Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g04110 Brassica carinata HOM05D000493 ORTHO05D093459 1.0e-41 172.9 86 100.0
BcaB04g18645 Brassica carinata HOM05D000493 ORTHO05D001638 1.5e-24 115.9 118 58.5
AL3G23070 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 2.9e-12 75.1 121 47.1
Carub.0003s1084 Capsella rubella HOM05D000493 ORTHO05D001638 1.5e-11 72.8 71 60.6
BNapus_Darmor_BZH_scaffold_145p00140 Brassica napus HOM05D000493 ORTHO05D001638 2.8e-10 68.6 134 41.0
BraA01t04179Z Brassica rapa HOM05D000493 ORTHO05D001638 3.6e-10 68.2 138 39.9
Thhalv10020791m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 3.6e-10 68.2 73 64.4
Sp3g09760 Schrenkiella parvula HOM05D000493 ORTHO05D001638 4.7e-10 67.8 92 53.3
BcaC09g48176 Brassica carinata HOM05D000493 ORTHO05D001638 6.1e-10 67.4 144 39.6
AT3G11520 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 2.3e-09 65.5 78 52.6
BcaB04g21131 Brassica carinata HOM05D000493 ORTHO05D001638 2.0e-08 62.4 133 36.8
BcaB05g24910 Brassica carinata HOM05D000493 ORTHO05D018702 2.6e-08 62.0 60 55.0
CARHR086070 Cardamine hirsuta HOM05D000493 ORTHO05D001638 5.7e-08 60.8 157 38.9
THA.LOC104809968 Tarenaya hassleriana HOM05D000493 ORTHO05D001638 7.5e-08 60.5 103 45.6
BolC1t05311H Brassica oleracea HOM05D000493 ORTHO05D001638 1.3e-07 59.7 129 38.8
Sp6g36740 Schrenkiella parvula HOM05D000493 ORTHO05D001638 1.7e-07 59.3 50 62.0
Carub.0006s0503 Capsella rubella HOM05D000493 ORTHO05D001638 2.2e-07 58.9 48 62.5
AL6G16120 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 3.7e-07 58.2 48 62.5
Aa31LG11G7130 Aethionema arabicum HOM05D000493 ORTHO05D001638 6.3e-07 57.4 54 57.4
AT5G06150 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 8.3e-07 57.0 48 60.4
Thhalv10013556m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 1.1e-06 56.6 68 48.5
AT1G34460 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 1.4e-06 56.2 48 60.4
ECA240G1551 Erigeron canadensis HOM05D000493 ORTHO05D001638 1.4e-06 56.2 76 42.1
CARHR206860 Cardamine hirsuta HOM05D000493 ORTHO05D001638 1.8e-06 55.8 48 60.4
BraA02t04871Z Brassica rapa HOM05D000493 ORTHO05D001638 4.1e-06 54.7 48 58.3
BcaB04g17383 Brassica carinata HOM05D000493 ORTHO05D093237 5.4e-06 54.3 51 62.7
BcaB05g21681 Brassica carinata HOM05D000493 ORTHO05D005823 7.0e-06 53.9 47 57.4
C02p02600 Brassica napus HOM05D000493 ORTHO05D005823 7.0e-06 53.9 47 57.4
BolC2t06226H Brassica oleracea HOM05D000493 ORTHO05D005823 7.0e-06 53.9 47 57.4


User provided reference genes

Program Settings