Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03884 Brassica carinata HOM05D019280 ORTHO05D020041 4.1e-122 441.4 224 100.0
BolC4t25258H Brassica oleracea HOM05D019280 ORTHO05D020041 3.0e-40 169.5 91 96.7
BraA02t06167Z Brassica rapa HOM05D019280 ORTHO05D020041 6.3e-22 108.6 80 75.0
A02p16820 Brassica napus HOM05D019280 ORTHO05D020041 3.3e-15 86.3 80 67.5
A04p00910 Brassica napus HOM05D019280 ORTHO05D020041 3.3e-15 86.3 80 67.5
BraA04t16543Z Brassica rapa HOM05D019280 ORTHO05D020041 3.3e-15 86.3 80 67.5
Thhalv10011171m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 5.9e-12 75.5 78 61.5
Thhalv10011172m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 5.9e-12 75.5 78 61.5
AT1G55860 Arabidopsis thaliana HOM05D000747 ORTHO05D001683 8.5e-11 71.6 78 59.0
BcaB05g23932 Brassica carinata HOM05D000747 ORTHO05D001683 1.1e-10 71.2 78 59.0
Carub.0001s4443 Capsella rubella HOM05D000747 ORTHO05D001683 1.1e-10 71.2 78 60.3
Sp1g41460 Schrenkiella parvula HOM05D000747 ORTHO05D001683 1.1e-10 71.2 78 60.3
CARHR045560 Cardamine hirsuta HOM05D000747 ORTHO05D001683 7.2e-10 68.6 78 57.7
BraSC56t46399Z Brassica rapa HOM05D000747 ORTHO05D001683 1.2e-09 67.8 83 54.2
AL1G63980 Arabidopsis lyrata HOM05D000747 ORTHO05D001683 1.6e-09 67.4 63 63.5
Aa31LG10G330 Aethionema arabicum HOM05D000747 ORTHO05D001683 6.1e-09 65.5 81 56.8
AT1G70320 Arabidopsis thaliana HOM05D000747 ORTHO05D001683 3.9e-08 62.8 63 60.3
THA.LOC104815693 Tarenaya hassleriana HOM05D000747 ORTHO05D001683 5.1e-08 62.4 120 41.7
Thecc.07G012100 Theobroma cacao HOM05D000747 ORTHO05D001683 1.1e-07 61.2 121 43.0
COL.COLO4_09844 Corchorus olitorius HOM05D000747 ORTHO05D001683 2.0e-07 60.5 121 42.1
THA.LOC104822729 Tarenaya hassleriana HOM05D000747 ORTHO05D001683 7.4e-07 58.5 113 40.7
Oeu005482.1 Olea europaea HOM05D000747 ORTHO05D001683 9.7e-07 58.2 58 58.6
Duzib268G0898 Durio zibethinus HOM05D000747 ORTHO05D001683 1.3e-06 57.8 121 41.3
Dinv10345 Davidia involucrata HOM05D000747 ORTHO05D001683 2.2e-06 57.0 60 56.7
TAR626G0075 Trochodendron aralioides HOM05D000747 ORTHO05D001683 2.8e-06 56.6 130 35.4
QL08p003927 Quercus lobata HOM05D000747 ORTHO05D001683 3.7e-06 56.2 118 39.8
Ciclev10007219m.g Citrus clementina HOM05D000747 ORTHO05D001683 4.8e-06 55.8 63 54.0
DCAR_017075 Daucus carota HOM05D000747 ORTHO05D001683 4.8e-06 55.8 135 37.0
Dinv40863 Davidia involucrata HOM05D000747 ORTHO05D001683 4.8e-06 55.8 124 39.5
PGR083G1157 Punica granatum HOM05D000747 ORTHO05D001683 4.8e-06 55.8 62 54.8
Atru.chr2.3699 Acer truncatum HOM05D000747 ORTHO05D001683 6.3e-06 55.5 116 37.9
ECA240G4674 Erigeron canadensis HOM05D000747 ORTHO05D001683 6.3e-06 55.5 44 68.2
Nn1g07530 Nelumbo nucifera HOM05D000747 ORTHO05D001683 6.3e-06 55.5 143 37.1
Potri.001G368600 Populus trichocarpa HOM05D000747 ORTHO05D001683 6.3e-06 55.5 122 39.3
Duzib213G0084 Durio zibethinus HOM05D000747 ORTHO05D001683 8.2e-06 55.1 117 41.0
Gorai.002G100900 Gossypium raimondii HOM05D000747 ORTHO05D001683 8.2e-06 55.1 121 40.5


User provided reference genes

Program Settings