HOM05D000631 ORTHO05D000524 1.4e-07 60.1 120 57.5
THA.LOC104821098 Tarenaya hassleriana HOM05D000631 ORTHO05D000524 1.9e-07 59.7 120 37.5
BolC2t06619H Brassica oleracea HOM05D000631 ORTHO05D000524 2.4e-07 59.3 127 55.9
Carub.0006s1260 Capsella rubella HOM05D000631 ORTHO05D000524 3.2e-07 58.9 130 43.8
Thecc.04G021000 Theobroma cacao HOM05D000631 ORTHO05D000524 4.1e-07 58.5 122 57.4
BcaNung03156 Brassica carinata HOM05D000631 ORTHO05D000524 7.1e-07 57.8 126 50.0
CsaV3_3G042930 Cucumis sativus L. HOM05D000631 ORTHO05D000524 1.6e-06 56.6 34 76.5
Migut.K01415 Erythranthe guttata HOM05D000631 ORTHO05D000524 1.6e-06 56.6 33 78.8
Gohir.D04G059000 Gossypium hirsutum HOM05D000631 ORTHO05D000524 2.1e-06 56.2 122 48.4
Gorai.012G065700 Gossypium raimondii HOM05D000631 ORTHO05D000524 2.1e-06 56.2 122 48.4
SGA_v2.0_scaffold135G34922 Striga asiatica HOM05D000631 ORTHO05D000524 2.1e-06 56.2 33 78.8
Lju41C44G7 Lonicera japonica HOM05D000631 ORTHO05D000524 4.6e-06 55.1 33 78.8
arahy.Tifrunner.gnm1.ann1.T6F2TX Arachis hypogaea HOM05D000631 ORTHO05D000524 7.8e-06 54.3 126 34.9
ECA232G0637 Erigeron canadensis HOM05D000631 ORTHO05D000524 7.8e-06 54.3 33 75.8
Glyma.05G115700 Glycine max HOM05D000631 ORTHO05D000524 7.8e-06 54.3 130 37.7
HanXRQChr09g0255511 Helianthus annuus HOM05D000631 ORTHO05D000524 7.8e-06 54.3 33 75.8
Lj7A602G39 Lonicera japonica HOM05D000631 ORTHO05D000524 7.8e-06 54.3 33 75.8


User provided reference genes

Program Settings