Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03921 Brassica carinata HOM05D000589 ORTHO05D040045 1.0e-34 149.4 72 100.0
BolC3t18711H Brassica oleracea HOM05D000589 ORTHO05D040045 4.0e-31 137.5 73 94.5
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 4.2e-28 127.5 62 96.8
BolC6t36239H Brassica oleracea HOM05D000589 ORTHO05D001885 9.3e-28 126.3 64 95.3
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.2e-27 125.9 62 96.8
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-27 125.9 62 96.8
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-26 122.5 62 95.2
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-26 122.5 62 95.2
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 3.0e-26 121.3 62 93.5
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 5.1e-26 120.6 62 93.5
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 6.7e-26 120.2 62 93.5
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 1.5e-25 119.0 62 91.9
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 3.3e-25 117.9 62 90.3
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 7.4e-25 116.7 62 91.9
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 7.4e-25 116.7 62 91.9
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 9.6e-25 116.3 62 88.7
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 1.6e-24 115.5 62 88.7
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-23 112.1 55 98.2
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-22 108.6 55 96.4
C03p80460 Brassica napus HOM05D000589 ORTHO05D001885 3.4e-22 107.8 53 96.2
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.4e-22 107.8 53 96.2
BcaB01g01311 Brassica carinata HOM05D000589 ORTHO05D001885 7.6e-22 106.7 62 85.5
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 1.0e-21 106.3 62 83.9
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 2.2e-21 105.1 52 96.2
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.2e-21 105.1 52 96.2
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.9e-20 102.1 53 92.5
BraA03t15289Z Brassica rapa HOM05D000589 ORTHO05D001885 1.8e-18 95.5 52 90.4
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 5.1e-18 94.0 57 82.5
BcaC03g16729 Brassica carinata HOM05D000589 ORTHO05D004260 9.7e-17 89.7 62 72.6
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-17 89.7 64 71.9
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-17 89.7 62 72.6
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-16 89.4 62 71.0
BcaNung04078 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-15 86.3 62 67.7
BcaB06g28242 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-15 85.9 62 67.7
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-15 85.9 64 71.9
BcaB06g26956 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-15 85.5 64 68.8
BcaC09g51130 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-15 85.5 60 75.0
BcaC05g25328 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-15 85.1 64 68.8
BcaB05g22907 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-15 84.7 64 67.2
BcaC02g08299 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-15 84.7 58 77.6
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 9.0e-15 83.2 62 67.7
BcaC01g02505 Brassica carinata HOM05D001498 ORTHO05D001885 2.6e-14 81.6 41 95.1
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 5.9e-14 80.5 62 66.1
BcaC04g22355 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-13 79.7 62 59.7
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-13 79.3 62 66.1
BcaC07g38282 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-13 79.0 62 66.1
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-13 78.2 62 62.9
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 2.9e-13 78.2 64 65.6
BcaB03g15491 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-13 77.4 62 64.5
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-13 77.4 61 63.9
BcaC06g34173 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-13 77.4 61 63.9
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-13 77.4 61 63.9
BcaB01g01573 Brassica carinata HOM05D000589 ORTHO05D001885 8.5e-13 76.6 64 67.2
BcaC06g33723 Brassica carinata HOM05D000589 ORTHO05D001885 8.5e-13 76.6 64 67.2
BcaB02g09875 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-12 76.3 62 66.1
BcaB05g24472 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-12 76.3 64 67.2
BcaB05g21802 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-12 75.9 62 62.9
BcaB06g26227 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-12 75.9 62 64.5
BcaC05g28209 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-12 75.9 64 64.1
BcaC01g05797 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-12 75.5 62 64.5
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-12 75.1 61 63.9
BcaB03g15329 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-12 74.7 62 58.1
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-12 74.7 62 66.1
BcaC05g25870 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-12 74.7 64 60.9
BcaC05g25264 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-12 74.3 62 62.9
BcaC08g45585 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-12 74.3 53 69.8
BcaC09g48394 Brassica carinata HOM05D000589 ORTHO05D001885 5.5e-12 73.9 62 58.1
BcaB02g07279 Brassica carinata HOM05D000589 ORTHO05D001885 7.2e-12 73.6 66 63.6
BcaC07g38195 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-11 72.8 62 61.3
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-11 72.8 62 61.3
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-11 72.8 62 61.3
BcaB01g01446 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-11 72.4 62 59.7
BcaB01g02139 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-11 72.4 62 59.7
BcaB06g25896 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-11 72.4 62 58.1
BcaC02g08929 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-11 72.4 64 62.5
BcaB08g36271 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-11 72.0 63 63.5
BcaC03g15149 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-11 72.0 61 62.3
BcaC04g19792 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-11 72.0 64 60.9
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-11 71.6 58 65.5
BcaC08g45829 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-11 71.6 62 61.3
BcaC02g11766 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-11 71.2 61 62.3
BcaC08g42891 Brassica carinata HOM05D000044 ORTHO05D002654 3.6e-11 71.2 55 65.5
BcaB02g07830 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-11 70.9 65 58.5
BcaB04g18988 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-11 70.9 58 63.8
BcaC02g08655 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-11 70.9 62 62.9
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-11 70.9 62 59.7
BcaC04g20928 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-11 70.9 62 62.9
BcaC07g38292 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-11 70.9 65 58.5
BolC6t38390H Brassica oleracea HOM05D000589 ORTHO05D000401 6.1e-11 70.5 57 64.9
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 6.1e-11 70.5 62 61.3
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 7.9e-11 70.1 62 59.7
BcaB04g20434 Brassica carinata HOM05D000589 ORTHO05D001885 7.9e-11 70.1 62 58.1
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 7.9e-11 70.1 57 64.9
BcaB01g02011 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-10 69.7 62 59.7
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-10 69.7 62 59.7
BcaB07g33413 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-10 69.7 57 64.9
BcaC03g18153 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-10 69.7 62 59.7
BcaB06g25421 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-10 69.3 62 56.5
BcaB08g34473 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-10 69.3 62 59.7
BcaC01g05146 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-10 69.3 62 59.7
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-10 69.3 56 66.1
BcaB02g11539 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-10 68.9 57 64.9
BcaB04g17413 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-10 68.9 57 64.9
BcaC02g08590 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-10 68.6 64 59.4
BolC8t49278H Brassica oleracea HOM05D000589 ORTHO05D001885 2.3e-10 68.6 58 63.8
BolC1t02335H Brassica oleracea HOM05D000589 ORTHO05D001885 3.0e-10 68.2 62 59.7
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-10 67.8 69 56.5
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-10 67.8 58 62.1
BcaB01g01135 Brassica carinata HOM05D000589 ORTHO05D001885 5.1e-10 67.4 57 63.2
BcaB01g05554 Brassica carinata HOM05D000589 ORTHO05D001885 5.1e-10 67.4 59 62.7
BcaB02g07029 Brassica carinata HOM05D000589 ORTHO05D001885 5.1e-10 67.4 56 62.5
BcaB02g11474 Brassica carinata HOM05D000589 ORTHO05D013242 5.1e-10 67.4 55 63.6
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 5.1e-10 67.4 62 59.7
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 5.1e-10 67.4 59 62.7
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 5.1e-10 67.4 59 62.7
BcaB05g24213 Brassica carinata HOM05D000589 ORTHO05D001885 8.8e-10 66.6 62 56.5
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 8.8e-10 66.6 62 58.1
BraA09t40146Z Brassica rapa HOM05D000589 ORTHO05D001885 8.8e-10 66.6 33 87.9
BcaC03g15667 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-09 66.2 59 59.3
BcaC05g25949 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-09 66.2 62 58.1
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-09 66.2 53 62.3
BcaB06g27723 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-09 65.9 58 58.6
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-09 65.5 58 60.3
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.0e-09 65.5 52 63.5
BcaC02g08679 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-09 65.1 54 63.0
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-09 64.7 62 58.1
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-09 64.7 62 58.1
BcaC09g50125 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-09 64.7 62 61.3
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-09 64.7 62 61.3
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-09 64.7 55 60.0
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 3.3e-09 64.7 58 58.6
BcaC04g19451 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-09 64.3 62 56.5
BcaC06g32032 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-09 64.3 62 56.5
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-09 63.9 58 58.6
BcaB06g27778 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-09 63.9 66 56.1
BcaC04g18907 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-09 63.9 57 59.6
BcaC06g34714 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-09 63.9 74 48.6
BcaB02g10869 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-09 63.5 60 58.3
BcaB03g13920 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-09 63.5 62 58.1
BcaB05g22699 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-09 63.5 57 61.4
BcaC01g01963 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-09 63.5 57 57.9
BcaC04g22143 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-09 63.2 58 55.2
BcaC07g40780 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-09 63.2 62 58.1
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 9.7e-09 63.2 58 56.9
BcaC03g16344 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-08 62.8 62 56.5
BcaB03g14285 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-08 62.4 53 60.4
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 1.7e-08 62.4 62 56.5
BolC1t04845H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-08 62.0 81 45.7
BcaC04g22653 Brassica carinata HOM05D000589 ORTHO05D016749 2.8e-08 61.6 57 59.6
BcaC09g48963 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-08 61.6 62 54.8
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-08 61.6 62 53.2
BcaB01g04884 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-08 61.2 57 59.6
BcaC03g18011 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-08 61.2 47 66.0
BcaC06g35383 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-08 61.2 62 56.5
BcaC08g45067 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-08 60.8 58 60.3
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 6.3e-08 60.5 62 54.8
BcaC06g35854 Brassica carinata HOM05D002078 ORTHO05D010191 1.1e-07 59.7 57 59.6
BcaC01g00898 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-07 59.3 56 55.4
BcaC06g35166 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-07 59.3 56 55.4
BcaC08g46754 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-07 58.5 55 56.4
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 4.1e-07 57.8 58 55.2
BcaC06g33599 Brassica carinata HOM05D000589 ORTHO05D001885 5.3e-07 57.4 57 52.6
BcaB01g01593 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-07 57.0 61 55.7
BcaC04g22510 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-07 57.0 54 53.7
BolC8t48988H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-06 56.2 54 55.6
BcaB06g25993 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-06 55.8 62 53.2
BcaC03g14924 Brassica carinata HOM05D043229 ORTHO05D001885 1.5e-06 55.8 61 55.7
BcaC03g18339 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-06 55.8 52 53.8
BcaNung01371 Brassica carinata HOM05D000589 ORTHO05D039362 1.5e-06 55.8 58 56.9
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 2.0e-06 55.5 58 55.2
BolC3t12574H Brassica oleracea HOM05D000589 ORTHO05D001885 2.6e-06 55.1 74 47.3
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 2.6e-06 55.1 62 50.0
BolC4t22259H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-06 54.7 62 46.8
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 3.4e-06 54.7 74 45.9
A09p34640 Brassica napus HOM05D000589 ORTHO05D001885 4.5e-06 54.3 55 60.0
BcaNung06643 Brassica carinata HOM05D000589 ORTHO05D094827 5.9e-06 53.9 76 43.4
BolC7t42760H Brassica oleracea HOM05D000589 ORTHO05D001885 5.9e-06 53.9 33 72.7
Carub.0007s3076 Capsella rubella HOM05D000589 ORTHO05D001885 5.9e-06 53.9 77 41.6
BcaC05g29611 Brassica carinata HOM05D000589 ORTHO05D000401 7.7e-06 53.5 70 48.6
BolC3t19856H Brassica oleracea HOM05D000589 ORTHO05D000401 7.7e-06 53.5 67 49.3


User provided reference genes

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