Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04306 Brassica carinata HOM05D010296 ORTHO05D011853 1.5e-206 723.0 466 100.0
BolC3t16466H Brassica oleracea HOM05D000351 ORTHO05D011853 4.5e-200 701.4 466 97.6
C03p41830 Brassica napus HOM05D000351 ORTHO05D011853 2.8e-194 682.2 466 95.9
BcaB04g19238 Brassica carinata HOM05D010296 ORTHO05D011853 9.6e-142 507.7 480 75.6
BraA03t12612Z Brassica rapa HOM05D010296 ORTHO05D011853 1.4e-129 467.2 475 74.5
A03p34360 Brassica napus HOM05D000351 ORTHO05D011853 1.1e-126 457.6 470 74.0
Sp3g04790 Schrenkiella parvula HOM05D010296 ORTHO05D011853 1.9e-113 413.7 596 57.2
BcaB04g19235 Brassica carinata HOM05D010296 ORTHO05D011853 7.7e-83 312.0 375 62.9
BcaB04g19236 Brassica carinata HOM05D010296 ORTHO05D011853 6.8e-79 298.9 453 51.7
AT3G05900 Arabidopsis thaliana HOM05D010296 ORTHO05D011853 6.4e-77 292.4 677 40.6
AL3G16660 Arabidopsis lyrata HOM05D010296 ORTHO05D011853 5.9e-75 285.8 714 39.4
Thhalv10020449m.g Eutrema salsugineum HOM05D010296 ORTHO05D011853 1.1e-73 281.6 553 49.2
C05p61370 Brassica napus HOM05D010296 ORTHO05D011853 1.2e-72 278.1 593 50.3
BolC5t34796H Brassica oleracea HOM05D010296 ORTHO05D011853 2.6e-70 270.4 546 52.7
CARHR080360 Cardamine hirsuta HOM05D010296 ORTHO05D011853 2.0e-67 260.8 721 37.4
Carub.0003s0527 Capsella rubella HOM05D010296 ORTHO05D011853 1.2e-64 251.5 710 37.6
A05p42160 Brassica napus HOM05D010296 ORTHO05D011853 1.9e-60 237.7 533 51.2
BcaC09g47860 Brassica carinata HOM05D010296 ORTHO05D011853 2.7e-43 180.6 479 39.7
BraA01t04465Z Brassica rapa HOM05D010296 ORTHO05D011853 1.5e-41 174.9 471 40.1
THA.LOC104818758 Tarenaya hassleriana HOM05D010296 ORTHO05D011853 4.8e-40 169.9 521 40.9
BraA05t22934Z Brassica rapa HOM05D010296 ORTHO05D011853 1.3e-37 161.8 501 45.3
Aa31LG5G16310 Aethionema arabicum HOM05D010296 ORTHO05D011853 1.1e-25 122.1 484 37.2
CARHR186870 Cardamine hirsuta HOM05D010296 ORTHO05D011853 5.7e-17 93.2 173 50.9
Thhalv10004472m.g Eutrema salsugineum HOM05D010296 ORTHO05D011853 2.8e-16 90.9 261 41.8
BolC1t05654H Brassica oleracea HOM05D010296 ORTHO05D011853 8.7e-10 69.3 474 35.7
Actinidia11694 Actinidia chinensis HOM05D023883 ORTHO05D010151 5.3e-07 60.1 296 33.4


User provided reference genes

Program Settings