Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04157 Brassica carinata HOM05D009135 ORTHO05D011551 1.5e-110 402.9 206 100.0
BolC3t16714H Brassica oleracea HOM05D009135 ORTHO05D011551 1.5e-110 402.9 206 100.0
A03p36780 Brassica napus HOM05D009135 ORTHO05D011551 3.6e-101 371.7 203 93.1
BraA03t12840Z Brassica rapa HOM05D009135 ORTHO05D011551 3.6e-101 371.7 203 93.1
C03p45230 Brassica napus HOM05D009135 ORTHO05D011551 7.6e-99 364.0 203 90.6
BolC3t16787H Brassica oleracea HOM05D009135 ORTHO05D011551 7.6e-99 364.0 203 90.6
C03p44470 Brassica napus HOM05D009135 ORTHO05D011551 3.3e-78 295.4 159 95.0
BcaB04g18610 Brassica carinata HOM05D009135 ORTHO05D011551 9.7e-78 293.9 183 82.0
BolC3t16706H Brassica oleracea HOM05D009135 ORTHO05D011551 5.9e-67 258.1 204 70.6
C03p44360 Brassica napus HOM05D009135 ORTHO05D011551 1.0e-66 257.3 204 70.6
A03p56800 Brassica napus HOM05D009135 ORTHO05D011551 2.9e-66 255.8 204 70.6
BraA03t14750Z Brassica rapa HOM05D009135 ORTHO05D011551 3.8e-66 255.4 204 70.6
A03p37100 Brassica napus HOM05D009135 ORTHO05D011551 2.2e-58 229.6 183 71.6
BraA03t12872Z Brassica rapa HOM05D009135 ORTHO05D011551 5.0e-58 228.4 183 71.6
A03p36470 Brassica napus HOM05D009135 ORTHO05D011551 6.5e-58 228.0 188 69.1
BraA03t12814Z Brassica rapa HOM05D009135 ORTHO05D011551 4.2e-57 225.3 188 69.1
BcaC01g04166 Brassica carinata HOM05D009135 ORTHO05D011551 2.2e-50 203.0 213 59.6
Thhalv10022071m.g Eutrema salsugineum HOM05D009135 ORTHO05D011551 6.1e-48 194.9 161 68.9
Thhalv10022053m.g Eutrema salsugineum HOM05D009135 ORTHO05D011551 1.4e-47 193.7 155 69.0
Carub.0006s1552 Capsella rubella HOM05D009135 ORTHO05D011551 2.8e-45 186.0 208 52.4
AL3G25670 Arabidopsis lyrata HOM05D009135 ORTHO05D011551 1.8e-44 183.3 187 58.8
CARHR088400 Cardamine hirsuta HOM05D009135 ORTHO05D011551 1.8e-44 183.3 203 56.2
AT3G11060 Arabidopsis thaliana HOM05D009135 ORTHO05D011551 3.8e-42 175.6 198 53.0
BcaB04g18643 Brassica carinata HOM05D009135 ORTHO05D011551 1.9e-41 173.3 204 55.4
BcaC01g04081 Brassica carinata HOM05D009135 ORTHO05D011551 5.2e-39 165.2 93 89.2
AT3G06545 Arabidopsis thaliana HOM05D009135 ORTHO05D011551 6.3e-37 158.3 167 56.3
C03p44960 Brassica napus HOM05D009135 ORTHO05D011551 2.5e-33 146.4 90 82.2
BcaC01g04113 Brassica carinata HOM05D009135 ORTHO05D011551 3.3e-33 146.0 90 83.3
BolC3t16756H Brassica oleracea HOM05D009135 ORTHO05D011551 3.3e-33 146.0 90 83.3
Thhalv10022411m.g Eutrema salsugineum HOM05D009135 ORTHO05D011551 2.9e-26 122.9 141 56.7
BolC3t16708H Brassica oleracea HOM05D009135 ORTHO05D011551 1.3e-21 107.5 94 64.9
BNapus_Darmor_BZH_scaffold_273p00020 Brassica napus HOM05D009135 ORTHO05D098692 2.0e-14 83.6 42 100.0
C03p44640 Brassica napus HOM05D009135 ORTHO05D102747 2.6e-14 83.2 51 86.3
Carub.0003s0601 Capsella rubella HOM05D009135 ORTHO05D114511 7.3e-09 65.1 113 41.6


User provided reference genes

Program Settings