Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04505 Brassica carinata HOM05D004723 ORTHO05D019910 1.7e-55 219.2 117 100.0
BraA03t12436Z Brassica rapa HOM05D004723 ORTHO05D019910 1.4e-49 199.5 117 89.7
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 7.8e-32 140.6 117 72.6
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 1.0e-28 130.2 123 65.9
C03p39780 Brassica napus HOM05D004723 ORTHO05D019910 7.5e-27 124.0 117 65.8
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 3.7e-26 121.7 123 61.8
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 7.0e-25 117.5 122 59.8
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 7.8e-24 114.0 125 59.2
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 1.3e-23 113.2 123 57.7
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 1.3e-23 113.2 123 58.5
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 1.7e-23 112.8 124 58.9
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 7.3e-22 107.5 124 57.3
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 7.8e-16 87.4 126 48.4
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 3.0e-15 85.5 126 46.8
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 3.9e-15 85.1 127 47.2
A03p32680 Brassica napus HOM05D004723 ORTHO05D019910 8.6e-15 84.0 117 47.9
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 9.5e-14 80.5 128 47.7
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 9.9e-11 70.5 126 42.9
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 9.9e-11 70.5 126 41.3
C03p39890 Brassica napus HOM05D004723 ORTHO05D019910 5.4e-09 64.7 37 78.4
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 4.6e-08 61.6 101 38.6
BolC3t16251H Brassica oleracea HOM05D004723 ORTHO05D019910 1.3e-07 60.1 36 75.0
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 3.9e-07 58.5 49 57.1
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 5.1e-07 58.2 101 36.6
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 6.6e-07 57.8 113 36.3
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 6.6e-07 57.8 126 38.1
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 6.6e-07 57.8 96 36.5
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 6.6e-07 57.8 121 37.2
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 1.1e-06 57.0 99 40.4
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 1.5e-06 56.6 121 36.4
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 2.5e-06 55.8 101 38.6
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 2.5e-06 55.8 113 36.3
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 3.3e-06 55.5 121 35.5
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 3.3e-06 55.5 78 44.9
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 3.3e-06 55.5 113 39.8
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 3.3e-06 55.5 104 39.4
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 5.6e-06 54.7 101 35.6
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 7.3e-06 54.3 126 36.5


User provided reference genes

Program Settings