Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03923 Brassica carinata HOM05D002776 ORTHO05D003542 4.8e-120 434.5 215 100.0
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 8.1e-35 151.4 100 82.0
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 8.1e-35 151.4 100 82.0
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 8.1e-35 151.4 100 82.0
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 8.1e-35 151.4 100 82.0
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 2.3e-34 149.8 100 81.0
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 2.3e-34 149.8 100 81.0
C01p44940 Brassica napus HOM05D002776 ORTHO05D003044 3.1e-34 149.4 100 81.0
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 3.1e-34 149.4 100 81.0
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 3.1e-34 149.4 100 81.0
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 4.0e-34 149.1 100 81.0
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 4.0e-34 149.1 100 81.0
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 6.8e-34 148.3 100 80.0
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 6.8e-34 148.3 100 81.0
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 6.8e-34 148.3 100 80.0
BcaC05g27518 Brassica carinata HOM05D002776 ORTHO05D000395 1.2e-33 147.5 100 81.0
C03p80440 Brassica napus HOM05D002776 ORTHO05D011320 1.2e-33 147.5 100 80.0
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 1.2e-33 147.5 100 81.0
BcaC09g50108 Brassica carinata HOM05D002776 ORTHO05D011320 1.5e-33 147.1 100 80.0
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 2.0e-33 146.7 100 79.0
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 4.4e-33 145.6 100 79.0
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 5.8e-33 145.2 98 80.6
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 7.6e-33 144.8 100 80.0
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 1.3e-32 144.1 100 80.0
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-32 143.7 98 79.6
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 4.9e-32 142.1 100 78.0
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 4.9e-32 142.1 100 77.0
BolC3t17909H Brassica oleracea HOM05D002776 ORTHO05D003044 1.1e-31 141.0 99 79.8
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 4.1e-31 139.0 98 78.6
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 4.1e-31 139.0 106 74.5
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 9.2e-31 137.9 100 78.0
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 2.7e-30 136.3 100 77.0
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 3.5e-30 136.0 100 76.0
A08p06070 Brassica napus HOM05D002776 ORTHO05D011320 3.5e-30 136.0 100 77.0
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 3.5e-30 136.0 117 68.4
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 7.8e-30 134.8 100 76.0
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 1.0e-29 134.4 100 76.0
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 1.0e-29 134.4 98 77.6
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 1.3e-29 134.0 100 75.0
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 1.7e-29 133.7 100 75.0
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 1.7e-29 133.7 100 75.0
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 1.1e-28 131.0 97 71.1
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 1.9e-28 130.2 100 74.0
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 1.6e-27 127.1 100 72.0
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 2.1e-27 126.7 79 77.2
BcaC02g09113 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-26 124.4 85 70.6
BcaC08g44372 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-26 124.4 85 70.6
BcaC09g48966 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-26 124.4 85 70.6
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-26 124.4 63 88.9
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-26 124.4 63 87.3
BolC2t11289H Brassica oleracea HOM05D002776 ORTHO05D003044 1.1e-26 124.4 63 88.9
BolC6t37506H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-26 124.4 63 88.9
BcaC08g44057 Brassica carinata HOM05D001224 ORTHO05D003542 1.8e-26 123.6 63 87.3
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 3.1e-26 122.9 80 72.5
C03p44580 Brassica napus HOM05D002776 ORTHO05D003044 6.9e-26 121.7 86 68.6
BcaC03g14316 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-26 121.3 98 67.3
BcaC06g33589 Brassica carinata HOM05D002776 ORTHO05D003542 1.5e-25 120.6 88 71.6
C07p49100 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-25 120.6 94 63.8
BolC6t37490H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-25 120.6 63 87.3
BolC8t49068H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-25 120.6 63 87.3
BolC3t17910H Brassica oleracea HOM05D001224 ORTHO05D003542 2.0e-25 120.2 58 93.1
C01p30530 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-25 119.8 94 63.8
BcaC02g09777 Brassica carinata HOM05D001224 ORTHO05D003542 3.4e-25 119.4 63 84.1
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 3.4e-25 119.4 85 67.1
BraA10t42919Z Brassica rapa HOM05D001224 ORTHO05D003542 4.4e-25 119.0 72 77.8
C07p30720 Brassica napus HOM05D001224 ORTHO05D003542 5.8e-25 118.6 94 61.7
BraA07t28348Z Brassica rapa HOM05D001224 ORTHO05D003542 5.8e-25 118.6 71 80.3
BcaB04g18313 Brassica carinata HOM05D001224 ORTHO05D003542 7.6e-25 118.2 63 82.5
C01p38690 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-24 117.5 73 76.7
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-24 117.1 98 70.4
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 2.9e-24 116.3 79 77.2
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 4.9e-24 115.5 76 72.4
BolC7t45418H Brassica oleracea HOM05D001224 ORTHO05D003542 4.9e-24 115.5 93 63.4
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 6.4e-24 115.2 94 61.7
C03p65990 Brassica napus HOM05D001224 ORTHO05D003542 8.4e-24 114.8 76 72.4
A03p65930 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-23 114.4 54 94.4
BcaB03g16496 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-23 114.0 63 79.4
C04p21370 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-23 114.0 94 61.7
C09p27480 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-23 114.0 94 61.7
BolC3t18910H Brassica oleracea HOM05D001224 ORTHO05D003542 1.4e-23 114.0 58 89.7
BolC6t36735H Brassica oleracea HOM05D001224 ORTHO05D003542 1.4e-23 114.0 94 61.7
BcaC07g39107 Brassica carinata HOM05D001224 ORTHO05D003542 1.9e-23 113.6 55 90.9
A08p09950 Brassica napus HOM05D001224 ORTHO05D003542 4.2e-23 112.5 54 92.6
BolC3t19483H Brassica oleracea HOM05D001224 ORTHO05D003542 4.2e-23 112.5 91 62.6
BraA08t32989Z Brassica rapa HOM05D001224 ORTHO05D003542 4.2e-23 112.5 54 92.6
BolC4t25126H Brassica oleracea HOM05D001224 ORTHO05D003542 5.4e-23 112.1 53 92.5
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 7.1e-23 111.7 99 65.7
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 7.1e-23 111.7 99 65.7
C09p28480 Brassica napus HOM05D001224 ORTHO05D003542 7.1e-23 111.7 94 60.6
C07p01240 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-23 111.3 119 51.3
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-23 111.3 133 48.9
C02p53510 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-22 110.9 94 60.6
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-22 110.5 71 71.8
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 3.5e-22 109.4 54 90.7
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 6.0e-22 108.6 52 96.2
C04p41850 Brassica napus HOM05D001224 ORTHO05D003542 6.0e-22 108.6 133 46.6
BcaB01g01308 Brassica carinata HOM05D001224 ORTHO05D003542 7.8e-22 108.2 63 76.2
BcaB06g26818 Brassica carinata HOM05D001224 ORTHO05D003542 1.0e-21 107.8 85 60.0
BcaC08g43735 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-21 107.1 57 87.7
BcaC05g25874 Brassica carinata HOM05D002776 ORTHO05D003044 2.3e-21 106.7 57 87.7
BolC3t18859H Brassica oleracea HOM05D001224 ORTHO05D003542 3.0e-21 106.3 72 70.8
BolC9t57316H Brassica oleracea HOM05D001224 ORTHO05D003542 6.6e-21 105.1 76 67.1
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 8.7e-21 104.8 88 70.5
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-20 104.4 67 73.1
BolC7t43617H Brassica oleracea HOM05D001224 ORTHO05D003542 9.6e-20 101.3 114 50.0
A07p02040 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-18 97.4 53 84.9
BcaB07g33756 Brassica carinata HOM05D001498 ORTHO05D003542 1.5e-17 94.0 78 56.4
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 2.6e-17 93.2 71 76.1
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 3.8e-16 89.4 52 84.6
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 4.9e-16 89.0 52 84.6
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 4.9e-16 89.0 52 84.6
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 4.9e-16 89.0 52 84.6
BcaB01g02123 Brassica carinata HOM05D002776 ORTHO05D094509 1.9e-15 87.0 52 82.7
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 1.9e-15 87.0 52 82.7
BolC7t41301H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-15 87.0 63 61.9
BcaB01g01817 Brassica carinata HOM05D002776 ORTHO05D003044 7.1e-15 85.1 52 82.7
BcaC05g26787 Brassica carinata HOM05D002776 ORTHO05D011320 7.1e-15 85.1 52 82.7
C07p08890 Brassica napus HOM05D001224 ORTHO05D003542 7.1e-15 85.1 63 60.3
BcaB01g03188 Brassica carinata HOM05D002776 ORTHO05D003044 9.3e-15 84.7 52 80.8
BcaC06g36018 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-14 84.3 63 60.3
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 2.1e-14 83.6 62 71.0
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 3.5e-14 82.8 52 78.8
C01p34330 Brassica napus HOM05D001224 ORTHO05D023838 1.8e-13 80.5 63 57.1
BolC1t03403H Brassica oleracea HOM05D001224 ORTHO05D023838 1.8e-13 80.5 63 57.1
C03p56220 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-12 77.0 38 89.5
BolC8t49418H Brassica oleracea HOM05D001224 ORTHO05D032161 1.9e-12 77.0 34 97.1
C07p12900 Brassica napus HOM05D001224 ORTHO05D003542 3.3e-12 76.3 63 57.1
BcaB01g01478 Brassica carinata HOM05D001224 ORTHO05D003542 4.3e-12 75.9 57 52.6
BolC1t04862H Brassica oleracea HOM05D001224 ORTHO05D032161 4.3e-12 75.9 34 97.1
BolC8t47732H Brassica oleracea HOM05D001224 ORTHO05D003542 1.6e-11 73.9 50 68.0
BcaB03g16196 Brassica carinata HOM05D002776 ORTHO05D092087 2.8e-11 73.2 47 76.6
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 2.8e-11 73.2 59 72.9
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-10 71.2 59 71.2
C07p30710 Brassica napus HOM05D002776 ORTHO05D042973 1.8e-10 70.5 59 71.2
BcaB02g11462 Brassica carinata HOM05D001224 ORTHO05D003542 2.4e-10 70.1 56 58.9
BraA04t16781Z Brassica rapa HOM05D001224 ORTHO05D023838 2.4e-10 70.1 63 52.4
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-09 67.4 65 47.7
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-09 67.4 59 67.8
C03p71060 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-09 67.4 63 47.6
BolC3t19389H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-09 67.4 63 47.6
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 1.5e-09 67.4 59 67.8
BcaC08g43733 Brassica carinata HOM05D001224 ORTHO05D032161 2.0e-09 67.0 29 96.6
BcaB04g16981 Brassica carinata HOM05D001224 ORTHO05D003542 5.8e-09 65.5 67 47.8
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-09 65.5 65 46.2
BolC7t40543H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-09 65.5 50 64.0
BolC9t57424H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-09 65.5 63 46.0
BcaC02g09035 Brassica carinata HOM05D001224 ORTHO05D003542 1.3e-08 64.3 55 52.7
BcaC06g35970 Brassica carinata HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
A01p26300 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
A03p54390 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
A10p06840 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
BolC7t41036H Brassica oleracea HOM05D001224 ORTHO05D003542 1.7e-08 63.9 63 46.0
BolC8t49591H Brassica oleracea HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
BraA03t14504Z Brassica rapa HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 1.7e-08 63.9 55 52.7
BcaC02g11932 Brassica carinata HOM05D001224 ORTHO05D003542 2.2e-08 63.5 56 50.0
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 2.2e-08 63.5 55 52.7
BolC6t36796H Brassica oleracea HOM05D001224 ORTHO05D003542 2.2e-08 63.5 65 44.6
BraA03t14508Z Brassica rapa HOM05D002776 ORTHO05D107841 3.8e-08 62.8 57 66.7
BraA09t40148Z Brassica rapa HOM05D001224 ORTHO05D003542 3.8e-08 62.8 65 46.2
BcaC05g28168 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-07 61.2 55 50.9
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-07 61.2 55 50.9
BolC5t32335H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-07 61.2 55 50.9
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-07 60.8 55 50.9
C04p09750 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-07 60.8 152 30.9
BraA10t42920Z Brassica rapa HOM05D001224 ORTHO05D003542 1.4e-07 60.8 55 50.9
BraA01t03051Z Brassica rapa HOM05D002776 ORTHO05D003044 3.2e-07 59.7 56 62.5
C05p25300 Brassica napus HOM05D001224 ORTHO05D003542 4.2e-07 59.3 91 35.2
BolC4t22583H Brassica oleracea HOM05D001224 ORTHO05D003542 4.2e-07 59.3 152 30.9
BolC5t31267H Brassica oleracea HOM05D001224 ORTHO05D003542 4.2e-07 59.3 91 35.2
BolC6t38483H Brassica oleracea HOM05D001224 ORTHO05D003542 4.2e-07 59.3 61 39.3
BcaB02g11181 Brassica carinata HOM05D001224 ORTHO05D003542 5.5e-07 58.9 51 51.0
BolC3t20360H Brassica oleracea HOM05D001224 ORTHO05D003542 7.1e-07 58.5 55 49.1
BraA03t14506Z Brassica rapa HOM05D001224 ORTHO05D003542 9.3e-07 58.2 28 92.9
BcaC06g35983 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-06 57.8 47 55.3
BolC4t23824H Brassica oleracea HOM05D001224 ORTHO05D003542 1.2e-06 57.8 129 32.6
C06p05150 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-06 57.4 55 38.2
BolC9t57422H Brassica oleracea HOM05D001224 ORTHO05D003542 3.5e-06 56.2 51 43.1
BolC5t31446H Brassica oleracea HOM05D001224 ORTHO05D003542 6.0e-06 55.5 46 54.3
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 7.9e-06 55.1 98 42.9


User provided reference genes

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