Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03958 Brassica carinata HOM05D004368 ORTHO05D004990 3.5e-172 608.2 315 100.0
BolC3t16938H Brassica oleracea HOM05D004368 ORTHO05D004990 7.4e-170 600.5 324 97.2
C03p46730 Brassica napus HOM05D004368 ORTHO05D004990 1.9e-165 585.9 316 96.5
A03p38620 Brassica napus HOM05D004368 ORTHO05D004990 5.7e-162 574.3 315 96.2
BraA03t13009Z Brassica rapa HOM05D004368 ORTHO05D004990 1.0e-158 563.5 324 92.6
BcaB04g18818 Brassica carinata HOM05D004368 ORTHO05D004990 1.2e-143 513.5 320 87.2
C05p53530 Brassica napus HOM05D004368 ORTHO05D004990 2.2e-134 482.6 319 83.1
BolC5t34030H Brassica oleracea HOM05D004368 ORTHO05D004990 2.2e-134 482.6 319 83.1
A05p35340 Brassica napus HOM05D004368 ORTHO05D004990 6.5e-134 481.1 324 82.1
BraA05t22344Z Brassica rapa HOM05D004368 ORTHO05D004990 6.5e-134 481.1 324 82.1
CARHR088970 Cardamine hirsuta HOM05D004368 ORTHO05D004990 2.7e-132 475.7 322 79.8
AT3G14110 Arabidopsis thaliana HOM05D004368 ORTHO05D004990 5.2e-131 471.5 319 79.6
Sp3g12370 Schrenkiella parvula HOM05D004368 ORTHO05D004990 2.6e-130 469.2 330 79.1
Thhalv10021156m.g Eutrema salsugineum HOM05D004368 ORTHO05D004990 9.7e-130 467.2 322 79.8
Carub.0003s1372 Capsella rubella HOM05D004368 ORTHO05D004990 5.0e-126 454.9 316 77.8
BcaC05g29122 Brassica carinata HOM05D004368 ORTHO05D004990 3.6e-124 448.7 319 78.4
Aa31LG8G1340 Aethionema arabicum HOM05D004368 ORTHO05D004990 8.3e-113 411.0 325 72.9
AL3G26340 Arabidopsis lyrata HOM05D004368 ORTHO05D004990 2.5e-101 372.9 222 89.2
THA.LOC104822665 Tarenaya hassleriana HOM05D004368 ORTHO05D004990 5.4e-96 355.1 332 63.3
QL05p003761 Quercus lobata HOM05D004368 ORTHO05D004990 3.5e-95 352.4 322 63.0
Potri.001G166000 Populus trichocarpa HOM05D004368 ORTHO05D004990 7.3e-93 344.7 331 61.3
Ciclev10026090m.g Citrus clementina HOM05D004368 ORTHO05D004990 1.6e-92 343.6 340 58.8
Gorai.009G145200 Gossypium raimondii HOM05D004368 ORTHO05D004990 8.1e-92 341.3 227 79.3
Duzib160G0466 Durio zibethinus HOM05D004368 ORTHO05D004990 1.1e-91 340.9 332 60.2
Gohir.D05G141000 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.8e-91 340.1 227 78.9
Duzib235G0527 Durio zibethinus HOM05D004368 ORTHO05D004990 3.1e-91 339.3 241 75.1
Thecc.06G124200 Theobroma cacao HOM05D004368 ORTHO05D004990 3.1e-91 339.3 334 60.8
Gohir.A05G138800 Gossypium hirsutum HOM05D004368 ORTHO05D004990 4.0e-91 339.0 227 78.9
Manes.11G016500 Manihot esculenta HOM05D004368 ORTHO05D004990 4.0e-91 339.0 231 77.9
Ah.15g095150 Amaranthus hybridus HOM05D004368 ORTHO05D004990 5.2e-91 338.6 224 80.4
Sc15g0000580 Simmondsia chinensis HOM05D004368 ORTHO05D004990 8.9e-91 337.8 235 76.2
CAN.G1487.1 Capsicum annuum HOM05D004368 ORTHO05D004990 2.6e-90 336.3 233 76.4
MD09G1178400 Malus domestica HOM05D004368 ORTHO05D004990 2.6e-90 336.3 236 75.4
COL.COLO4_30792 Corchorus olitorius HOM05D004368 ORTHO05D004990 3.4e-90 335.9 243 74.5
MD17G1148400 Malus domestica HOM05D004368 ORTHO05D004990 3.4e-90 335.9 272 67.3
Cc06_g01580 Coffea canephora HOM05D004368 ORTHO05D004990 5.8e-90 335.1 229 78.6
Actinidia21803 Actinidia chinensis HOM05D004368 ORTHO05D004990 9.9e-90 334.3 224 78.6
Haze_16075 Corylus avellana HOM05D004368 ORTHO05D004990 9.9e-90 334.3 326 61.0
FvH4_6g35160 Fragaria vesca HOM05D004368 ORTHO05D004990 9.9e-90 334.3 231 78.4
CSS0030612 Camellia sinensis var. sinensis HOM05D004368 ORTHO05D004990 1.3e-89 334.0 227 76.7
CiPaw.01G216100 Carya illinoinensis HOM05D004368 ORTHO05D004990 1.3e-89 334.0 326 61.3
ClCG07G014470 Citrullus lanatus HOM05D004368 ORTHO05D004990 1.7e-89 333.6 317 62.8
Psat4g167320 Pisum sativum HOM05D004368 ORTHO05D004990 1.7e-89 333.6 321 61.4
Sed0018133 Sechium edule HOM05D004368 ORTHO05D004990 1.7e-89 333.6 322 61.2
FAN09G0342 Fragaria x ananassa HOM05D004368 ORTHO05D004990 3.7e-89 332.4 228 78.5
TWI23G0003 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 3.7e-89 332.4 223 77.6
Lj3g0026199 Lotus japonicus HOM05D004368 ORTHO05D004990 4.9e-89 332.0 227 78.4
RcHm_v2.0_Chr2g0146421 Rosa chinensis HOM05D004368 ORTHO05D004990 4.9e-89 332.0 315 61.3
Hma1.2p1_0414F.1_g147650 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 6.4e-89 331.6 258 69.0
Medtr8g022040 Medicago truncatula HOM05D004368 ORTHO05D004990 6.4e-89 331.6 315 60.6
TPR.G29997 Trifolium pratense HOM05D004368 ORTHO05D004990 6.4e-89 331.6 317 60.9
Actinidia32205 Actinidia chinensis HOM05D004368 ORTHO05D004990 8.3e-89 331.3 224 76.8
PGR119G1615 Punica granatum HOM05D004368 ORTHO05D004990 1.1e-88 330.9 232 75.0
Solyc09g072880.3 Solanum lycopersicum HOM05D004368 ORTHO05D004990 1.4e-88 330.5 233 75.1
CsaV3_3G030850 Cucumis sativus L. HOM05D000945 ORTHO05D000919 1.9e-88 330.1 232 76.3
TAR626G1097 Trochodendron aralioides HOM05D004368 ORTHO05D004990 1.9e-88 330.1 238 72.7
Cpa.g.sc25.148 Carica papaya HOM05D004368 ORTHO05D004990 2.4e-88 329.7 213 81.2
Nitab4.5_0003342g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 2.4e-88 329.7 234 75.2
PGSC0003DMG400003792 Solanum tuberosum HOM05D004368 ORTHO05D004990 2.4e-88 329.7 233 75.1
Sopen09g028680 Solanum pennellii HOM05D004368 ORTHO05D004990 3.2e-88 329.3 233 75.1
DCAR_022662 Daucus carota HOM05D004368 ORTHO05D004990 4.1e-88 328.9 222 78.8
Eucgr.F02457 Eucalyptus grandis HOM05D004368 ORTHO05D004990 4.1e-88 328.9 320 60.0
MBI02_g13231_MAGBIO Magnolia biondii HOM05D004368 ORTHO05D004990 4.1e-88 328.9 280 65.7
Peaxi162Scf00043g02929 Petunia axillaris HOM05D004368 ORTHO05D004990 4.1e-88 328.9 230 76.1
FAN02G3674 Fragaria x ananassa HOM05D004368 ORTHO05D004990 5.4e-88 328.6 232 76.3
FAN05G4100 Fragaria x ananassa HOM05D004368 ORTHO05D004990 5.4e-88 328.6 232 76.3
Sopen09g028700 Solanum pennellii HOM05D004368 ORTHO05D004990 7.1e-88 328.2 228 76.3
GSVIVG01016719001 Vitis vinifera HOM05D004368 ORTHO05D004990 9.2e-88 327.8 238 72.3
MELO3C022680.2 Cucumis melo HOM05D004368 ORTHO05D004990 1.2e-87 327.4 232 75.9
Lj5A32G57 Lonicera japonica HOM05D004368 ORTHO05D004990 2.1e-87 326.6 222 76.1
Nitab4.5_0000845g0110 Nicotiana tabacum HOM05D004368 ORTHO05D004990 2.1e-87 326.6 234 74.8
vmacro06407 Vaccinium macrocarpon HOM05D004368 ORTHO05D004990 2.1e-87 326.6 226 75.7
AUR62009921 Chenopodium quinoa HOM05D004368 ORTHO05D004990 3.5e-87 325.9 223 78.0
DCAR_016106 Daucus carota HOM05D004368 ORTHO05D004990 3.5e-87 325.9 222 77.0
Rhsim08G0241200 Rhododendron simsii HOM05D004368 ORTHO05D004990 7.8e-87 324.7 224 75.9
Hund18675 Selenicereus undatus HOM05D004368 ORTHO05D004990 1.0e-86 324.3 229 76.0
Gorai.010G235500 Gossypium raimondii HOM05D004368 ORTHO05D004990 1.3e-86 323.9 236 74.2
AUR62001444 Chenopodium quinoa HOM05D004368 ORTHO05D004990 2.3e-86 323.2 223 76.7
Lj9C535T4 Lonicera japonica HOM05D004368 ORTHO05D004990 3.0e-86 322.8 222 76.1
EL10Ac7g16443 Beta vulgaris HOM05D004368 ORTHO05D004990 3.9e-86 322.4 233 73.0
Gohir.D06G201700 Gossypium hirsutum HOM05D004368 ORTHO05D004990 3.9e-86 322.4 236 73.7
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.6e-86 321.6 338 57.1
Gohir.A06G193900 Gossypium hirsutum HOM05D004368 ORTHO05D004990 6.6e-86 321.6 328 58.5
TAR468G0014 Trochodendron aralioides HOM05D004368 ORTHO05D004990 6.6e-86 321.6 243 69.1
ATR0568G120 Amborella trichopoda HOM05D004368 ORTHO05D004990 1.1e-85 320.9 238 71.8
Ca_23409_v3 Cicer arietinum L. HOM05D004368 ORTHO05D004990 1.5e-85 320.5 266 67.7
Nn8g38578 Nelumbo nucifera HOM05D004368 ORTHO05D004990 3.3e-85 319.3 221 76.5
VMungo0540G1553 Vigna mungo HOM05D004368 ORTHO05D004990 3.3e-85 319.3 227 75.3
HanXRQChr15g0497161 Helianthus annuus HOM05D004368 ORTHO05D004990 4.3e-85 318.9 227 75.3
Hma1.2p1_0311F.1_g121230 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 7.3e-85 318.2 251 69.7
Glyma.07G041700 Glycine max HOM05D004368 ORTHO05D004990 1.6e-84 317.0 315 58.7
Lalb_Chr17g0343461 Lupinus albus HOM05D004368 ORTHO05D004990 1.6e-84 317.0 317 57.7
Phvul.006G206500 Phaseolus vulgaris HOM05D004368 ORTHO05D004990 1.6e-84 317.0 309 61.2
Peaxi162Scf01157g00111 Petunia axillaris HOM05D004368 ORTHO05D004990 2.8e-84 316.2 227 74.0
CAN.G941.28 Capsicum annuum HOM05D004368 ORTHO05D004990 3.6e-84 315.8 237 71.3
Glyma.16G010200 Glycine max HOM05D004368 ORTHO05D004990 6.2e-84 315.1 226 73.5
ECA247G3177 Erigeron canadensis HOM05D004368 ORTHO05D004990 1.1e-83 314.3 237 69.6
ECA248G3608 Erigeron canadensis HOM05D004368 ORTHO05D004990 8.9e-83 311.2 221 75.6
Sopen06g002970 Solanum pennellii HOM05D004368 ORTHO05D004990 8.9e-83 311.2 239 69.5
Solyc06g008160.4 Solanum lycopersicum HOM05D004368 ORTHO05D004990 3.4e-82 309.3 232 71.1
HPP92_003012 Vanilla planifolia HOM05D004368 ORTHO05D004990 3.4e-82 309.3 221 73.8
Aqoxy7G01007 Aquilegia oxysepala HOM05D004368 ORTHO05D004990 7.6e-82 308.1 228 72.4
unitig_27.g24839 Utricularia gibba HOM05D004368 ORTHO05D004990 4.9e-81 305.4 227 72.2
Lsat_1_v5_gn_4_91400 Lactuca sativa HOM05D004368 ORTHO05D004990 1.1e-80 304.3 230 72.6
unitig_27.g24862 Utricularia gibba HOM05D004368 ORTHO05D004990 1.1e-80 304.3 227 71.8
SalBow5G3644 Salvia bowleyana HOM05D004368 ORTHO05D004990 1.4e-80 303.9 221 73.8
Oeu064511.1 Olea europaea HOM05D004368 ORTHO05D004990 3.2e-80 302.8 213 75.6
SalBow5G0362 Salvia bowleyana HOM05D004368 ORTHO05D004990 7.1e-80 301.6 221 73.3
HanXRQChr09g0277121 Helianthus annuus HOM05D004368 ORTHO05D004990 9.2e-80 301.2 229 72.1
Sabra01G0127300 Salix brachista HOM05D004368 ORTHO05D004990 9.2e-80 301.2 315 58.4
Lalb_Chr04g0253731 Lupinus albus HOM05D004368 ORTHO05D004990 1.2e-79 300.8 219 71.7
unitig_699.g19383 Utricularia gibba HOM05D004368 ORTHO05D004990 1.7e-78 297.0 227 70.0
CANSAT56G3889 Cannabis sativa HOM05D004368 ORTHO05D004990 2.3e-78 296.6 232 69.4
Os01g0510600 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 2.3e-78 296.6 221 70.6
PSO724G0024 Papaver somniferum HOM05D004368 ORTHO05D004990 3.0e-78 296.2 261 61.7
PSO386G0078 Papaver somniferum HOM05D004368 ORTHO05D004990 3.9e-78 295.8 261 61.3
Migut.L01998 Erythranthe guttata HOM05D004368 ORTHO05D004990 2.5e-77 293.1 272 63.6
Zm00001eb308830 Zea mays HOM05D004368 ORTHO05D004990 1.2e-76 290.8 221 70.1
CDE04G0878 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 6.2e-76 288.5 218 70.6
CDE05G2024 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 1.8e-75 287.0 223 69.1
arahy.Tifrunner.gnm1.ann1.26KYL2 Arachis hypogaea HOM05D004368 ORTHO05D004990 2.2e-73 280.0 233 66.1
arahy.Tifrunner.gnm1.ann1.AFL61P Arachis hypogaea HOM05D004368 ORTHO05D004990 6.4e-73 278.5 178 79.8
Atru.chr1.4073 Acer truncatum HOM05D004368 ORTHO05D004990 8.4e-73 278.1 178 83.1
Nn6g35672 Nelumbo nucifera HOM05D004368 ORTHO05D004990 5.4e-72 275.4 224 68.8
Os02g0586800 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 5.1e-70 268.9 219 64.8
Gorai.004G102400 Gossypium raimondii HOM05D004368 ORTHO05D004990 4.8e-68 262.3 191 73.8
Nitab4.5_0006980g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 2.4e-67 260.0 170 80.0
Nitab4.5_0000326g0270 Nicotiana tabacum HOM05D004368 ORTHO05D004990 7.9e-63 245.0 167 77.2
Gorai.001G096600 Gossypium raimondii HOM05D004368 ORTHO05D004990 1.9e-61 240.4 215 64.2
Atru.chr1.4083 Acer truncatum HOM05D004368 ORTHO05D004990 3.3e-61 239.6 201 67.2
Gohir.D08G096333 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.6e-60 237.3 191 69.6
Gohir.D07G090325 Gossypium hirsutum HOM05D004368 ORTHO05D004990 3.1e-59 233.0 174 73.6
Dinv37846 Davidia involucrata HOM05D004368 ORTHO05D004990 9.0e-59 231.5 165 73.9
AagrBONN_evm.TU.Sc2ySwM_228.3011 Anthoceros agrestis HOM05D004368 ORTHO05D004990 2.2e-57 226.9 189 65.1
Mapoly0108s0002 Marchantia polymorpha HOM05D004368 ORTHO05D004990 2.9e-57 226.5 326 45.4
Mapoly0110s0050 Marchantia polymorpha HOM05D004368 ORTHO05D004990 2.9e-57 226.5 326 45.4
Dinv20409 Davidia involucrata HOM05D004368 ORTHO05D004990 3.2e-56 223.0 171 69.0
SGA_v2.0_scaffold110G31269 Striga asiatica HOM05D004368 ORTHO05D004990 4.2e-56 222.6 313 47.0
Prupe.3G037600 Prunus persica HOM05D004368 ORTHO05D004990 1.6e-55 220.7 170 70.6
FAN05G2230 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.0e-55 218.8 165 74.5
CDE05G2107 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 1.1e-53 214.5 222 57.2
HPP92_027544 Vanilla planifolia HOM05D004368 ORTHO05D004990 1.9e-53 213.8 160 73.1
CBR_g39266 Chara braunii HOM05D004368 ORTHO05D004990 7.6e-50 201.8 246 49.6
Pp3c11_3130 Physcomitrium patens HOM05D004368 ORTHO05D004990 1.7e-49 200.7 184 56.5
SMO141G0180 Selaginella moellendorffii HOM05D004368 ORTHO05D004990 3.0e-46 189.9 185 54.1
Zm00001eb245590 Zea mays HOM05D004368 ORTHO05D004990 5.7e-45 185.7 155 61.3
Rhsim03G0211800 Rhododendron simsii HOM05D004368 ORTHO05D004990 1.3e-41 174.5 236 46.2
Cre10.g460050 Chlamydomonas reinhardtii HOM05D004368 ORTHO05D004990 2.3e-30 137.1 258 35.3
TWI14G0995 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 5.7e-29 132.5 346 32.4
PGSC0003DMG400014712 Solanum tuberosum HOM05D004368 ORTHO05D004990 8.5e-25 118.6 68 83.8
PRCOL_00003238 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 7.4e-21 105.5 226 33.2
BcaB04g18771 Brassica carinata HOM05D004368 ORTHO05D004990 6.3e-20 102.4 85 67.1
MCO11G340 Micromonas commoda HOM05D004368 ORTHO05D004990 5.3e-19 99.4 194 35.6
MCO14G328 Micromonas commoda HOM05D004368 ORTHO05D004990 5.0e-17 92.8 235 33.2
PRCOL_00003077 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 1.0e-14 85.1 224 32.1
SGA_v2.0_scaffold382G50397 Striga asiatica HOM05D004368 ORTHO05D004990 1.3e-09 68.2 42 71.4
TAR624G0904 Trochodendron aralioides HOM05D004368 ORTHO05D004990 1.3e-09 68.2 46 73.9
CBR_g29854 Chara braunii HOM05D004368 ORTHO05D004990 2.2e-09 67.4 51 66.7
MCO15G457 Micromonas commoda HOM05D004368 ORTHO05D268172 8.5e-09 65.5 182 29.7
TAR624G0589 Trochodendron aralioides HOM05D004368 ORTHO05D004990 2.5e-08 63.9 43 72.1
RcHm_v2.0_Chr5g0074611 Rosa chinensis HOM05D004368 ORTHO05D004990 1.2e-07 61.6 59 55.9


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