Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04160 Brassica carinata HOM05D044084 ORTHO05D039729 2.2e-108 395.6 196 100.0
C06p14670 Brassica napus HOM05D044084 ORTHO05D039729 1.5e-32 143.7 68 100.0
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 2.2e-18 96.7 208 37.0
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-17 92.0 145 43.4
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-15 87.8 121 47.1
BcaC07g38309 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-15 87.4 128 46.9
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 2.9e-15 86.3 126 47.6
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-15 85.9 128 46.1
C08p10590 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-15 85.1 128 46.1
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-15 84.7 89 55.1
BcaC02g10703 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-14 84.3 128 46.1
BolC4t24108H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-14 84.3 128 46.1
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-14 84.0 89 57.3
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-14 82.0 193 38.3
C07p41800 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-13 79.0 92 53.3
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-12 77.4 110 45.5
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-12 76.6 103 47.6
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 3.0e-12 76.3 129 41.1
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-12 75.9 89 51.7
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 3.9e-12 75.9 147 38.8
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-12 75.1 121 41.3
BolC5t32686H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-12 75.1 89 52.8
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-11 74.3 86 52.3
BcaC01g02161 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-11 74.3 107 44.9
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-11 74.3 89 50.6
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-11 74.3 107 44.9
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-11 74.3 107 44.9
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-11 73.9 89 50.6
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-11 73.9 89 50.6
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-11 73.9 143 36.4
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-11 73.6 85 50.6
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-11 72.8 85 48.2
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-11 72.8 89 50.6
BcaNung02458 Brassica carinata HOM05D000313 ORTHO05D027470 4.3e-11 72.4 111 41.4
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-11 72.4 89 48.3
A07p11070 Brassica napus HOM05D000313 ORTHO05D000065 7.4e-11 71.6 91 42.9
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 7.4e-11 71.6 126 37.3
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 7.4e-11 71.6 126 37.3
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 7.4e-11 71.6 126 37.3
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-10 70.9 126 37.3
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-10 70.9 146 37.0
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-10 70.9 116 41.4
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-10 70.5 170 34.1
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-10 70.5 170 34.1
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-10 70.1 90 42.2
BolC1t04726H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-10 70.1 91 42.9
C03p52850 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-10 69.7 108 42.6
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-10 69.7 127 35.4
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-10 69.7 127 35.4
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-10 69.3 89 48.3
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-10 68.9 127 34.6
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-10 68.6 86 43.0
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-10 68.6 159 34.6
C03p10480 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-10 68.6 86 43.0
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-10 68.6 125 35.2
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-10 68.2 127 37.0
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-10 68.2 127 37.0
BolC9t55362H Brassica oleracea HOM05D000313 ORTHO05D000065 8.2e-10 68.2 76 52.6
A02p31310 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-09 67.8 89 41.6
C09p24470 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-09 67.8 75 52.0
BolC3t21218H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-09 67.8 68 55.9
BraA01t02116Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-09 67.8 89 41.6
C08p36910 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-09 67.4 68 55.9
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-09 67.0 89 47.2
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-09 66.6 54 66.7
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-09 66.6 91 40.7
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-09 66.6 91 40.7
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 2.4e-09 66.6 91 40.7
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-09 66.2 91 40.7
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-09 66.2 93 39.8
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 5.3e-09 65.5 87 40.2
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-09 65.5 98 42.9
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-09 65.5 93 38.7
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 6.9e-09 65.1 118 37.3
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-09 65.1 118 37.3
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-09 65.1 118 37.3
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 9.1e-09 64.7 126 32.5
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 9.1e-09 64.7 126 32.5
C07p40830 Brassica napus HOM05D000313 ORTHO05D027470 9.1e-09 64.7 83 43.4
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-08 64.3 145 32.4
A01p05990 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 64.3 84 40.5
C01p47570 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 64.3 91 40.7
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-08 64.3 134 34.3
BraA07t29209Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-08 64.3 84 40.5
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-08 63.9 98 40.8
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-08 63.5 98 40.8
C04p26900 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-08 63.2 109 43.1
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 2.6e-08 63.2 63 54.0
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 3.4e-08 62.8 90 37.8
BolC2t09667H Brassica oleracea HOM05D000313 ORTHO05D021747 3.4e-08 62.8 68 48.5
BcaC09g49506 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-08 62.4 62 51.6
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-08 62.4 81 39.5
C08p25290 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-08 62.4 55 58.2
BolC1t03321H Brassica oleracea HOM05D000313 ORTHO05D027416 4.5e-08 62.4 115 40.9
BolC1t03539H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-08 62.4 62 51.6
BolC8t50151H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-08 62.4 55 58.2
A03p61800 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 62.0 90 37.8
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 62.0 82 39.0
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 62.0 81 39.5
C02p19990 Brassica napus HOM05D021655 ORTHO05D027207 5.9e-08 62.0 69 47.8
C06p34380 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 62.0 98 41.8
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 62.0 81 39.5
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-08 62.0 119 34.5
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-08 62.0 81 39.5
BolC1t05664H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-08 62.0 80 38.8
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-08 62.0 124 35.5
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-08 62.0 124 32.3
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-08 61.6 91 38.5
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-07 61.2 124 32.3
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-07 61.2 124 31.5
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-07 61.2 124 31.5
BraA10t43815Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-07 61.2 100 38.0
BcaC03g15905 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 60.8 127 40.2
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-07 60.8 84 38.1
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-07 60.5 51 60.8
BcaNung07020 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-07 60.5 81 42.0
C01p35780 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-07 60.5 126 37.3
BraA06t24100Z Brassica rapa HOM05D000313 ORTHO05D000065 2.2e-07 60.1 80 37.5
A01p37550 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-07 59.7 81 42.0
C02p42250 Brassica napus HOM05D021655 ORTHO05D027207 2.9e-07 59.7 69 46.4
C09p38910 Brassica napus HOM05D000313 ORTHO05D032045 2.9e-07 59.7 105 44.8
BolC9t56761H Brassica oleracea HOM05D000313 ORTHO05D032045 2.9e-07 59.7 105 44.8
BcaC07g37052 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-07 59.3 136 36.8
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-07 59.3 89 38.2
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-07 58.9 121 31.4
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-07 58.9 119 33.6
C01p33700 Brassica napus HOM05D000313 ORTHO05D027416 5.0e-07 58.9 115 40.0
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 5.0e-07 58.9 81 39.5
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-07 58.5 99 41.4
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-07 58.5 121 31.4
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-07 58.5 121 32.2
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-07 58.5 82 41.5
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-07 58.5 121 32.2
C07p03910 Brassica napus HOM05D000313 ORTHO05D027416 6.5e-07 58.5 75 49.3
BolC3t13529H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-07 58.5 69 44.9
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-07 58.5 121 32.2
BolC5t33926H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-07 58.5 91 37.4
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-07 58.2 71 50.7
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 8.5e-07 58.2 71 50.7
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-06 57.8 121 29.8
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-06 57.8 123 30.9
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-06 57.8 121 33.9
BolC5t31824H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-06 57.8 81 37.0
BcaC09g49711 Brassica carinata HOM05D000313 ORTHO05D027416 1.4e-06 57.4 103 42.7
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 57.4 73 42.5
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 57.4 80 36.2
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-06 57.0 124 30.6
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-06 57.0 124 30.6
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-06 56.6 51 54.9
BolC7t44711H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-06 56.2 54 57.4
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-06 55.8 82 35.4
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-06 55.8 51 58.8
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-06 55.5 119 31.9
BcaC07g39596 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-06 55.5 55 49.1
BolC8t50369H Brassica oleracea HOM05D000313 ORTHO05D000065 5.5e-06 55.5 55 49.1
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 5.5e-06 55.5 66 50.0
BcaC03g16977 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-06 55.1 89 36.0
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-06 55.1 83 36.1
C02p16210 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-06 55.1 50 54.0
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 7.2e-06 55.1 89 36.0
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-06 55.1 81 37.0
BolC2t10974H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-06 55.1 89 36.0
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-06 54.7 67 49.3
C01p35450 Brassica napus HOM05D021655 ORTHO05D027572 9.4e-06 54.7 55 49.1
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-06 54.7 125 32.0
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 9.4e-06 54.7 82 34.1
BolC1t03503H Brassica oleracea HOM05D021655 ORTHO05D027572 9.4e-06 54.7 55 49.1
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-06 54.7 125 32.0


User provided reference genes

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