Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 3568.5 1805 100.0
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 3542.3 1805 99.4
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 0.0e+00 3534.2 1806 99.2
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 0.0e+00 3517.2 1809 98.6
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 3513.8 1809 98.5
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 3480.6 1810 97.4
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 0.0e+00 3382.8 1810 94.3
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 0.0e+00 3357.0 1810 94.0
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 0.0e+00 3334.3 1812 93.0
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 0.0e+00 3333.1 1810 92.9
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 0.0e+00 3308.5 1812 92.5
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 0.0e+00 3287.3 1811 91.7
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 0.0e+00 3204.1 1811 89.3
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 0.0e+00 3033.0 1810 84.2
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 0.0e+00 2774.6 1815 76.2
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 0.0e+00 2694.1 1805 74.3
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 0.0e+00 2691.8 1818 74.3
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 0.0e+00 2682.9 1824 74.3
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 0.0e+00 2681.7 1818 73.7
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2677.1 1819 73.3
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 0.0e+00 2676.4 1825 73.8
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 0.0e+00 2674.8 1819 73.8
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 0.0e+00 2673.7 1767 75.8
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 0.0e+00 2667.1 1822 73.8
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2663.6 1820 73.3
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2660.2 1821 73.4
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2656.7 1821 73.3
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2656.7 1820 73.1
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2655.6 1818 73.4
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2653.2 1820 73.1
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 2651.7 1820 72.6
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 0.0e+00 2645.9 1818 72.8
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 0.0e+00 2644.8 1816 72.6
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2636.3 1818 72.6
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2631.7 1808 73.1
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 0.0e+00 2626.3 1821 72.9
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 0.0e+00 2625.1 1833 72.2
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 0.0e+00 2610.1 1836 72.0
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 0.0e+00 2605.9 1820 71.8
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 0.0e+00 2589.7 1817 71.7
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2586.6 1774 73.2
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 0.0e+00 2584.3 1821 72.4
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 0.0e+00 2576.6 1821 70.1
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 0.0e+00 2572.0 1930 68.8
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 0.0e+00 2569.3 1975 66.9
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2565.0 1818 70.3
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 0.0e+00 2565.0 1822 70.3
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 0.0e+00 2561.9 1816 70.5
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2558.9 1821 69.7
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2558.5 1822 69.9
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2558.5 1821 69.8
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2554.6 1857 70.5
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 0.0e+00 2552.3 1815 70.8
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 0.0e+00 2550.8 1812 70.9
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 0.0e+00 2545.8 1817 70.0
FvH4_3g41830 Fragaria vesca HOM05D004535 ORTHO05D005341 0.0e+00 2542.7 1758 72.5
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2542.7 1822 69.9
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 0.0e+00 2542.3 1817 69.9
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2539.6 1823 69.6
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 0.0e+00 2539.2 1812 69.8
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 0.0e+00 2533.4 1825 70.2
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2531.9 1821 69.0
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 0.0e+00 2529.6 1818 69.1
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 0.0e+00 2515.0 1812 70.1
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 0.0e+00 2506.5 1824 69.1
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2497.6 1676 75.0
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 0.0e+00 2492.6 1820 68.2
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 0.0e+00 2489.5 1818 68.5
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2489.1 1903 66.1
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 0.0e+00 2485.3 1814 68.3
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 0.0e+00 2476.4 1770 70.6
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2470.3 1815 68.2
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2468.0 1822 68.2
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2467.2 1809 68.3
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 0.0e+00 2466.0 1807 68.8
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2463.7 1834 67.4
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 0.0e+00 2452.6 1820 67.3
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2452.6 1803 68.7
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2442.2 1817 67.6
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2430.2 1844 66.7
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 0.0e+00 2416.7 1893 65.9
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 0.0e+00 2394.0 1833 67.2
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 0.0e+00 2376.3 1792 67.9
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2361.3 1824 65.6
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2357.0 1946 62.9
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 0.0e+00 2347.8 1837 64.5
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 0.0e+00 2344.7 1818 65.6
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2343.2 1857 64.1
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 0.0e+00 2340.5 1817 65.8
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2306.9 1908 63.5
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 0.0e+00 2274.2 1625 70.7
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 0.0e+00 2271.1 1828 62.9
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 0.0e+00 2269.2 1821 62.7
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2240.3 1654 69.5
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2232.2 1566 73.0
Cpa.g.sc12.80 Carica papaya HOM05D004535 ORTHO05D005341 0.0e+00 2113.6 1742 64.5
CiPaw.12G142100 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2101.2 1680 64.1
Ca_14867_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 0.0e+00 2077.0 1517 68.4
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 0.0e+00 2070.8 1815 57.3
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2040.0 1444 69.4
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 0.0e+00 1758.0 1449 62.6
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 1744.6 1253 70.6
Potri.011G167700 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 1706.8 1148 73.1
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 0.0e+00 1658.3 1811 50.6
Mapoly0071s0029 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1398.6 1936 41.2
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis HOM05D004535 ORTHO05D005341 0.0e+00 1386.7 1865 42.6
PGSC0003DMG401022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 0.0e+00 1376.3 945 71.3
Pp3c20_11540 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1372.5 1857 41.6
Mapoly0069s0005 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1331.2 1876 39.8
Pp3c15_5520 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1220.7 1834 38.7
SMO184G0002 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1202.2 1854 38.1
SMO340G0109 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1177.2 1826 37.6
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 0.0e+00 1157.9 863 68.9
SMO239G0001 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 7.2e-310 1068.1 1839 35.5
CAN.G623.64 Capsicum annuum HOM05D004535 ORTHO05D005341 2.9e-295 1019.6 947 58.5
Ca_14861_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 1.3e-290 1004.2 723 68.3
CBR_g24134 Chara braunii HOM05D004535 ORTHO05D005341 1.8e-273 947.2 1967 32.7
Os06g0301300 Oryza sativa ssp. japonica HOM05D004535 ORTHO05D005341 4.9e-250 869.4 693 60.6
COL.COLO4_07778 Corchorus olitorius HOM05D004535 ORTHO05D005341 1.9e-249 867.5 1169 46.4
Potri.011G167650 Populus trichocarpa HOM05D004535 ORTHO05D005341 2.9e-202 710.7 505 70.9
Actinidia00829 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.0e-162 579.3 625 54.9
SEGI_13123 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 3.3e-137 494.6 459 54.5
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 9.2e-132 476.5 637 45.2
MCO11G531 Micromonas commoda HOM05D004535 ORTHO05D005341 1.2e-128 466.1 1900 24.9
Ca_14860_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 1.1e-119 436.4 339 67.6
VMungo0540G1109 Vigna mungo HOM05D004535 ORTHO05D005341 8.1e-112 410.2 320 65.9
SEGI_38328 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 3.4e-110 404.8 466 47.6
Actinidia00827 Actinidia chinensis HOM05D004535 ORTHO05D005341 7.6e-102 377.1 301 62.5
MD00G1206600 Malus domestica HOM05D004535 ORTHO05D005341 1.9e-100 372.5 220 75.9
VMungo1127G2045 Vigna mungo HOM05D004535 ORTHO05D005341 8.7e-98 363.6 269 66.5
MD00G1206500 Malus domestica HOM05D004535 ORTHO05D005341 3.8e-93 348.2 250 72.8
PRCOL_00006556 Prasinoderma coloniale HOM05D004535 ORTHO05D005341 5.6e-89 334.3 1926 23.0
SEGI_32129 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 9.7e-81 307.0 359 51.8
Actinidia03668 Actinidia chinensis HOM05D004535 ORTHO05D005341 3.2e-76 292.0 225 60.9
Nn1g08306 Nelumbo nucifera HOM05D004535 ORTHO05D005341 5.3e-71 274.6 166 75.3
arahy.Tifrunner.gnm1.ann1.P6R29M Arachis hypogaea HOM05D004535 ORTHO05D005341 5.0e-69 268.1 345 47.2
Cpa.g.sc12.82 Carica papaya HOM05D004535 ORTHO05D005341 8.3e-40 171.0 100 87.0
Cfa027001 Carpinus fangiana HOM05D004535 ORTHO05D005341 2.5e-36 159.5 1990 19.3
SEGI_15666 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 4.2e-36 158.7 138 62.3
Cre14.g628702 Chlamydomonas reinhardtii HOM05D004535 ORTHO05D005341 8.0e-35 154.5 1332 20.9
Actinidia00828 Actinidia chinensis HOM05D004535 ORTHO05D005341 3.0e-34 152.5 210 44.8
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea HOM05D004535 ORTHO05D005341 8.6e-21 107.8 106 60.4
Ca_31034_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 1.9e-20 106.7 75 70.7
PSO541G1144 Papaver somniferum HOM05D004535 ORTHO05D005341 2.5e-20 106.3 76 64.5
Psat5g106440 Pisum sativum HOM05D004535 ORTHO05D005341 3.3e-20 105.9 65 83.1
Lsat_1_v5_gn_0_5420 Lactuca sativa HOM05D004535 ORTHO05D005341 6.8e-18 98.2 74 56.8
arahy.Tifrunner.gnm1.ann1.6S2B7N Arachis hypogaea HOM05D012221 ORTHO05D005341 1.3e-16 94.0 120 50.0
VMungo1215G1327 Vigna mungo HOM05D004535 ORTHO05D005341 1.7e-16 93.6 60 81.7
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea HOM05D004535 ORTHO05D005341 1.4e-15 90.5 110 52.7
PGSC0003DMG402022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 7.0e-15 88.2 96 50.0
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea HOM05D004535 ORTHO05D005341 2.3e-13 83.2 71 62.0
SEGI_18126 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 8.1e-11 74.7 73 38.4
VMungo0110G0001 Vigna mungo HOM05D004535 ORTHO05D005341 5.2e-10 72.0 68 52.9
Psat4g112520 Pisum sativum HOM05D004535 ORTHO05D005341 6.8e-10 71.6 45 66.7
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea HOM05D004535 ORTHO05D005341 1.4e-07 63.9 78 52.6
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 7.1e-07 61.6 75 50.7


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