Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04259 Brassica carinata HOM05D008686 ORTHO05D010632 6.4e-126 454.1 237 100.0
BcaC07g37453 Brassica carinata HOM05D008686 ORTHO05D010632 1.1e-106 390.2 243 84.8
BolC3t16607H Brassica oleracea HOM05D008686 ORTHO05D010632 3.8e-94 348.6 216 85.6
BcaC09g50702 Brassica carinata HOM05D008686 ORTHO05D010632 4.2e-77 292.0 237 70.5
BcaC08g43572 Brassica carinata HOM05D008686 ORTHO05D010632 5.7e-66 255.0 216 67.1
BcaC08g45173 Brassica carinata HOM05D008686 ORTHO05D010632 2.3e-46 189.9 243 53.9
BcaC03g15446 Brassica carinata HOM05D008686 ORTHO05D010632 1.1e-45 187.6 227 53.3
BcaB06g27296 Brassica carinata HOM05D008686 ORTHO05D010632 2.6e-34 149.8 288 36.8
BcaC03g18045 Brassica carinata HOM05D008686 ORTHO05D010632 2.6e-34 149.8 220 40.5
BcaC06g36452 Brassica carinata HOM05D008686 ORTHO05D010632 5.8e-34 148.7 287 36.2
BcaC08g44776 Brassica carinata HOM05D008686 ORTHO05D010632 8.3e-33 144.8 285 35.4
BcaC09g49648 Brassica carinata HOM05D008686 ORTHO05D010632 1.7e-30 137.1 266 35.3
BcaC02g09682 Brassica carinata HOM05D008686 ORTHO05D010632 8.6e-30 134.8 212 40.1
Sp7g05610 Schrenkiella parvula HOM05D008686 ORTHO05D010632 2.6e-26 123.2 251 34.7
BcaC04g22807 Brassica carinata HOM05D008686 ORTHO05D010632 7.6e-26 121.7 263 34.6
CARHR114920 Cardamine hirsuta HOM05D008686 ORTHO05D010632 7.1e-24 115.2 275 31.3
Sp1g34790 Schrenkiella parvula HOM05D008686 ORTHO05D010632 2.1e-20 103.6 218 33.0
Carub.0005s2790 Capsella rubella HOM05D008686 ORTHO05D010632 6.8e-19 98.6 238 31.5
Carub.0008s1611 Capsella rubella HOM05D008686 ORTHO05D010632 6.8e-19 98.6 244 30.7
Sp2g05560 Schrenkiella parvula HOM05D008686 ORTHO05D010632 6.8e-19 98.6 231 31.2
Carub.0004s0690 Capsella rubella HOM05D008686 ORTHO05D010632 2.0e-18 97.1 273 28.9
Carub.0001s3313 Capsella rubella HOM05D008686 ORTHO05D010632 9.9e-18 94.7 271 28.8
SpUn0001_0450 Schrenkiella parvula HOM05D008686 ORTHO05D010632 1.9e-13 80.5 143 37.1
Sp7g07950 Schrenkiella parvula HOM05D008686 ORTHO05D010632 3.1e-11 73.2 265 25.7
Sp1g30550 Schrenkiella parvula HOM05D008686 ORTHO05D010632 9.0e-11 71.6 89 39.3
BraA04t16859Z Brassica rapa HOM05D008686 ORTHO05D010632 1.9e-08 63.9 56 55.4
Sp7g04920 Schrenkiella parvula HOM05D016270 ORTHO05D019360 1.2e-07 61.2 236 25.8
Sp7g03840 Schrenkiella parvula HOM05D016270 ORTHO05D019360 1.3e-06 57.8 228 26.8
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 2.3e-06 57.0 48 58.3


User provided reference genes

Program Settings